Justin D Faris
Cereal Crops Research
Research Geneticist (Plants)
Phone: (701) 239-1339
Fax: (701) 239-1369
USDA,ARS,NCSL
1307 18TH ST N
FARGO, ND 581022765
Publications
(Clicking on the reprint icon
will take you to the publication reprint.)
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Meta-QTL analysis of tan spot resistance in wheat
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(Peer Reviewed Journal)
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Liu, Y., Salsman, E., Wang, R., Galagedara, N., Zhang, Q., Fiedler, J.D., Liu, Z., Xu, S.S., Faris, J.D., Li, X. 2020. Meta-QTL analysis of tan spot resistance in wheat. Theoretical and Applied Genetics. 133:2363-2375. https://doi.org/10.1007/s00122-020-03604-1.
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Plant genes hijacked by necrotrophic fungal pathogens
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Faris, J.D., Friesen, T.L. 2020. Plant genes hijacked by necrotrophic fungal pathogens. Current Opinion in Plant Biology. 56:74-80. https://doi.org/10.1016/j.pbi.2020.04.003.
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Genome-wide association mapping of tan spot resistance in a worldwide collection of durum wheat
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(Peer Reviewed Journal)
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Galagedara, N., Liu, Y., Fiedler, J.D., Shi, G., Chao, S., Xu, S.S., Faris, J.D., Li, X., Liu, Z. 2020. Genome-wide association mapping of tan spot resistance in a worldwide collection of durum wheat. Theoretical and Applied Genetics. 133:2227–2237. https://doi.org/10.1007/s00122-020-03593-1.
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Allelic variation of Sr13 in tetraploid wheat revealed by marker and sequencing analysis
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(Abstract Only)
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Variation analysis of root system development in wheat seedlings using a root phenotyping system
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(Peer Reviewed Journal)
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Adeleke, E., Millas, R., McNeal, W., Faris, J.D., Taheri, A. 2020. Variation analysis of root system development in wheat seedlings using a root phenotyping system. Agronomy. 10(2):206. https://doi.org/10.3390/agronomy10020206.
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Evidence of local adaptation and regional effector repertoires in Parastagonospora nodorum
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(Abstract Only)
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Mapping and characterization of yield component traits in cultivated emmer and durum wheat
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Peters Haugrud, A.R., Green, A.J., Xu, S.S., Faris, J.D. 2020. Mapping and characterization of yield component traits in cultivated emmer and durum wheat [abstract]. Plant and Animal Genome Conference XXVIII. PO0925.
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Using forward and reverse genetics to clone the septoria nodorum blotch susceptibility gene Snn5 in wheat
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(Abstract Only)
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Running, K., Sharma, S., Xu, S.S., Friesen, T.L., Faris, J.D. 2020. Using forward and reverse genetics to clone the septoria nodorum blotch susceptibility gene Snn5 in wheat [abstract]. Plant and Animal Genome Conference XXVIII. PO0945.
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Development and Validation of Semi-Thermal Asymmetric Reverse PCR Markers for Ug99-effective Stem Rust Resistance Genes in Wheat
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(Abstract Only)
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Zhang, J., Long, Y., Gill, B.K., Sharma, J.S., Zhang, Q., Klindworth, D.L., Cai, X., Friesen, T.L., Faris, J.D., Xu, S.S. 2020. Development and Validation of Semi-Thermal Asymmetric Reverse PCR Markers for Ug99-effective Stem Rust Resistance Genes in Wheat [abstract]. Plant and Animal Genome Conference XXVII. PO0941.
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A novel class of homoeologous genes targeted by a fungal necrotrophic effector triggers disease susceptibility in wheat
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Zhang, Z., Running, K., Seneviratne, S., Peters Haugrud, A., Brueggeman, R., Szabo-Hever, A., Xu, S.S., Friesen, T.L., Faris, J.D. 2020. A novel class of homoeologous genes targeted by a fungal necrotrophic effector triggers disease susceptibility in wheat [abstract]. Plant and Animal Genome Conference XXVIII. W1106.
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Identification of a major dominant gene for race-nonspecific tan spot resistance in wild emmer wheat
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(Peer Reviewed Journal)
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Faris, J.D., Overlander, M., Kariyawasam, G.K., Carter, A., Xu, S.S., Liu, Z. 2019. Identification of a major dominant gene for race-nonspecific tan spot resistance in wild emmer wheat. Theoretical and Applied Genetics. 133:829-841. https://doi.org/10.1007/s00122-019-03509-8.
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Molecular characterization of Hessian fly resistance genes in Aegilops tauschii
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(Abstract Only)
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Long, Y., Zhang, Q., Anderson, K.M., Yu, G., Arora, S., Steuernagel, B., Luo, M., Cai, X., Gu, Y.Q., Wuddineh, W., Faris, J.D., Chen, M., Xu, S.S., Wulff, B.H., Lagudah, E.S., Harris, M.O. 2020. Molecular characterization of Hessian fly resistance genes in Aegilops tauschii [abstract]. Plant and Animal Genome Conference XXVIII. W809.
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Comprehensive analysis of Q gene near isogenic lines reveals key molecular pathways for wheat domestication and improvement
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(Peer Reviewed Journal)
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Zhang, Z., Li, A., Song, G., Geng, S., Gill, B.S., Faris, J.D., Mao, L. 2019. Comprehensive analysis of Q gene near isogenic lines reveals key molecular pathways for wheat domestication and improvement. Plant Journal. 102:299-310. https://doi.org/10.1111/tpj.14624.
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QTL mapping of resistance to tan spot induced by race 2 of Pyrenophora tritici-repentis in tetraploid wheat
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(Peer Reviewed Journal)
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Liu, Y., Salsman, E., Fiedler, J.D., Hegstad, J.B., Liu, Z., Faris, J.D., Xu, S.S., Li, X. 2019. QTL mapping of resistance to tan spot induced by race 2 of Pyrenophora tritici-repentis in tetraploid wheat. Theoretical and Applied Genetics. 133:433-442. https://doi.org/10.1007/s00122-019-03474-2.
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Mapping and characterization of two stem rust resistance genes derived from cultivated emmer wheat accession PI 193883
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(Peer Reviewed Journal)
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Sharma, J.S., Zhang, Q., Rouse, M.N., Klindworth, D.L., Friesen, T.L., Long, Y., Olivera, P.D., Jin, Y., McClean, P.E., Xu, S.S., Faris, J.D. 2019. Mapping and characterization of two stem rust resistance genes derived from cultivated emmer wheat accession PI 193883. Theoretical and Applied Genetics. https://doi.org/10.1007/s00122-019-03417-x.
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Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States
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(Peer Reviewed Journal)
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Richards, J.K., Stukenbrock, E.H., Carpenter, J., Liu, Z., Cowger, C., Faris, J.D., Friesen, T.L. 2019. Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States. PLoS Genetics. 15(10):e1008223. https://doi.org/10.1371/journal.pgen.1008223.
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Genome-wide association mapping identifies SnTox5 in Parastagonospora nodorum
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(Abstract Only)
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A necrotrophic effector from Parastagonospora nodorum triggers programmed cell death by targeting two distinct non-homoeologous wheat sensitivity genes
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Identification of a candidate gene for a QTL for spikelet number per spike on wheat chromosome arm 7AL by high-resolution genetic mapping
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(Peer Reviewed Journal)
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Kuzay, S., Xu, Y., Zhang, J., Katz, A., Pearce, S., Su, Z., Fraser, M., Anderson, J.A., Brown Guedira, G.L., Dewitt, N., Peters Haugrud, A., Faris, J.D., Akhunov, E., Bai, G., Dubcovsky, J. 2019. Identification of a candidate gene for a QTL for spikelet number per spike on wheat chromosome arm 7AL by high-resolution genetic mapping. Theoretical and Applied Genetics. https://doi.org/10.1007/s00122-019-03382-5.
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Genome wide association in Parastagonospora nodorum identifies novel necrotrophic effectors with unique characteristics
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(Abstract Only)
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A tale of three wheat genes reveals the ability of a necrotrophic pathogen to bamboozle diverse host targets
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Faris, J.D., Zhang, Z., Friesen, T.L. 2019. A tale of three wheat genes reveals the ability of a necrotrophic pathogen to bamboozle diverse host targets [abstract]. 1st International Wheat Congress. July 21-26, 2019. Saskatoon, Saskatchewan, Canada. Abstract No. 019196.
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Identification of QTL for Yield Components and Seed Morphology in three Durum × Cultivated Emmer Populations
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Peters Haugrud, A.R., Friesen, T.L., Faris, J.D. 2019. Identification of QTL for Yield Components and Seed Morphology in three Durum × Cultivated Emmer Populations [abstract]. 1st International Wheat Congress. July 21-26, 2019. Saskatoon, Saskatchewan, Canada. Poster No. P208.
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High-resolution mapping of the septoria nodorum blotch susceptibility gene Snn2 in wheat
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(Abstract Only)
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Seneviratne, S., Friesen, T.L., Faris, J.D. 2019. High-resolution mapping of the septoria nodorum blotch susceptibility gene Snn2 in wheat [abstract]. 1st International Wheat Congress. July 21-26, 2019. Saskatoon, Saskatchewan, Canada. Poster No. P183.
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Toward the molecular cloning of a septoria nodorum blotch susceptibility gene in durum wheat
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(Abstract Only)
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Running, K.L., Sharma, S., Xu, S.S., Friesen, T.L., Faris, J.D. 2019. Toward the molecular cloning of a septoria nodorum blotch susceptibility gene in durum wheat [abstract]. 1st International Wheat Congress. July 21-26, 2019. Saskatoon, Saskatchewan, Canada. Poster No. P179.
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Nested loop PCR (NL-PCR) for amplification of large DNA fragments with complex structures in wheat [Abstract]
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Long, Y., Sun, Q., Steuernagel, B., Cai, X., Faris, J.D., Harris, M.O., Wulff, B.B., Lagudah, E.S., Xu, S.S. 2019. Nested loop PCR (NL-PCR) for amplification of large DNA fragments with complex structures in wheat [Abstract]. 1st International Wheat Congress. July 21-26, 2019. Saskatoon, Saskatchewan, Canada. Poster No. P048.
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Genetic Diversity and Selective Sweep Analysis of Tetraploid Wheat Populations with Different Levels of Domestication and Adaptation
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Fiedler, J.D., Liu, Y., Xu, S.S., Faris, J.D., Elias, E., Li, X. 2019. Genetic Diversity and Selective Sweep Analysis of Tetraploid Wheat Populations with Different Levels of Domestication and Adaptation [abstract]. 1st International Wheat Congress. July 21-26, 2019. Saskatoon, Saskatchewan, Canada. Poster No. P394.
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A single necrotrophic effector from Parastagonospora nodorum has two susceptibility targets in wheat
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Genetic analysis of threshability and other spike traits in the evolution of cultivated emmer to fully domesticated durum wheat
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(Peer Reviewed Journal)
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Sharma, J.S., Running, K.L., Xu, S.S., Zhang, Q., Peters, A.R., Sharma, S., McClean, P.E., Faris, J.D. 2019. Genetic analysis of threshability and other spike traits in the evolution of cultivated emmer to fully domesticated durum wheat. Molecular Genetics and Genomics. 294(3):757-771. https://doi.org/10.1007/s00438-019-01544-0.
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Genetics of variable disease expression conferred by inverse gene-for-gene interactions in the wheat-Parastagonospora nodorum pathosystem
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(Peer Reviewed Journal)
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Peters Haugrud, A.R., Zhang, Z., Richards, J.K., Friesen, T.L., Faris, J.D. 2019. Genetics of variable disease expression conferred by inverse gene-for-gene interactions in the wheat-Parastagonospora nodorum pathosystem. Plant Physiology. 180(1):420-434. https://doi.org/10.1104/pp.19.00149.
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Durum wheat genome highlights past domestication signatures and future improvement targets
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(Peer Reviewed Journal)
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Maccaferri, M., Harris, N.S., Twardziok, S.O., Gundlach, H., Spannagl, M., Ormanbekova, D., Lux, T., Prade, V., Milner, S., Himmelbach, A., Chao, S., Faris, J.D., Xu, S.S. 2019. Durum wheat genome highlights past domestication signatures and future improvement targets. Nature Genetics. 51(5):885-895. https://doi.org/10.1038/s41588-019-0381-3.
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Genetic diversity and resistance to Fusarium head blight in synthetic hexaploid wheat derived from Aegilops tauschii and diverse Triticum turgidum subspecies
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(Peer Reviewed Journal)
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Szabo-Hever, A., Zhang, Q., Friesen, T.L., Shaobin, Z., Elias, E.M., Cai, X., Jin, Y., Faris, J.D., Chao, S., Xu, S.S. 2018. Genetic diversity and resistance to Fusarium head blight in synthetic hexaploid wheat derived from Aegilops tauschii and diverse Triticum turgidum subspecies. Frontiers in Plant Science. https://doi.org/10.3389/fpls.2018.01829.
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Fusarium graminearum KP4-like proteins possess root growth-inhibiting activity against wheat and potentially contribute to fungal virulence in seedling rot
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(Peer Reviewed Journal)
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Lu, S., Faris, J.D. 2019. Fusarium graminearum KP4-like proteins possess root growth-inhibiting activity against wheat and potentially contribute to fungal virulence in seedling rot. Fungal Genetics and Biology. 123:1-13. https://doi.org/10.1016/j.fgb.2018.11.002.
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Molecular cloning and comparative analysis of a PR-1-RK hybrid gene from Triticum urartu, the A-genome progenitor of hexaploid wheat
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(Peer Reviewed Journal)
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Lu, S., Faris, J.D., Edwards, M.C. 2018. Molecular cloning and comparative analysis of a PR-1-RK hybrid gene from Triticum urartu, the A-genome progenitor of hexaploid wheat. Plant Molecular Biology. https://doi.org/10.1007/s11105-018-1098-7.
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ToxA is present in the U.S. Bipolaris sorokiniana population and is a significant virulence factor on wheat harboring Tsn1
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(Peer Reviewed Journal)
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Friesen, T.L., Holmes, D.J., Bowden, R.L., Faris, J.D. 2018. ToxA is present in the U.S. Bipolaris sorokiniana population and is a significant virulence factor on wheat harboring Tsn1. Plant Disease. 102(12):2446-2452. Plant Dis. 102:2446-2452.
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Identification, mapping, and marker development of stem rust resistance genes in durum wheat 'Lebsock'
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(Peer Reviewed Journal)
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Saini, J., Faris, J.D., Zhang, Q., Rouse, M.N., Jin, Y., Long, Y., Klindworth, D.L., Elias, E.M., McClean, P.E., Edwards, M.C., Xu, S.S. 2018. Identification, mapping, and marker development of stem rust resistance genes in durum wheat 'Lebsock'. Molecular Breeding. 38:77. https://doi.org/10.1007/s11032-018-0833-y.
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Identification and validation of a new source of low grain cadmium accumulation in durum wheat
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(Peer Reviewed Journal)
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Abbasabadi, A.O., Kumar, A., Pirseyedi, S., Salsman, E., Dobrydina, M., Poudel, R.S., Abuhammad, W.A., Chao, S., Faris, J.D., Elias, E.M. 2018. Identification and validation of a new source of low grain cadmium accumulation in durum wheat. G3, Genes/Genomes/Genetics. 8:923-932.
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Reference quality genome assemblies of three Parastagonospora nodorum isolates differing in virulence on wheat
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(Peer Reviewed Journal)
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Richards, J.K., Wyatt, N.A., Liu, Z., Faris, J.D., Friesen, T.L. 2018. Reference quality genome assemblies of three Parastagonospora nodorum isolates differing in virulence on wheat. G3, Genes/Genomes/Genetics. 8:393-399. https://doi.org/10.1534/g3.117.300462.
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STARP: A user-friendly and broadly applicable technique for SNP genotyping in wheat and other crops
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(Abstract Only)
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Long, Y., Qi, L., Cai, X., Faris, J.D., Xu, S.S. 2018. STARP: A user-friendly and broadly applicable technique for SNP genotyping in wheat and other crops. Plant and Animal Genome Conference. Available: https://plan.core-apps.com/pag_2018/abstract/fff6e3855de940b33de03bc4efb58e64
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Identification and molecular mapping of quantitative trait loci for resistance to Fusarium head blight in cultivated emmer PI 272527
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(Abstract Only)
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Zhang, Q., Faris, J.D., Chao, S., Friesen, T.L., Zhong, S., Cai, X., Elias, E.M., Xu, S.S. 2017. Identification and molecular mapping of quantitative trait loci for resistance to Fusarium head blight in cultivated emmer PI 272527 [abstract]. In: Proceedings of the 2017 National Fusarium Head Blight Forum. December 3-5, 2017, Milwaukee, Wisconsin. p. 97.
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A major tan spot race-nonspecific resistance gene in tetraploid and hexaploid wheat
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(Abstract Only)
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Faris, J.D., Overlander, M., Kariyawasam, G.K., Carter, A.H., Liu, Z. 2018. A major tan spot race-nonspecific resistance gene in tetraploid and hexaploid wheat [abstract]. Plant and Animal Genome Conference XXVI. January 13-17, 2018, San Diego, CA. P1080.
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Differential expression of the necrotrophic effector gene SnTox1 in the pathogen Parastagonospora nodorum
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Peters, A.R., Friesen, T.L., Faris, J.D. 2018. Differential expression of the necrotrophic effector gene SnTox1 in the pathogen Parastagonospora nodorum. Plant and Animal Genome Conference XXVI. January 13-17, 2018, San Diego, CA. P1081.
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Molecular manipulation of the mating-type system and development of a new approach for characterizing pathogen virulence in Pyrenophora tritici-repentis
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(Peer Reviewed Journal)
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Ameen, G., Kariyawasam, G., Shi, G., Friesen, T.L., Faris, J.D., Ali, S., Rasmussen, J.B., Liu, Z. 2017. Molecular manipulation of the mating-type system and development of a new approach for characterizing pathogen virulence in Pyrenophora tritici-repentis. Fungal Genetics and Biology. 109:16-25. https://doi.org/10.1016/j.fgb.2017.10.004.
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Discovery of a novel stem rust resistance allele in durum wheat that exhibits differential reactions to Ug99 isolates
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(Peer Reviewed Journal)
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Nirmala, J., Saini, J., Newcomb, M., Olivera, P., Gale, S.W., Klindworth, D.L., Elias, E., Talbert, L., Chao, S., Faris, J.D., Xu, S.S., Jin, Y., Rouse, M.N. 2017. Discovery of a novel stem rust resistance allele in durum wheat that exhibits differential reactions to Ug99 isolates. G3, Genes/Genomes/Genetics. 7:3481-3490.
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Discovery of a novel stem rust resistance allele in durum wheat that exhibits differential reactions to Ug99 isolates
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(Peer Reviewed Journal)
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Nirmala, J., Saini, J., Newcomb, M., Olivera, P., Gale, S.W., Klindworth, D.L., Elias, E., Talbert, L., Chao, S., Faris, J.D., Xu, S.S., Jin, Y., Rouse, M.N. 2017. Discovery of a novel stem rust resistance allele in durum wheat that exhibits differential reactions to Ug99 isolates. G3, Genes/Genomes/Genetics. https://doi.org/10.1534/g3.117.300209.
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Genetic analysis of virulence in the Pyrenophora teres f. teres population BB25 x FGOH04Ptt021
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(Peer Reviewed Journal)
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Koladia, V.M., Richards, J.K., Wyatt, N.A., Faris, J.D., Brueggeman, R.S., Friesen, T.L. 2017. Genetic analysis of virulence in the Pyrenophora teres f. teres population BB25 x FGOH04Ptt021. Fungal Genetics and Biology. 107:12-19. https://doi.org/10.1016/j.fgb.2017.07.003.
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Wild emmer genome architecture and diversity elucidate wheat evolution and domestication
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(Peer Reviewed Journal)
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Avni, R., Nave, M., Barad, O., Baruch, K., Twardziok, S.O., Gundlach, H., Hale, I., Mascher, M., Spannagl, M., Wiebe, K., Jordan, K.W., Golan, G., Deek, J., Ben-Zvi, B., Ben-Zvi, G., Himmelbach, A., MacLachlan, R.P., Sharpe, A.G., Fritz, A., Ben-David, R., Budak, H., Fahima, T., Korol, A., Faris, J.D., Hernandez, A., Mikel, M.A., Levy, A.A., Steffenson, B., Maccaferri, M., Tuberosa, R., Cattivelli, L., Faccioli, P., Ceriotti, A., Kashkush, K., Pourkheirandish, M., Komatsuda, T., Eilam, T., Sela, H., Sharon, A., Ohad, N., Chamovitz, D.A., Mayer, K.F.X., Stein, N., Ronen, G., Peleg, Z., Pozniak, C.J., Akhunov, E.D., Distelfeld, A. 2017. Wild emmer genome architecture and diversity elucidate wheat evolution and domestication. Science. 357:93-97.
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Characterizing the Pyrenophora teres f. maculata – barley interaction using pathogen genetics
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(Peer Reviewed Journal)
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Carlsen, S.A., Neupane, A., Wyatt, N.A., Richards, J.K., Faris, J.D., Xu, S.S., Brueggeman, R.S., Friesen, T.L. 2017. Characterizing the Pyrenophora teres f. maculata – barley interaction using pathogen genetics. G3: Genes, Genomes, Genetics. 7(8):2615-2626. 10.1534/g3.117.043265.
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MicroRNA172 plays a critical role in wheat spike morphogenesis and grain threshability
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(Peer Reviewed Journal)
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Debernardi, J.M., Lin, H., Chuck, G., Faris, J.D., Dubcovsky, J. 2017. MicroRNA172 plays a critical role in wheat spike morphogenesis and grain threshability. Development. 144:1966-1975.
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Inverse gene-for-gene interactions contribute additively to tan spot susceptibility in wheat
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(Peer Reviewed Journal)
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Liu, Z., Zurn, J.D., Kariyawasam, G., Faris, J.D., Shi, G., Hansen, J., Rasmussen, J.B., Acevedo, M. 2017. Inverse gene-for-gene interactions contribute additively to tan spot susceptibility in wheat. Theoretical and Applied Genetics. 130:1267-1276. doi: 10.1007/s00122-017-2886-4.
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Physical mapping of DNA markers linked to stem rust resistance gene Sr47 in durum wheat
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(Peer Reviewed Journal)
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Klindworth, D.L., Saini, J., Long, Y., Rouse, M.N., Faris, J.D., Jin, Y., Xu, S.S. 2017. Physical mapping of DNA markers linked to stem rust resistance gene Sr47 in durum wheat. Theoretical and Applied Genetics. 130:1135-1154. doi: 10.1007/s00122-017-2875-7.
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Molecular cloning and characterization of two novel genes from hexaploid wheat that encode double PR-1 domains coupled with a receptor-like protein kinase
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(Peer Reviewed Journal)
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Lu, S., Faris, J.D., Edwards, M.C. 2017. Molecular cloning and characterization of two novel genes from hexaploid wheat that encode double PR-1 domains coupled with a receptor-like protein kinase. Molecular Genetics and Genomics. 292:435-452. doi:10.1007/s00438-017-1287-3.
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Toward the molecular cloning of the Septoria nodorum blotch susceptibility gene Snn2 in wheat
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(Abstract Only)
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Seneviratne, S., Friesen, T.L., Faris, J.D. 2017. Toward the molecular cloning of the Septoria nodorum blotch susceptibility gene Snn2 in wheat [abstract]. Plant & Animal Genome Conference, January 14-18, 2017, San Diego, CA.
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Quantification of disease expression conferred by three host gene-necrotrophic effector interactions in the wheat-Parastagonospora nodorum pathosystem
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(Abstract Only)
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Peters, A.R., Friesen, T.L., Faris, J.D. 2017. Quantification of disease expression conferred by three host gene-necrotrophic effector interactions in the wheat-Parastagonospora nodorum pathosystem [abstract]. Plant and Animal Genome Conference, January 14-18, 2017, San Diego, CA.
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Fine mapping of the chromosome 5B region carrying closely linked rust resistance genes Yr47 and Lr52 in wheat
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(Peer Reviewed Journal)
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Qureshi, N., Bariana, H., Forrest, K., Hayden, M., Keller, B., Wicker, T., Faris, J.D., Salina, E., Bansal, U. 2017. Fine mapping of the chromosome 5B region carrying closely linked rust resistance genes Yr47 and Lr52 in wheat. Theoretical and Applied Genetics. 130:495-504.
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New insights into the roles of host gene-necrotrophic effector interactions in governing susceptibility of durum wheat to tan spot and Septoria nodorum blotch
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(Peer Reviewed Journal)
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Virdi, S.K., Liu, Z., Overlander, M., Zhang, Z., Xu, S.S., Friesen, T.L., Faris, J.D. 2016. New insights into the roles of host gene-necrotrophic effector interactions in governing susceptibility of durum wheat to tan spot and Septoria nodorum blotch. Genes, Genomes, Genetics. 6:4139-4150. doi: 10.1534/g3.116.036525.
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The hijacking of a receptor kinase-driven pathway by a wheat fungal pathogen leads to disease
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(Peer Reviewed Journal)
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Shi, G., Zhang, Z., Friesen, T.L., Raats, D., Fahima, T., Brueggeman, R.S., Lu, S., Trick, H.N., Liu, Z., Chao, W., Frenkel, Z., Xu, S.S., Rasmussen, J.B., Faris, J.D. 2016. The hijacking of a receptor kinase-driven pathway by a wheat fungal pathogen leads to disease. Science Advances. 2:e1600822.
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Genetic analysis of net form net blotch resistance in barley lines CIho 5791 and Tifang against a global collection of P.teres f. teres isolates
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(Peer Reviewed Journal)
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Koladia, V.M., Faris, J.D., Richards, J.K., Brueggeman, R.S., Chao, S., Friesen, T.L. 2016. Genetic analysis of net form net blotch resistance in barley lines CIho 5791 and Tifang against a global collection of P.teres f. teres isolates. Theoretical and Applied Genetics. 130:163-173. doi: 10.1007/s00122-016-2801-4.
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Unraveling the genetics of wheat-necrotrophic pathogen interactions reveals a conundrum
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(Abstract Only)
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Faris, J.D., Friesen, T.L., Liu, Z., Xu, S.S. 2016. Unraveling the genetics of wheat-necrotrophic pathogen interactions reveals a conundrum [abstract]. Durable Wheat Resistance Meeting, November 2-3, 2016, Minneapolis, MN.
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Quantification of disease expression conferred by three host gene-necrotrophic effector interactions in the wheat-Parastagonospora nodorum pathosystem
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(Abstract Only)
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Peters, A.R., Friesen, T.L., Faris, J.D. 2016. Quantification of disease expression conferred by three host gene-necrotrophic effector interactions in the wheat-Parastagonospora nodorum pathosystem [abstract]. Durable Wheat Resistance Meeting, November 2-3, 2016, Minneapolis, MN.
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Genomic analysis and tools for the Septoria nodorum blotch susceptibility gene Snn2 in wheat
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(Abstract Only)
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Seneviratne, S., Friesen, T.L., Faris, J.D. 2016. Genomic analysis and tools for the Septoria nodorum blotch susceptibility gene Snn2 in wheat [abstract]. Durable Wheat Resistance Meeting, November 2-3, 2016, Minneapolis, MN.
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Genomic analysis of a novel gene conferring resistance to Ug99 stem rust in Triticum turgidum ssp. dicoccum
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(Abstract Only)
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Saini, J., Xu, S.S., Rouse, M.N., Chao, S., Long, Y., Mcclean, P., Faris, J.D. 2016. Genomic analysis of a novel gene conferring resistance to Ug99 stem rust in Triticum turgidum ssp. dicoccum [abstract]. Durable Wheat Resistance Meeting, November 2-3, 2016, Minneapolis, MN.
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Validation of genome-wide association studies as a tool to identify virulence factors in Parastagonospora nodorum
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(Peer Reviewed Journal)
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Gao, Y., Liu, Z., Faris, J.D., Richards, J., Brueggeman, R.S., Li, X., Oliver, R.P., McDonald, B.A., Friesen, T.L. 2016. Validation of genome-wide association studies as a tool to identify virulence factors in Parastagonospora nodorum. Phytopathology. 106(10):1177-1185.
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SnTox1, a Parastagonospora nodorum necrotrophic effector, is a dual function protein that facilitates infection while protecting from wheat-produced chitinases
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(Peer Reviewed Journal)
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Liu, Z., Gao, Y., Kim, Y.M., Faris, J.D., Shelver, W.L., de Wit, P.J.G.M., Xu, S.S., Friesen, T.L. 2016. SnTox1, a Parastagonospora nodorum necrotrophic effector, is a dual-function protein that facilitates infection while protecting from wheat-produced chitinases. New Phytologist. 211:1052-1064. doi: 10.1111/nph.13959.
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Genetic relationships between race-nonspecific and race-specific interactions in the wheat-Pyrenophora tritici-repentis pathosystem
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(Peer Reviewed Journal)
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Kariyawasam, G.K., Carter, A.H., Rasmussen, J.B., Faris, J., Xu, S.S., Mergoum, M., Liu, Z. 2016. Genetic relationships between race-nonspecific and race-specific interactions in the wheat-Pyrenophora tritici-repentis pathosystem. Theoretical and Applied Genetics. 129:897-908. doi: 10.1007/s00122-016-2670-x.
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Genome mapping
()
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Tiwari, V.K., Faris, J.D., Friebe, B., Gill, B.S. 2016. Genome mapping. In: Wrigley, C., Walker, C.E., Corke, H., editors. Encyclopedia of Grain Science. Waltham, MA: Academic Press. pp. 365-375.
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Genetic mapping of major-effect seed dormancy quantitative trait loci on chromosome 2B using recombinant substitution lines in tetraploid wheat
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(Peer Reviewed Journal)
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Chao, S., Elias, E., Benscher, D., Ishikawa, G., Huang, Y.-F., Saito, M., Nakamura, T., Xu, S., Faris, J., Sorrells, M. 2016. Genetic mapping of major-effect seed dormancy quantitative trait loci on chromosome 2B using recombinant substitution lines in tetraploid wheat. Crop Science. 56:59-72.
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Development of a diagnostic co-dominant marker for stem rust resistance gene Sr47 introgressed from Aegilops speltoides into durum wheat
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(Peer Reviewed Journal)
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Yu, G., Klindworth, D.L., Friesen, T.L., Faris, J.D., Zhong, S., Rasmussen, J.B., Xu, S.S. 2015. Development of a diagnostic co-dominant marker for stem rust resistance gene Sr47 introgressed from Aegilops speltoides into durum wheat. Theoretical and Applied Genetics. 128:2367-2374.
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Marker development, saturation mapping, and high-resolution mapping of the Septoria nodorum blotch susceptibility gene Snn3-B1 in wheat
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(Peer Reviewed Journal)
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Shi, G., Zhang, Z., Friesen, T.L., Bansal, U., Cloutier, S., Wicker, T., Rasmussen, J.B., Faris, J.D. 2016. Marker development, saturation mapping, and high-resolution mapping of the Septoria nodorum blotch susceptibility gene Snn3-B1 in wheat. Molecular Genetics and Genomics. 291:107-119.
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The wheat Snn7 gene confers susceptibility upon recognition of the Parastagonospora nodorum necrotrophic effector SnTox7
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(Peer Reviewed Journal)
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Shi, G., Friesen, T.L., Jyoti Saini, Xu, S.S., Rasmussen, J.B., Faris, J.D. 2015. The wheat Snn7 gene confers susceptibility on recognition of the Parastagonospora nodorum necrotrophic effector SnTox7. The Plant Genome. 8. doi: 10.3835/plantgenome2015.02.0007.
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Development of genetic and genomic resources for target breeding in durum wheat
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(Abstract Only)
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Xu, S.S., Chao, S., Faris, J.D., Friesen, T.L., Liu, Z., Jin, Y., Rouse, M.N., Elias, E.M. 2015. Development of genetic and genomic resources for target breeding in durum wheat [abstract]. From Seed to Pasta & Beyond: A Sustainable Durum Wheat Chain for Food Security and Healthy Lives, May 31-June 3, 2015, Bologna Italy.
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Identification and characterization of the SnTox6-Snn6 interaction in the Parastagonospora nodorum-wheat pathosystem
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(Peer Reviewed Journal)
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Gao, Y., Faris, J.D., Liu, Z., Kim, Y.M., Syme, R.A., Oliver, R.P., Xu, S.S., Friesen, T.L. 2015. Identification and characterization of the SnTox6-Snn6 interaction in the Parastagonospora nodorum-wheat pathosystem. Molecular Plant-Microbe Interactions. 28(5):615-625.
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Identification and mapping of quantitative trait loci for Fusarium head blight resistance in emmer and durum wheat
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(Abstract Only)
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Zhang, Q., Axtman, J.E., Faris, J.D., Chao, S., Zhang, Z., Friesen, T.L., Zhong, S., Cai, X., Elias, E.M., Xu, S.S. 2014. Identification and mapping of quantitative trait loci for Fusarium head blight resistance in emmer and durum wheat [abstract]. In: Canty, S., Clark, A., Turcott, N., Van Sanford, D., editors. Proceedings of the National Fusarium Head Blight Forum, East Lansing, MI/Lexington, KY: U.S. Wheat & Barley Scab Initiative, December 7-9, 2014, St. Louis, MO. p. 102.
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Genome-wide association mapping of susceptibility to Stagonospora nodorum blotch in emmer wheat
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(Abstract Only)
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Sun, Q., Chao, S., Friesen, T.L., Faris, J.D., Xu, S.S. 2015. Genome-wide association mapping of susceptibility to Stagonospora nodorum blotch in emmer wheat. Plant & Animal Genome XXIII, January 10-14, 2015, San Diego, CA. Available: https://pag.confex.com/pag/xxiii/webprogram/Paper16321.html.
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Targeted introgression of stem rust Ug99 resistance from wheatgrasses into pasta and bread wheat
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(Abstract Only)
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Xu, S.S., Friesen, T.L., Chao, S., Jin, Y., Rouse, M.N., Faris, J.D., Cai, X. 2015. Targeted introgression of stem rust Ug99 resistance from wheatgrasses into pasta and bread wheat [abstract]. Plant & Animal Genome XXIII, January 10-14, 2015, San Diego, CA. Available: https://pag.confex.com/pag/xxiii/webprogram/Paper14596.html.
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Identification and molecular mapping of quantitative trait loci for Fusarium head blight resistance in emmer and durum wheat using a single nucleotide polymorphism-based linkage map
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(Peer Reviewed Journal)
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Zhang, Q., Axtman, J.E., Faris, J.D., Chao, S., Zhang, Z., Friesen, T.L., Zhong, S., Cai, X., Elias, E.M., Xu, S.S. 2014. Identification and molecular mapping of quantitative trait loci for Fusarium head blight resistance in emmer and durum wheat using a single nucleotide polymorphism-based linkage map. Molecular Breeding. 34:1677-1687.
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A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding
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(Peer Reviewed Journal)
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Maccaferri, M., Ricci, A., Salvi, S., Milner, S.G., Noli, E., Martelli, P.L., Casadio, R., Akhunov, E., Scalabrin, S., Vendramin, V., Ammar, K., Blanco, A., Desiderio, F., Distelfeld, A., Dubcovsky, J., Fahima, T., Faris, J.D., Korol, A., Massi, A., Mastrangelo, A.M., Morgante, M., Pozniak, C., N'Diaye, A., Xu, S., Tuberosa, R. 2015. A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding. Plant Biotechnology Journal. 13:648-663.
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Analysis of agronomic and domestication traits in a durum x cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map
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(Peer Reviewed Journal)
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Faris, J.D., Zhang, Q., Chao, S., Zhang, Z., Xu, S.S. 2014. Analysis of agronomic and domestication traits in a durum x cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map. Theoretical and Applied Genetics. 127:2333-2348.
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Evaluation of a Pyrenophora teres f. teres mapping population reveals multiple independent interactions with a region of barley chromosome 6H
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(Peer Reviewed Journal)
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Shjerve, R.A., Faris, J.D., Brueggeman, R.S., Yan, C., Zhu, Y., Koladia, V., Friesen, T.L. 2014. Evaluation of a Pyrenophora teres f. teres mapping population reveals multiple independent interactions with a region of barley chromosome 6H. Fungal Genetics and Biology. 70:104-112.
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Necrotrophic effector-triggered susceptibility (NETS) underlies the barley-Pyrenophora teres f. teres interaction specific to chromosome 6H
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(Peer Reviewed Journal)
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Liu, Z., Holmes, D.J., Faris, J.D., Chao, S., Brueggeman, R., Edwards, M.C., Friesen, T.L. 2015. Necrotrophic effector-triggered susceptibility (NETS) underlies the barley-Pyrenophora teres f. teres interaction specific to chromosome 6H. Molecular Plant Pathology. 16(2):188-200.
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Rewiring the wheat reproductive system to harness heterosis for the next wave of yield improvements
()
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Gornicki, P., Faris, J.D. 2014. Rewiring the wheat reproductive system to harness heterosis for the next wave of yield improvements. Proceedings of the National Academy of Sciences. 111:9024-9025.
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Map-based analysis of the tenacious glume gene Tg-B1 of wild emmer and its role in wheat domestication
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(Peer Reviewed Journal)
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Faris, J.D., Zhang, Z., Chao, S. 2014. Map-based analysis of the tenacious glume gene Tg-B1 of wild emmer and its role in wheat domestication. Gene. 542:198-208.
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 |
Molecular and comparative mapping of genes governing spike compactness inherited from wild emmer wheat
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(Peer Reviewed Journal)
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Faris, J.D., Zhang, Z., Garvin, D.F., Xu, S.S. 2014. Molecular and comparative mapping of genes governing spike compactness inherited from wild emmer wheat. Molecular Genetics and Genomics. 289:641-651.
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 |
A dimeric PR-1-type pathogenesis-related protein interacts with ToxA and potentially mediates ToxA-induced necrosis in sensitive wheat
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(Peer Reviewed Journal)
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Lu, S., Faris, J.D., Sherwood, R., Friesen, T.L., Edwards, M.C. 2014. A dimeric PR-1-type pathogenesis-related protein interacts with ToxA and potentially mediates ToxA-induced necrosis in sensitive wheat. Molecular Plant Pathology. 15(7):650-663.
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New germplasm development using synthetic and other approaches to transfer stem rust resistance from tetraploids to hexaploids
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(Abstract Only)
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Xu, S.S., Zhang, Q.J., Klindworth, D.L., Jin, Y., Rouse, M.N., Friesen, T.L., Cai, X., Faris, J.D. 2014. New germplasm development using synthetic and other approaches to transfer stem rust resistance from tetraploids to hexaploids [abstract]. Borlaug Global Rust Initiative Technical Workshop, March 22-25, 2014, Ciudad Obregon, Mexico.
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Wheat domestication: Key to agricultural revolutions past and future
()
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Faris, J.D. 2014. Wheat domestication: Key to agricultural revolutions past and future. In: Tuberosa, R., Graner, A., Frison, E., editors. Genomics of Plant Genetic Resources. Volume 1. Managing, Sequencing and Mining Genetic Resources. Springer. p. 439-464.
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Chromosome engineering for alien gene introgression in wheat: Progress and prospective
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(Abstract Only)
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Xu, S.S., Niu, Z., Klindworth, D.L., Zhang, Q.J., Chao, S., Friesen, T.L., Jin, Y., Rouse, M.N., Faris, J.D., Cai, X. 2013. Chromosome engineering for alien gene introgression in wheat: Progress and prospective. Triticeae Cytogenetics: Past, Present and Future, September 15-16, 2013, Kyoto, Japan. p. 24-25.
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Genetics of tan spot resistance in wheat
()
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Faris, J.D., Liu, Z.H., Xu, S.S. 2013. Genetics of tan spot resistance in wheat. Theoretical and Applied Genetics. 126:2197-2217.
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Synthetic hexaploids derived from under-exploited tetraploids as a new resource for disease resistance in wheat
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(Abstract Only)
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Xu, S.S., Zhang, Q.J., Jin, Y., Rouse, M.N., Liu, Z.H., Friesen, T.L., Pumphrey, M.O., Cai, X., Faris, J.D. 2013. Synthetic hexaploids derived from under-exploited tetraploids as a new resource for disease resistance in wheat. 12th International Wheat Genetics Symposium, September 8-14, 2013, Yokohama, Japan. p. 107.
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Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat
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(Peer Reviewed Journal)
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Akhunov, E.D., Sehgal, S., Liang, H., Wang, S., Akhunova, A.R., Kaur, G., Li, W., Forrest, K.L., See, D., Simkova, H., Ma, Y., Hayden, M.J., Luo, M., Faris, J.D., Dolezel, J., Gill, B.S. 2013. Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat. Plant Physiology. 161:252-265.
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Investigation of the role of the necrotrophic effector SnTox1 in virulence in the Stagonospora nodorum-wheat interaction
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(Abstract Only)
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Friesen, T.L., Liu, Z.H., Lu, S., Solomon, P.S., Oliver, R.P., Faris, J.D. 2013. Investigation of the role of the necrotrophic effector SnTox1 in virulence in the Stagonospora nodorum-wheat interaction. Plant and Animal Genome Conference, January 12-16, 2013, San Diego, CA.
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 |
Dimerization and protease resistance: new insight into the function of PR-1
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(Peer Reviewed Journal)
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Lu, S., Faris, J.D., Sherwood, R., Edwards, M.C. 2013. Dimerization and protease resistance: new insight into the function of PR-1. Journal of Plant Physiology. 170:105-110.
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 |
SnTox5-Snn5: A novel Stagonospora nodorum effector-wheat gene interaction and its relationship with the SnToxA-Tsn1 and SnTox3-Snn3-B1 interactions
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(Peer Reviewed Journal)
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Friesen, T.L., Chu, C., Xu, S.S., Faris, J.D. 2012. SnTox5-Snn5: A novel Stagonospora nodorum effector-wheat gene interaction and its relationship with the SnToxA-Tsn1 and SnTox3-Snn3-B1 interactions. Molecular Plant Pathology. 13(9):1101-1109.
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Heterologous expression and functional analysis of the wheat group 1 pathogenesis-related (PR-1) proteins
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(Abstract Only)
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Dunnell, K.L., Faris, J.D., Friesen, T.L., Edwards, M.C., Lu, S. 2012. Heterologous expression and functional analysis of the wheat group 1 pathogenesis-related (PR-1) proteins. Meeting Abstract. 102:S4.33.
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Differential expression of the pathogenesis-related protein 1 (PR-1) gene family in stem rust (Puccinia graminis f. sp. tritici )-wheat interactions
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(Abstract Only)
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Lu, S., Friesen, T.L., Faris, J.D. 2012. Differential expression of the pathogenesis-related protein 1 (PR-1) gene family in stem rust (Puccinia graminis f. sp. tritici)-wheat interactions. American Phytopathological Society, August 4-8, 2012, Providence, RI. Available: http://www.apsnet.org/meetings/Documents/2012_Meeting_Abstracts/aps12abP582.htm
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Genetic mapping analysis of bread-making quality traits in spring wheat
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(Peer Reviewed Journal)
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Simons, K., Anderson, J.A., Mergoum, M., Faris, J.D., Klindworth, D.L., Xu, S.S., Sneller, C., Ohm, J.-B., Hareland, G.A., Edwards, M.C., Chao, S. 2012. Genetic mapping analysis of bread-making quality traits in spring wheat. Crop Science. 52:2182-2197.
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Tan spot susceptibility governed by the Tsn1 locus and race-nonspecific resistance quantitative trait loci in a population derived from the wheat lines Salamouni and Katepwa
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(Peer Reviewed Journal)
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Faris, J.D., Abeysekara, N.S., McClean, P.E., Xu, S.S., Friesen, T.L. 2012. Tan spot susceptibility governed by the Tsn1 locus and race-nonspecific resistance quantitative trait loci in a population derived from the wheat lines Salamouni and Katepwa. Molecular Breeding. 30:1669-1678.
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Stagonospora nodorum: From pathology to genomics and host resistance
()
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Oliver, R.P., Friesen, T.L., Faris, J.D., Solomon, P.S. 2012. Stagonospora nodorum: From pathology to genomics and host resistance. Annual Review of Phytopathology. 50:23-43.
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Introgression and characterization of a goatgrass gene for a high level of resistance to Ug99 stem rust in tetraploid wheat
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(Peer Reviewed Journal)
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Klindworth, D.L., Niu, Z., Chao, S., Friesen, T.L., Jin, Y., Faris, J.D., Cai, X., Xu, S.S. 2012. Introgression and characterization of a goatgrass gene for a high level of resistance to Ug99 stem rust in tetraploid wheat. Genes|Genomes|Genetics. 2:665-673.
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Integration of DNA markers with chromosome engineering for efficient introgression of resistance genes from wild grasses into wheat
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(Abstract Only)
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Xu, S.S., Niu, Z., Klindworth, D.L., Chao, S., Friesen, T.L., Faris, J.D., Jin, Y., Cai, X., Harris, M.O. 2012. Integration of DNA markers with chromosome engineering for efficient introgression of resistance genes from wild grasses into wheat. Meeting Abstract. pg 15.
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Quantitative variation in effector activity of ToxA isoforms from Stagonospora nodorum and Pyrenophora tritici-repentis
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(Peer Reviewed Journal)
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Tan, K.C., Ferguson-Hunt, M., Rybak, K., Waters, O.D.C., Stanley, W.A., Bond, C.S., Stukenbrock, E.H., Friesen, T.L., Faris, J.D., McDonald, B.A., Oliver, R.P. 2012. Quantitative variation in effector activity of ToxA isoforms from Stagonospora nodorum and Pyrenophora tritici-repentis. Molecular Plant-Microbe Interactions. 25:515-522.
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The cysteine rich necrotrophic effector SnTox1 produced by Stagonospora nodorum triggers susceptibility of wheat lines harboring Snn1
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(Peer Reviewed Journal)
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Liu, Z., Zhang, Z., Faris, J.D., Oliver, R.P., Syme, R., Mcdonald, M.C., Mcdonald, B.A., Solomon, P.S., Lu, S., Shelver, W.L., Xu, S.S., Friesen, T.L. 2012. The cysteine rich necrotrophic effector SnTox1 produced by Stagonospora nodorum triggers susceptibility of wheat lines harboring Snn1. PLoS Pathogens. 8(1):e1002467.
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Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat
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(Peer Reviewed Journal)
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Zhang, Z., Belcram, H., Gornicki, P., Charles, M., Just, J., Huneau, C., Magdelenat, G., Couloux, A., Samain, S., Gill, B.S., Rasmussen, J.B., Barbe, V., Faris, J.D., Chalhoub, B. 2011. Duplication and partitioning in evolution and function of homoeologous Q loci governing domestication characters in polyploid wheat. Proceedings of the National Academy of Sciences. 108:18737-18742.
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Variable expression of the Stagonospora nodorum effector SnToxA among isolates is correlated with levels of disease susceptibility in wheat
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(Peer Reviewed Journal)
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Faris, J.D., Zhang, Z., Rasmussen, J.B., Friesen, T.L. 2011. Variable expression of the Stagonospora nodorum effector SnToxA among isolates is correlated with levels of disease susceptibility in wheat. Molecular Plant-Microbe Interactions. 24:1419-1426.
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Identification and molecular mapping of two QTLs with major effects for resistance to Fusarium head blight in wheat
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(Peer Reviewed Journal)
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Chu, C., Niu, Z., Zhong, S., Chao, S., Friesen, T.L., Halley, S., Elias, E.M., Dong, Y., Faris, J.D., Xu, S.S. 2011. Identification and molecular mapping of two QTLs with major effects for resistance to Fusarium head blight in wheat. Theoretical and Applied Genetics. 123(7):1107-1119.
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Whole genome QTL analysis of Stagonospora nodorum blotch resistance and validation of the SnTox4-Snn4 interaction in hexaploid wheat
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(Peer Reviewed Journal)
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Abeysekara, N., Faris, J.D., Chao, S., Mcclean, P., Friesen, T.L. 2012. Whole genome QTL analysis of Stagonospora nodorum blotch resistance and validation of the SnTox4-Snn4 interaction in hexaploid wheat. Phytopathology. 102:94-104.
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Molecular characterization and genomic mapping of the pathogenesis-related protein 1 (PR-1) gene family in hexaploid wheat (Triticum aestivum L.)
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(Peer Reviewed Journal)
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Lu, S., Friesen, T.L., Faris, J.D. 2011. Molecular characterization and genomic mapping of the pathogenesis-related protein 1 (PR-1) gene family in hexaploid wheat (Triticum aestivum L.). Molecular Genetics and Genomics. 285:485-503.
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 |
New broad-spectrum resistance to septoria tritici blotch derived from synthetic hexaploid wheat
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(Peer Reviewed Journal)
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Ghaffary, S.T., Faris, J.D., Friesen, T.L., Visser, R.G., Van Der Lee, T.A., Robert, O., Kema, G.H. 2011. New broad-spectrum resistance to septoria tritici blotch derived from synthetic hexaploid wheat. Journal of Theoretical and Applied Genetics. 124:125-142.
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 |
Characterization of plant – fungal interactions involving necrotrophic effector-producing plant pathogens
()
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Friesen, T.L., Faris, J.D. 2012. Characterization of plant – fungal interactions involving necrotrophic effector-producing plant pathogens. In: Bolton, M.D., Thomma, B.P.H.J. editors. Plant Fungal Pathogens: Methods and Protocols. New York, NY: Humana Press. p. 191-207.
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Chromosome engineering of wheat stem rust resistance gene Sr47 in a tetraploid wheat background
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(Abstract Only)
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Klindworth, D.L., Niu, Z., Chao, S., Friesen, T.L., Faris, J.D., Jin, Y., Cai, X., Xu, S.S. 2011. Chromosome engineering of wheat stem rust resistance gene Sr47 in a tetraploid wheat background. Meeting Abstract. pg. 182.
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 |
Fighting against FHB – an excellent novel resistance source for future wheat breeding
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(Abstract Only)
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Chu, C., Zhong, S., Chao, S., Friesen, T.L., Halley, S., Elias, E.M., Faris, J.D., Xu, S.S. 2010. Fighting against FHB – an excellent novel resistance source for future wheat breeding. Meeting Abstract. pg. 14.
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Marker Development and Saturation Mapping of the Tan Spot Ptr ToxB Sensitivity locus Tsc2 in Hexaploid Wheat
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(Peer Reviewed Journal)
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Abeysekara, N.S., Friesen, T.L., Liu, Z., Mcclean, P.E., Faris, J.D. 2010. Marker Development and Saturation Mapping of the Tan Spot Ptr ToxB Sensitivity locus Tsc2 in Hexaploid Wheat. The Plant Genome. 3:179-189.
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 |
Two Putatively Homoeologous Wheat Genes Mediate Recognition of SnTox3 to Confer Effector-triggered Susceptibility to Stagonospora nodorum
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(Peer Reviewed Journal)
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Zhang, Z., Friesen, T.L., Xu, S.S., Shi, G., Liu, Z., Rasmussen, J., Faris, J.D. 2011. Two Putatively Homoeologous Wheat Genes Mediate Recognition of SnTox3 to Confer Effector-triggered Susceptibility to Stagonospora nodorum. Plant Journal. 65:27-38.
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 |
A Unique Wheat Disease Resistance-like Gene Governs Effector-Induced Susceptibility to Necrotrophic pathogens
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(Peer Reviewed Journal)
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Faris, J.D., Zhang, Z., Lu, H., Lu, S., Cloutier, S., Fellers, J.P., Meinhardt, S.W., Rasmussen, J.B., Xu, S.S., Oliver, R.P., Simons, K.J., Friesen, T.L. 2010. A Unique Wheat Disease Resistance-like Gene Governs Effector-Induced Susceptibility to Necrotrophic pathogens. Proceedings of the National Academy of Sciences. 107:13544-13549.
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 |
Targeted mapping of Cdu1, a major locus regulating grain cadmium concentration in durum wheat (Triticum turgidum L. var durum)
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(Peer Reviewed Journal)
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Wiebe, K., Pozniak, C.J., Harris, N., Faris, J.D., Clarke, J.M., Knox, R.E., Taylor, G. 2010. Targeted mapping of Cdu1, a major locus regulating grain cadmium concentration in durum wheat (Triticum turgidum L. var durum). Theoretical and Applied Genetics. 121:1047-1058.
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 |
Variation in Kernel Characteristics and Protein Molecular Weight Distribution of Langdon Durum–Wild Emmer Wheat Chromosome Substitution Lines
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(Peer Reviewed Journal)
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Ohm, J., Klindworth, D.L., Hareland, G.A., Faris, J.D., Elias, M., Xu, S.S. 2010. Variation in Kernel Characteristics and Protein Molecular Weight Distribution of Langdon Durum–Wild Emmer Wheat Chromosome Substitution Lines. Journal of Cereal Science. 52:207-214.
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 |
Development of Expressed Sequence Tag (EST)–based Markers for Genomic Analysis of a Barley 6H Region Harboring Multiple Net Form Net Blotch Resistance Genes
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(Peer Reviewed Journal)
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Liu, Z., Faris, J.D., Edwards, M.C., Friesen, T.L. 2010. Development of Expressed Sequence Tag (EST)–based Markers for Genomic Analysis of a Barley 6H Region Harboring Multiple Net Form Net Blotch Resistance Genes. The Plant Genome. 3:41-52
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Dissection of effector-induced host susceptibility pathways in Stagonospora nodorum blotch of wheat
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(Abstract Only)
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Lu, S., Friesen, T.L., Faris, J.D. 2010. Dissection of effector-induced host susceptibility pathways in Stagonospora nodorum blotch of wheat.Phytopathology 100:S151
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 |
Genetic Variation of Seed Dormancy in Synthetic Hexaploid Wheat-Derived Populations
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(Peer Reviewed Journal)
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Gu, X., Zhang, L., Glover, K., Chu, C., Xu, S.S., Faris, J.D., Friesen, T.L., Ibrahim, A. 2010. Genetic Variation of Seed Dormancy in Synthetic Hexaploid Wheat-Derived Populations. Crop Science. 50:1318-1324.
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 |
Marker-assisted Characterization of Durum Wheat Langdon-Golden Ball Disomic Substitution Lines
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(Peer Reviewed Journal)
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Xu, S.S., Chu, C.G., Chao, S., Klindworth, D.L., Faris, J.D., Elias, E.M. 2010. Marker-assisted Characterization of Durum Wheat Langdon-Golden Ball Disomic Substitution Lines. Theoretical and Applied Genetics.120:1575-1585
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Genetic Analysis of Disease Susceptibility Caused by Compatible Tsn1-SnToxA and Snn1-SnTox1 Interactions in the Wheat-Stagonospora Nodorum Pathosystem
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(Peer Reviewed Journal)
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Chu, C.G., Faris, J.D., Xu, S.S., Friesen, T.L. 2010. Genetic Analysis of Disease Susceptibility Caused by Compatible Tsn1-SnToxA and Snn1-SnTox1 Interactions in the Wheat-Stagonospora Nodorum Pathosystem. Theoretical and Applied Genetics. 120:1451-1459
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Characterization Of The Wheat-Stagonospora nodorum Disease System - What Is The Molecular Basis of This Quantitative Necrotrophic Disease Interaction
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(Proceedings)
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Friesen, T.L., Faris, J.D. 2010. Characterization Of The Wheat-Stagonospora nodorum Disease System - What Is The Molecular Basis of This Quantitative Necrotrophic Disease Interaction. Canadian Journal of Plant Pathology 32:20-28
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Identification of Chromosome Locations of Genes Affecting pre-Harvest Sprouting and Seed Dormancy using Chromosome Substitution Lines in Tetraploid Wheat (Triticum turgidum L.)
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(Peer Reviewed Journal)
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Chao, S., Xu, S.S., Elias, E., Faris, J.D., Sorrells, M. 2010. Identification of Chromosome Locations of Genes Affecting pre-Harvest Sprouting and Seed Dormancy using Chromosome Substitution Lines in Tetraploid Wheat (Triticum turgidum L.). Crop Science. 50:1180-1187
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Pathogen Exploitation of Gene-for-Gene Resistance Mechanisms in the Wheat-Stagonospora nodorum Pathosystem
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(Abstract Only)
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Faris, J.D., Zhang, Z., Lu, S., Lu, H., Reddy, L., Cloutier, S., Fellers, J.P., Meinhardt, S.W., Rasmussen, J.B., Xu, S.S., Simons, K.J., Friesen, T.L. 2010. Pathogen Exploitation of Gene-for-Gene Resistance Mechanisms in the Wheat-Stagonospora nodorum Pathosystem. Meeting Abstract. pg.136
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Two Homoeologous Wheat Genes Confer Sensitivity to a Single Host-Selective Toxin and Susceptibility to Stagonospora nodorum blotch (SNB)
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(Abstract Only)
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Zhang, Z., Friesen, T.L., Shi, G., Rasmussen, J.B., Faris, J.D. 2010. Two Homoeologous Wheat Genes Confer Sensitivity to a Single Host-Selective Toxin and Susceptibility to Stagonospora nodorum blotch (SNB). Meeting Abstract. pg 188
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Identification and Characterization of a Novel Host-Toxin Interaction in the Wheat - Stagonospora Nodorum Pathosystem
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(Peer Reviewed Journal)
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Abeysekara, N., Friesen, T.L., Keller, B., Faris, J.D. 2009. Identification and Characterization of a Novel Host-Toxin Interaction in the Wheat - Stagonospora Nodorum Pathosystem. Theoretical and Applied Genetics. 120:117-126
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Identification of Novel Tan Spot Resistance QTLs Using an SSR-Based Linkage Map of Tetraploid Wheat
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(Peer Reviewed Journal)
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Chu, C., Chao, S., Friesen, T.L., Faris, J.D., Zhong, S., Xu, S.S. 2009.Novel Tan Spot Resistance QTLs Detected Using an SSR-Based Linkage Map of Tetraploid Wheat. Molecular Breeding. 25:327-338.
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SnTox3 Acts in Effector Triggered Susceptibility to Induce Disease on Wheat Carrying the Snn3 Gene
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(Peer Reviewed Journal)
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Liu, Z., Faris, J.D., Oliver, R.P., Tan, K., Solomon, P.S., Mcdonald, M.C., Mcdonald, B.A., Nunez, A., Lu, S., Rasmussen, J.B., Friesen, T.L. 2009. SnTox3 Acts in Effector Triggered Susceptibility to Induce Disease on Wheat Carrying the Snn3 Gene. PLoS Pathogens. 5:(9) 1-15
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Re-Evaluation of a Tetraploid Wheat Population Indicates That the Tsn1-ToxA Interaction is the Only Factor Governing Stagonospora Nodorum Blotch Susceptibility
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(Peer Reviewed Journal)
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Faris, J.D., Friesen, T.L. 2009. Re-Evaluation of a Tetraploid Wheat Population Indicates That the Tsn1-ToxA Interaction is the Only Factor Governing Stagonospora Nodorum Blotch Susceptibility. Phytopathology. 99:(8) 906-912
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Identification of ToxA-Interacting Proteins Suggests a Possible Role for Pathogenesis-Related Protein 1(PR-1) in Mediating Stagonospora Nodorum-wheat Interactions
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(Abstract Only)
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Lu, S., Friesen, T.L., Faris, J.D. 2009. Identification of ToxA-Interacting Proteins Suggests a Possible Role for Pathogenesis-Related Protein 1(PR-1) in Mediating Stagonospora Nodorum-wheat Interactions. Meeting Abstract. p. 97.
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Identification of Novel QTL for Seeding and Adult Plant Leaf Rust Resistance in a Wheat Doubled Haploid Population
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(Peer Reviewed Journal)
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Chu, C.G., Friesen, T.L., Xu, S.S., Faris, J.D., Kolmer, J.A. 2009. Identification of Novel QTL for Seeding and Adult Plant Leaf Rust Resistance in a Wheat Doubled Haploid Population. Theoretical and Applied Genetics. 119:263-269
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Agronomic and Quality Characteristics of Two New Sets of Langdon Durum – wWld Emmer Wheat Chromosome Substitution Lines
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(Peer Reviewed Journal)
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Klindworth, D.L., Hareland, G.A., Elias, E.M., Faris, J.D., Chao, S., Xu, S.S. 2009. Agronomic and Quality Characteristics of Two New Sets of Langdon Durum – wWld Emmer Wheat Chromosome Substitution Lines. Journal of Cereal Science 50: 29-35
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Host-selective toxins produced by Stagonospora nodorum confer disease susceptibility in adult wheat plants under field conditions
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(Peer Reviewed Journal)
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Friesen, T.L., Chu, C.G., Liu, Z.H., Xu, S.S., Halley, S., Faris, J.D. 2009. Host-selective toxins produced by Stagonospora nodorum confer disease susceptibility in adult wheat plants under field conditions. Theoretical and Applied Genetics. 118:1489-1497
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Development and characterization of expressed sequence tag (EST)-derived microsatellite markers for the wheat stem rust fungus, Puccinia graminis f.sp. tritici
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(Peer Reviewed Journal)
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Zhong, S., Leng, Y., Friesen, T.L., Faris, J.D., Szabo, L.J. 2009. Development and characterization of expressed sequence tag (EST)-derived microsatellite markers for the wheat stem rust fungus, Puccinia graminis f.sp. tritici. Phytopathology 99:282-289.
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The concurrence of Stagonospora nodorum blotch resistance with host-selective toxin insensitivity in tetraploid wheat
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(Abstract Only)
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Chu, C., Friesen, T.L., Chao, S., Faris, J.D., Xu, S.S. 2008. The concurrence of Stagonospora nodorum blotch resistance with host-selective toxin insensitivity in tetraploid wheat. National Wheat Genomics Conference. p. 9 (NWGC), December 4-6, 2008, Indianapolis, IN
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 |
A Point Mutation Demonstrating the Pleiotropic Effects of the Domestication Gene Q in Hexaploid Wheat
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(Abstract Only)
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Zhang, Z., Gill, B.S., Faris, J.D. 2008. A Point Mutation Demonstrating the Pleiotropic Effects of the Domestication Gene Q in Hexaploid Wheat. Plant and Animal Genome Conference XVII, p. 686
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Map-Based Cloning of the Fungal Toxin Sensitivity Gene Tsn1 in Wheat
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(Abstract Only)
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Faris, J.D., Zhang, Z., Lu, H., Reddy, L., Lu, S., Simons, K.J., Fellers, J.P., Friesen, T.L. 2009. Map-Based Cloning of the Fungal Toxin Sensitivity Gene Tsn1 in Wheat. Plant and Animal Genome Conference XVII abstracts p. 305
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Development and characterization of expressed sequence tag (EST)-derived microsatellite markers for the wheat stem rust fungus, Puccinia graminis f. sp. tritici
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(Abstract Only)
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Zhong, S., Leng, Y., Friesen, T.L., Faris, J.D., Szabo, L.J. 2008. Development and characterization of expressed sequence tag (EST)-derived microsatellite markers for the wheat stem rust fungus, Puccinia graminis f. sp. tritici. APS Annual Meeting. 98(6):S180
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Molecular and cytogenetic characterization of a durum wheat Aegilops speltoides chromosome translocation conferring resistance to stem rust
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(Peer Reviewed Journal)
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Faris, J.D., Xu, S.S., Xiwen, C., Friesen, T.L., Jin, Y. 2008. Molecular and cytogenetic characterization of a durum wheat Aegilops speltoides chromosome translocation conferring resistance to stem rust. Chromosome Research. 16(8): 1097-1105.
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A region of barley chromosome 6H harbors multiple major genes associated with net type blotch resistance.
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(Peer Reviewed Journal)
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Abu, Q.M., Liu, Z., Faris, J.D., Chao, S., Edwards, M.C., Lai, Z., Franckowiak, J.D., Friesen, T.L. 2008. A region of barley chromosome 6H harbors multiple major genes associated with net type blotch resistance. Theoretical and Applied Genetics. 117:1261-1270
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Identification of chromosomes responsible for crown rot resistance in durum wheat
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(Proceedings)
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Zheng, Z., H.B. Li, J. Ma, S. Chakraborty, J.D. Faris, S.S. Xu, and C.J. Liu. 2008. Identification of chromosomes responsible for crown rot resistance in durum wheat. In: R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp (Eds.) Proc. 11th Wheat Genet. Symp., vol. 3. Sydney University Press, Sydney, Australia. Pp 770-772.
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Chromosome Location and Characterization of Genes for Grain Protein Content in Triticum dicoccoides
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(Proceedings)
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Xu, S.S., D.L. Klindworth, G.A. Hareland, E.M. Elias, J.D. Faris, and S. Chao. 2008. Chromosome location and characterization of genes for grain protein content in Triticum dicoccoides. In: R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp (Eds.) Proc. 11th Int. Wheat Genet. Symp., vol. 2. Sydney University Press, Sydney, Australia. Pp 572-574.
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Development,Identification and Validation of Markers for Mmarker-Assisted Selection Against the Stagonospora nodorum Toxin Ssensitivity Genes Tsn1 and Snn2 in Wheat
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(Peer Reviewed Journal)
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Zhang, Z., Friesen, T.L., Simons, K.J., Xu, S.S., Faris, J.D. 2009. Development,Identification and Validation of Markers for Mmarker-Assisted Selection Against the Stagonospora nodorum Toxin Ssensitivity Genes Tsn1 and Snn2 in Wheat. Molecular Breeding,23:35-49.
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IDENTIFICATION, CLONING, AND CHARACTERIZATION OF SNTOX3 USING HETEROLOGOUS EXPRESSION TRANSFORMATION, AND SITE DIRECTED GENE DISRUPTION
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(Abstract Only)
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Friesen, T.L., Liu, Z.H., Zhang, Z., Faris, J.D., Solomon, P.S., Tan, K.C., Ferguson, H.M., Oliver, R.P. 2008. Identification, cloning, and characterization of sntox3 using heterologous expression transformation, and site directed gene disruption. Meeting Abstract. 7th Mycosphaerella Stagonospora Symposium, Ascona, Switzerland, August 18-22, 2008
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CHARACTERIZATION OF THE ROLE OF HOST-SELECTIVE TOXINS IN THE STAGONOSPORA NODORUM - WHEAT PATHOSYSTEM SHOWS AN INVERSE GENE-FOR-GENE STRUCTURE
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(Abstract Only)
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Friesen, T.L., Liu, Z., Zhang, Z., Solomon, P.S., Oliver, R.P., Faris, J.D. 2008. Characterization of the role of host-selective toxins in the stagonospora nodorum - wheat pathosystem shows an inverse gene-for-gene structure. 7th Mycosphaerella Stagonospora Symposium in Ascona, Switzerland, August 18-22, 2008.
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Chromosome engineering to enhance utility of alien-derived stem rust resistance
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(Proceedings)
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Xu, S.S., I.S. Dundas, M.O. Pumphrey, Y. Jin, J.D. Faris, X. Cai, L.L. Qi, B.R. Friebe, and B.S. Gill. 2008. Chromosome engineering to enhance utility of alien-derived stem rust resistance. In: R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp (Eds.) Proc. 11th Int. Wheat Genet. Symp., vol. 1. Sydney University Press, Sydney, Australia. Pp 12-14.
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Identification of novel tan spot resistance loci beyond the known host-selective toxin insensitivity genes in wheat
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(Peer Reviewed Journal)
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Chu, C., Friesen, T.L., Xu, S.S., Faris, J.D. 2008. Identification of novel tan spot resistance loci beyond the known host-selective toxin insensitivity genes in wheat. Theoretical and Applied Genetics 117:873-881
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 |
Acc homoeoloci and the evolution of wheat genomes
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(Peer Reviewed Journal)
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Chalupska, D., Lee, H.Y., Faris, J.D., Evrard, A., Chalhoub, B., Haselkorn, R., Gornicki, P. 2008. Acc homoeoloci and the evolution of wheat genomes. Proceedings of the National Academy of Sciences. 105:9691-9696
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 |
Genetics of host-pathogen interactions in the wheat-Stagonospora nodorum pathosystem
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(Proceedings)
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Faris, J.D., Lu, H.J., Zhang, Z., Liu, Z.H., Xu, S.S., Chu, C.G., Abeysekara, N., Fellers, J.P., Cloutier, S., Keller, B., Scofield, S.R., Friesen, T.L. 2008. Genetics of host-pathogen interactions in the wheat-Stagonospora nodorum pathosystem. International Wheat Conference Proceedings. Australia Aug 24-29
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Genomic analysis of the Snn1 locus on wheat chromosome arm 1BS and the identification of candidate genes
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(Peer Reviewed Journal)
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Reedy, L., Friesen, T.L., Meinhardt, S.W., Chao, S., Faris, J.D. 2008. Genomic analysis of the Snn1 locus on wheat chromosome arm 1BS and the identification of candidate genes. The Plant Genome. 1:55-66
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 |
Host specific toxins; effectors of necrotrophic pathogenicity
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(Peer Reviewed Journal)
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Friesen, T.L., Faris, J.D., Solomon, P.S., Oliver, R.P. 2008. Host specific toxins; effectors of necrotrophic pathogenicity. Cellular Microbiology. 10(7) 1421-1428
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 |
Whole Genome Mapping in a Wheat Doubled Haploid Population Using SSRs and TRAPS and the Identification of QTL for Agronomic Traits
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(Peer Reviewed Journal)
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Chu, C., Xu, S.S., Friesen, T.L., Faris, J.D. 2008. Whole Genome Mapping in a Wheat Doubled Haploid Population Using SSRs and TRAPS and the Identification of QTL for Agronomic Traits. Molecular Breeding. 22:251-266
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 |
Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q
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(Peer Reviewed Journal)
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Faris, J.D., Zhang, Z., Fellers, J.P., Gill, B.S. 2008. Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q. Functional and Integrative Genomics. 8:149-164
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Evaluation of seedling resistance to tan spot and Stagonospora nodorum blotch in tetraploid wheat
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(Peer Reviewed Journal)
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Chu, C.G., Friesen, T.L., Faris, J.D., Xu, S.S. 2008. Evaluation of seedling resistance to tan spot and Stagonospora nodorum blotch in tetraploid wheat. Crop Science. 48:1107-1116
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 |
Seedling resistance to tan spot and Stagonospora nodorum leaf blotch in wild emmer wheat (Triticum dicoccoides)
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(Peer Reviewed Journal)
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Chu, C.G., Xu, S.S., Faris, J.D., Nevo, E., Friesen, T.L. 2007. Seedling resistance to tan spot and Stagonospora nodorum leaf blotch in wild emmer wheat (Triticum dicoccoides). Plant Disease. 92:1239-1236
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 |
The emergence of tan spot disease caused by toxigenic Pyrenophora tritici-repentis in Australia is not associated with increased deployment of toxin-sensitive cultivors.
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(Peer Reviewed Journal)
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Oliver, R.P., Lord, M., Rybak, K., Faris, J.D., Solomon, P.S. 2008. The emergence of tan spot disease caused by toxigenic Pyrenophora tritici-repentis in Australia is not associated with increased deployment of toxin-sensitive cultivors.. Phytopathology. 98:488-191
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Genetic characterization of a novel wheat-Stagonospora nodorum host-selective toxin interaction and it role in disease susceptibility
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(Peer Reviewed Journal)
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Friesen, T.L., Zhang, Z., Solomon, P.S., Oliver, R.P., Faris, J.D. 2008. Genetic characterization of a novel wheat-Stagonospora nodorum host-selective toxin interaction and it role in disease susceptibility. Plant Physiology. 146:682-693
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 |
Identification of seed dormancy for four populations derived from synthetic hexaploid wheat
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(Abstract Only)
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Gu, X., Ren, S., Chu, C., Glover, K., Xu, S.S., Faris, J.D., Friesen, T.L., Ibrahim, A. 2007. Identification of seed dormancy for four populations derived from synthetic hexaploid wheat. Plant and Animal Genome Conference. December 1-2, 2007 Kansas City MO.
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Progress Toward Map-Based Cloning of an Avirulence Gene from Pyrenophora teres f. teres
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(Abstract Only)
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Liu, Z., Faris, J.D., Edwards, M.C., Friesen, T.L. 2008. Progress Toward Map-Based Cloning of an Avirulence Gene from Pyrenophora teres f. teres. International Congress of Plant Pathology Abstracts and Proceedings. 90(S2):229
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Stagonospora nodorum utilizes a sophisticated inverse gene-for-gene system involving proteinaceous host-selective toxins interacting with dominant wheat sensitivity genes
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(Abstract Only)
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Friesen, T.L., Faris, J.D., Liu, Z., Solomon, P.S., Oliver, R.P. 2008. Stagonospora nodorum utilizes a sophisticated inverse gene-for-gene system involving proteinaceous host-selective toxins interacting with dominant wheat sensitivity genes. 9th International Congress of Plant Pathology Abstracts and Proceedings, Torino, Italy, AUg 24-29, 2008.
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Multiple host-specific toxins, lateral gene transfer and gene loss in the evolution of cereal Pleosporalean pathogens
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(Abstract Only)
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Oliver, R.P., Solomon, P.S., Hane, J., Ferguson-Hunt, M., Mcdonald, B.A., Faris, J.D., Friesen, T.L. 2008. Multiple host-specific toxins, lateral gene transfer and gene loss in the evolution of cereal Pleosporalean pathogens. International Congress of Plant Pathology Abstracts and Proceedings. Torino, Italy, August 24-29, 2008.
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Progress towards the construction of a sequence-ready physical map of the 3AS chromosome arm of hexaploid wheat
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(Abstract Only)
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Gill, B., Li, W., Sehgal, S.K., Faris, J.D., Reddy, L., Devos, K.M., Buell, R., Gornicki, P., Rabinowicz, P.D., Dolezel, J., Simkova, H., Safar, J., Ma, Y., Chen, F., Lucretti, S., You, F.M., Luo, M. 2008. Progress towards the construction of a sequence-ready physical map of the 3AS chromosome arm of hexaploid wheat. Plant and Animal Genome Conference XVI abstracts pg. 9
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 |
Molecular Mapping of the leaf rust resistance gene Lr17a in Wheat
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(Peer Reviewed Journal)
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Barrett, B., Faris, J.D., Fellers, J.P. 2008. Molecular Mapping of the leaf rust resistance gene Lr17a in Wheat. Crop Science.48:1124-1128.
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Genetics and Genomics of Wheat Domestication-Driven Evolution
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(Proceedings)
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Gill, B., Li, W., Sood, S., Kuraparthy, V., Friebe, B., Simons, K.J., Zhang, Z., Faris, J.D. 2008. Genetics and Genomics of Wheat Domestication-Driven Evolution Israel Journal of Plant Science. 55:223-229
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Wheat-rice colinearity and chromosome walking at the Snn1 locus in wheat
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(Abstract Only)
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Reddy, L., Friesen, T.L., Meinhardt, S.W., Chao, S., Scofield, S.R., Faris, J.D. 2007. Wheat-rice colinearity and chromosome walking at the Snn1 locus in wheat. Meeting Abstract. National Wheat Genomics Conference Abstracts. pg 28
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Exploring the functional roles of the Q gene homoeoalleles in wheat
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(Abstract Only)
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Zhang, Z., Simons, K.J., Gill, B.S., Faris, J.D. 2007. Exploring the functional roles of the Q gene homoeoalleles in wheat. Meeting Abstract. National Wheat Genomics Abstracts pg. 6
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Toward a better understanding of a major FHB resistance QTL in tetraploid wheat
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(Abstract Only)
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Zhu, X., Chen, X., Faris, J.D., Hu, J., Stack, R.S., Adhikari, T., Elias, E.M., Kianian, S.F., Cai, X. 2007. Toward a better understanding of a major FHB resistance QTL in tetraploid wheat. Meeting Abstract. National Wheat Genomics Conference abstracts p. 12
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Whole genome mapping and QTL analysis in a doubled haploid population derived from the cross between a synthetic hexaploid wheat and hard red spring wheat
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(Abstract Only)
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Chu, C., Xu, S.S., Friesen, T.L., Faris, J.D. 2007. Whole genome mapping and QTL analysis in a doubled haploid population derived from the cross between a synthetic hexaploid wheat and hard red spring wheat. Meeting Abstract. National Wheat Conference Abstract pg 20.
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 |
Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q
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(Abstract Only)
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Faris, J.D., Zhang, Z., Fellers, J.P., Gill, B.S. 2008. Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q. Plant and Animal Genome Conference XVI abstract pg. 262.
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Genomic analysis of the Tsn1 locus and the identification of candidate genes
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(Abstract Only)
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Faris, J.D., Lu, H., Zhang, Z., Reddy, L., Fellers, J.P., Friesen, T.L. 2008. Genomic analysis of the Tsn1 locus and the identification of candidate genes. Plant and Animal Genome ConferenceXVI abstracts pg. 305
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Genetic analysis of host-toxin interactions in the wheat-Stagonospora nodorum pathosystem
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(Abstract Only)
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Faris, J.D., Friesen, T.L., Lu, H., Reddy, L., Zhang, Z., Liu, Z., Xu, S.S., Meinhardt, S.W., Fellers, J.P., Oliver, R.P., Solomon, P.S., Chao, S., Chu, C., Abeysekara, N., Scofield, S.R. 2007. Genetic analysis of host-toxin interactions in the wheat-Stagonospora nodorum pathosystem. Meeting Abstract. National Wheat Genomics Conference abstracts pg. 11
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ITEMS FROM NORTH DAKOTA: USDA-ARS CEREAL CROPS RESEARCH UNIT
()
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Faris, J.D., Xu, S.S., Friesen, T.L., Klindworth, D.L., Simons, K.J., Chao, S. 2007. Items from north dakota: usda-ars cereal crops research unit. 2007 Annual Wheat Newsletter. pg. 141-148
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Identification and Characterization of Segregation Distortion Loci Along Chromosome 5B in Tetraploid Wheat
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(Peer Reviewed Journal)
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Kumar, S., Gill, B.S., Faris, J.D. 2007. Identification and Characterization of Segregation Distortion Loci Along Chromosome 5B in Tetraploid Wheat. Molecular Genetics and Genomics. 278:187-196.
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 |
The Stagonospora nodorum-wheat pathosystem is an inverse gene-for-gene system involving multiple proteinaceous host-selective toxins
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(Peer Reviewed Journal)
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Friesen, T.L., Meinhardt, S.W., Faris, J.D. 2007. The Stagonospora nodorum-wheat pathosystem involves multiple proteinaceous host-selective toxins and corresponding host sensitivity genes that interact in an inverse gene-for gene manner. Plant Journal. 51:681-692.
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GENETIC MAPPING AND QTL ANALYSIS OF PYREONPHORA TERES F. TERES GENES CONFERRING AVIRULENCE ON BARLEY.
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(Peer Reviewed Journal)
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Lai, Z., Faris, J.D., Weiland, J.J., Steffenson, B.J., Friesen, T.L. 2007. Genetic mapping of Pyreonphora teres f. teres genes conferring avirulence on barley. Fungal Genetics and Biology. 44:323-329.
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 |
Stagonospora nodorum utilizes multiple proteinaceous host selective toxins which interact with dominant host sensitivity genes in wheat
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(Abstract Only)
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Friesen, T.L., Faris, J.D., Oliver, R.P. 2007. Stagonospora nodorum utilizes multiple proteinaceous host selective toxins which interact with dominant host sensitivity genes in wheat. Meeting Abstract. 24th Fungal Genetics Conference. p. 168.
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The initiation of map-based cloning of an avirulence gene from Pyrenophora teres
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(Abstract Only)
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Liu, Z., Faris, J.D., Edwards, M.C., Friesen, T.L. 2006. The initiation of map-based cloning of an avirulence gene from Pyrenophora teres. Meeting Abstract. 24th Fungal Genetics Conference. p. 159.
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Interspecific transfer of host-specific toxin genes in Stagonospora nodorum
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(Abstract Only)
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Oliver, R.P., Solomon, P.S., Hane, J., Stukenbrock, E.H., Mcdonald, B.A., Liu, Z., Faris, J.D., Friesen, T.L. 2007. Interspecific transfer of host-specific toxin genes in Stagonospora nodorum. Meeting Abstract. 24th Fungal Genetics Conference. p. 61.
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 |
Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat
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(Peer Reviewed Journal)
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Kumar, S., Stack, R.W., Friesen, T.L., Faris, J.D. 2007. Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat. Phytopathology. 97:592-597.
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Functional Characterization of Ptr ToxA and Molecular Identification of its Intracellular Targeting Protein in Wheat
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(Abstract Only)
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Tai, Y., Bragg, J., Lu, H., Edwards, M.C., Faris, J.D., Friesen, T.L., Meinhardt, S.W. 2007. Functional Characterization of Ptr ToxA and Molecular Identification of its Intracellular Targeting Protein in Wheat. Plant and Animal Genome VX Conference Abstracts. p.
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Identification of candidate genes associated with signaling networks regulated by the Q gene in wheat
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(Abstract Only)
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Tai, Y., Simons, K.J., Xu, S.S., Faris, J.D. 2007. Identification of candidate genes associated with signaling networks regulated by the Q gene in wheat. Plant and Animal Genome VX Conference Abstracts. p. 300.
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 |
Delineation of the wheat Tsn1 candidate gene region
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(Abstract Only)
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Lu, H., Fellers, J.P., Tai, Y., Meinhardt, S.W., Friesen, T.L., Faris, J.D. 2007. Delineation of the wheat Tsn1 candidate gene region. Plant and Animal Genome VX Conference Abstracts. p. 174.
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 |
Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat
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(Abstract Only)
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Faris, J.D., Kumar, S., Friesen, T.L. 2007. Identification of a novel Fusarium head blight resistance QTL on chromosome 7A in tetraploid wheat. Plant and Animal Genome VX Conference Abstracts. p. 179.
|
 |
Genomic analysis of the Snn1 locus on the short arm of chromosome 1B in wheat
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(Abstract Only)
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Reddy, L., Friesen, T.L., Meinhardt, S.W., Chao, S., Faris, J.D. 2007. Genomic analysis of the Snn1 locus on the short arm of chromosome 1B in wheat. Plant and Animal Genome VX Conference Abstracts. p. 176.
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Molecular characterization of the AP2-like Q gene homoeoallele on chromosome 5D in hexaploid wheat
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(Abstract Only)
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Zhang, Z., Simons, K.J., Faris, J.D. 2007. Molecular characterization of the AP2-like Q gene homoeoallele on chromosome 5D in hexaploid wheat. Plant and Animal Genome VX Conference Abstracts. p. 300.
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 |
The Stagonospora nodorum-wheat pathosystem is an inverse gene for gene system involving multiple proteinaceous host selective toxins
-
(Abstract Only)
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Friesen, T.L., Faris, J.D., Oliver, R. 2007. The Stagonospora nodorum-wheat pathosystem is an inverse gene for gene system involving multiple proteinaceous host selective toxins. Plant and Animal Genome VX Conference Abstracts. p. 179.
|
 |
Saturation and comparative mapping of a major Fusarium head blight resistance QTL in tetraploid wheat
-
(Peer Reviewed Journal)
|
Chen, X., Faris, J.D., Hu, J., Stack, R.W., Adhikari, T., Elias, E.M., Kianian, S.F., Cai, X. 2006. Saturation and comparative mapping of a major Fusarium head blight resistance QTL in tetraploid wheat. Molecular Breeding. 19:113-124.
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 |
GENETIC MAPPING OF PYRENOPHORA TERES AVIRULENCE GENES
-
(Proceedings)
|
Friesen, T.L., Lai, Z., Liu, Z., Faris, J.D., Steffenson, B.J. 2006. Genetic mapping of pyrenophora teres avirulence genes. In: Proceedings of the 3rd International Workshop on Barley Leaf Blight. July 23-27, 2005, Edmonton, Canada. p.
|
 |
THE TSN1-TOXA INTERACTION IN THE WHEAT-STAGONOSPORA NODORUM PATHOSYSTEM PARALLELS THAT OF THE WHEAT-TAN SPOT SYSTEM
-
(Peer Reviewed Journal)
|
Liu, Z., Friesen, T.L., Hua, L., Meinhardt, S.W., Oliver, R., Rassmussen, J.B., Faris, J.D. 2007. The tsn1-toxa interaction in the wheat-stagonospora nodorum pathosystem parallels that of the wheat-tan spot system. Genome. 49:1265-1273.
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 |
Emergence of a new disease as a result of interspecific virulence gene transfer
-
(Peer Reviewed Journal)
|
Friesen, T.L., Stukenbrock, E.H., Liu, Z., Meinhardt, S., Ling, H., Faris, J.D., Rasmussen, J.B., Solomon, P.S., McDonald, B.A., Oliver, R.P. 2006. Emergence of a new disease as a result of interspecific virulence gene transfer. Nature Genetics. 38(8):953-956.
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 |
IDENTIFICATION AND CHROMOSOMAL LOCATION OF MAJOR GENES FOR RESISTANCE TO PYRENOPHORA TERES F. TERES AND P. TERES F. MACULATA IN BARLEY DOUBLED HAPLOID POPULATION.
-
(Peer Reviewed Journal)
|
Friesen, T.L., Faris, J.D., Lai, Z., Steffenson, B.J. 2006. Identification and chromosomal location of major genes for resistance to Pyrenophora teres in a doubled-haploid barley population. Genome. 49:855-859
|
 |
MOLECULAR MAPPING OF HYBRID NECROSIS GENES NE1 AND NE2 IN HEXAPLOID WHEAT USING MICROSATELLITE MARKERS.
-
(Peer Reviewed Journal)
|
Chu, C.-G, Faris, J.D., Friesen, T.L., Xu, S.S. 2006. Molecular mapping of hybrid necrosis genes Ne1 and Ne2 in hexaploid wheat using microsatellite markers. Theoretical and Applied Genetics. 112:1374-1381.
|
 |
GENOMIC ANALYSIS AND MARKER DEVLOPMENT FOR THE TSN1 LOCUS IN WHEAT USING BIN-MAPPED ESTS AND FLANKING BAC CONTIGS.
-
(Peer Reviewed Journal)
|
Lu, H., Fellers, J.P., Friesen, T.L., Faris, J.D. 2006. Genomic analysis and marker devlopment for the TSN1 locus in wheat using bin-mapped ests and flanking bac contigs. Theoretical and Applied Genetics. 112:1132-142.
|
 |
EVALUATION OF MACRO AND MICROCOLINEARITY BETWEEN THE GENOMIC REGION OF WHEAT CHROMOSOME 5B CONTAINING THE TSN1 GENE AND THE RICE GENOME.
-
(Peer Reviewed Journal)
|
Lu, H., Faris, J.D. 2006. Macro- and microcolinearity between the genomic region of wheat chromosome 5B containing the Tsn1 gene and the rice genome. Functional and Integrative Genomics. 6:90-103.
|
 |
MOLECULAR TAGGING OF TSN1 IN WHEAT: COMPARING FEASIBILITY OF BIN-MAPPED EST MARKERS WITH AFLP-BSA AND PREVIOUSLY MAPPED RFLPS AND SSRS
-
(Abstract Only)
|
Lu, H., Faris, J.D. Molecular tagging of tsn1 in wheat: comparing feasibility of bin-mapped est markers with aflp-bsa and previously mapped rflps and ssrs. 2005 American Society of Agronomy Abstracts, p. 310.
|
 |
IDENTIFICATION OF A FUSARIUM HEAD BLIGHT RESISTANCE QTL ON CHROMOSOME 6B IN TETRAPLOID WHEAT.
-
(Abstract Only)
|
Stack, R., Faris, J.D. 2006. Identification of a fusarium head blight resistance QTL on chromosome 6b in tetraploid wheat [abstract]. Plant and Animal Genome XIV Conference. Abstract No. P285:172.
|
 |
HIGH-RESOLUTION MAPPING AND CHROMOSOME WALKING AT THE SNN1 LOCUS ON CHROMOSOME 1B IN WHEAT.
-
(Abstract Only)
|
Reddy, L., Friesen, T.L., Meinhardt, S.W., Faris, J.D. 2006. High-resolution mapping and chromosome walking at the snn1 locus on chromosome 1b in wheat [abstract]. Plant and Animal Genome XIV Conference. Abstract No. P349:188.
|
 |
MOLECULAR MAPPING OF HYBRID NECROSIS GENES NE1 AND NE2 IN HEXAPLOID WHEAT USING MICROSATELLITE MARKERS
-
(Abstract Only)
|
Chu, C., Faris, J.D., Friesen, T.L., Xu, S.S. 2006. Molecular mapping of hybrid necrosis genes Ne1 and Ne2 in hexaploid wheat using microsatellite markers [abstract]. Plant and Animal Genome XIV Conference. Abstract No. P280:171.
|
 |
APPLICATIONS OF FUNCTIONAL GENOMICS IN STUDIES OF WHEAT DOMESTICATION AND DISEASE RESISTANCE
-
(Abstract Only)
|
Tai, Y., Faris, J.D., Friesen, T.L., Xu, S.S., Meinhardt, S.W., Stack, R.W., Simons, K., Bragg, J., Edwards, M.C. 2006. Applications of functional genomics in studies of wheat domestication and disease resistance [abstracts]. Plant and Animal Genome XIV Conference. Abstract No. P830:307.
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 |
FUNCTIONAL ANALYSIS OF THE DOMESTICATION GENE Q IN WHEAT.
-
(Abstract Only)
|
Zhang, Z., Tai, Y., Simons, K.J., Fellers, J.P., Gill, B.S., Faris, J.D. 2006. Functional analysis of the domestication gene q in wheat [abstract]. Plant and Animal Genome XIV Conference. Abstact No. P828:307.
|
 |
SATURATION MAPPING OF THE MAJOR FHB RESISTANCE QTL QFHS.NDSU-3AS IN TETRAPLOID WHEAT
-
(Abstract Only)
|
Chen, X., Faris, J.D., Jinguo, H., Stack, R., Adhikari, T., Kianian, S., Cai, X. 2006. Saturation mapping of the major FHB resistance QTL Qfhs.ndsu-3AS in tetraploid wheat. Plant and Animal Genome XIV Conference Abstracts, P291.
|
 |
Molecular Characterization of the Major Wheat Domestication Gene Q
-
(Peer Reviewed Journal)
|
Simons, K.J., Fellers, J.P., Trick, H.N., Zhang, Z., Tai, Y., Gill, B.S., Faris, J.D. 2006. Molecular Characterization of the Major Wheat Domestication Gene Q. Genetics. 172:547-555.
|
 |
THE WHEAT SUPER DOMESTICATION GENE Q. (WHEAT INFORMATION SERVICE, "FRONTIERS OF BIOSCIENCES")
()
|
Faris, J.D., Simons, K.J., Zhang, Z., Gill, B. 2005. The wheat super domestication gene Q. Frontiers of Wheat Bioscience. 100:129-148.
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 |
A NEW HOST SELECTIVE TOXIN PRODUCED BY STAGONOSPORA NODORUM AND ITS SIGNIFICANCE IN DISEASE USING A SEGREGATING WHEAT MAPPING POPULATION.
-
(Abstract Only)
|
Friesen, T.L., Faris, J.D., Meinhardt, S.W. 2005. A new host selective toxin produced by stagonospora nodorum and its significance in disease using a segregating wheat mapping population. American Phytopathological Society Abstracts. Vol. 95:S32.
|
 |
GENOMIC MAPPING OF TOXIN SENSITIVITY AND QUANTITATIVE TRAIT LOCI FOR SEEDLING RESISTANCE TO STAGONOSPORA NODORUM IN WHEAT.
-
(Abstract Only)
|
Liu, Z.H., Friesen, T.L., Ling, H., Meinhardt, S.W., Rasmussen, J.B., Faris, J.D. 2006. Genomic mapping of toxin sensitivity and quantitative trait loci for seedling resistance to stagonospora nodorum in wheat. Phytopathology. 95:S62
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 |
A WHEAT INTERVARIETAL GENETIC LINKAGE MAP BASED ON MICROSATELLITE AND TARGET REGION AMPLIFIED POLYMORPHISM MARKERS AND ITS UTILITY FOR DETECTING QUANTITATIVE TRAIT LOCI.
-
(Peer Reviewed Journal)
|
Liu, Z., Anderson, J.A., Hu, J., Friesen, T.L., Rasmussen, J.B., Faris, J.D. 2005. A wheat intervarietal genetic linkage map based on microsatellite and target region amplified polymorphism markers and its utility for detecting quantitative trait loci. Theoretical and Applied Genetics. Vol. 111:792-794.
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 |
MOLECULAR CYTOGENETIC CHARACTERIZATION AND SEED STORAGE PROTEIN ANALYSIS OF 1A/1D TRANSLOCATION IN DURUM WHEAT.
-
(Peer Reviewed Journal)
|
Xu, S.S., Faris, J.D., Cai, X., Klindworth, D.L. 2005. Molecular cytogenetic characterization and seed storage protein analysis of 1a/1d translocation in durum wheat. Chromosome Research. 13:559-568.
|
 |
IDENTIFICATION OF QUANTITATIVE TRAIT LOCI FOR RACE-NONSPECIFIC RESISTANCE TO TAN SPOT IN WHEAT.
-
(Peer Reviewed Journal)
|
Faris, J.D., Friesen, T.L. 2005. Identification of quantitative trait loci for race-nonspecific resistance to tan spot in wheat. Theoretical and Applied Genetics. Vol. 111:386-392.
|
 |
MOLECULAR MAPPING OF RESISTANCE TO PYRENOPHORA TRITICI-REPENTIS RACE 5 SENSITIVITY TO PTRTOXB IN WHEAT.
-
(Abstract Only)
|
Faris, J.D., Friesen, T.L. 2004. Molecular mapping of resistance to pyrenophora tritici-repentis race 5 sensitivity to ptrtoxb in wheat.. Plant and Animal Genome Abstracts pg. 186.
|
 |
UTILIZATION OF MOLECULAR MARKERS IN THE CHARACTERIZATION AND DEVELOPMENT OF GERMPLASM OF AND GENETIC STOCKS IN WHEAT.
-
(Abstract Only)
|
Xu, S.S., Faris, J.D., Klindworth, D.L., Cai, X., Hu, J. 2004. Utilization of molecular markers in the characterization and development of germplasm of and genetic stocks in wheat.. Plant and Animal Genome Abstracts. [Online.]Available at http://www.intl-pag.org/13/abstracts/PAG13_W225.html. Plant & Animal Genomes XIII Conference, January 15-19, 2005. San Diego, CA.
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 |
MOLECULAR CYTOGENETIC CHARACTERIZATION AND SEED STORAGE PROTEIN ANALYSIS OF 1A/1D TRANSLOCATION LINES OF DURUM WHEAT CARRYING GLU-DLD.
-
(Abstract Only)
|
Xu, S.S., Faris, J.D., Cai, X., Klindworth, D.L. 2004. Molecular cytogenetic characterization and seed storage protein analysis of 1a/1d translocation lines of durum wheat carrying glu-dld.. Plant and Animal Genome Abstracts.[Online.] Available at http://www.intl-pag.org/13/abstracts/PAG13_P239.html. Plant & Animal Genomes XIII Conference, January 15-19, 2005. San Diego,CA.
|
 |
A FLORAL HOMEOTIC GENE KEY TO THE DOMESTICATION OF WHEAT.
-
(Abstract Only)
|
Faris, J.D., Simons, K.J., Fellers, J.P., Trick, H.N., Gill, B.S. 2005. A floral homeotic gene key to the domestication of wheat. Plant and Animal Genome Abstracts. p. 186.
|
 |
MAPPING OF TOXIN SENSITIVITY AND QTL ANALYSIS OF SEEDLING RESISTANCE TO STAGONOSPORA NODORUM BLOTCH IN AN INTERVARIETAL HARD RED SPRING WHEAT POPULATION.
-
(Abstract Only)
|
Liu, Z., Friesen, T.L., Meinhardt, S.W., Rasmussen, J.B., Faris, J.D. 2005. Mapping of toxin sensitivity and QTL analysis of seedling resistance to stagonospora nodorum blotch in an intervarietal hard red spring wheat population. Plant and Animal Genome Abstracts. p. 342.
|
 |
TARGETING TSN1 IN WHEAT: COLINEARITY WITYH RICE, CHROMOSOME WALKING, AND MARKER-ASSISTED SELECTION.
-
(Abstract Only)
|
Faris, J.D., Lu, H., Friesen, T.L., Haen, K.M., Fellers, J.P., Xu, S.S., Meinhardt, S.W. 2005. Targeting Tsn1 in wheat: colinearity with rice, chromosome walking, and marker-assisted selection. Plant and Animal Genome Abstracts. p. 195.
|
 |
COMPARATIVE ANALYSES OF A GENE RICH REGION OF WHEAT CHROMOSOME 5B WITH RICE USING EXPRESSED SEQUENCES.
-
(Abstract Only)
|
Lu, H., Faris, J.D. Comparative analyses of a gene rich region of wheat chromosome 5b with rice using expressed sequences.. Plant and Animal Genome XIII Abstracts p. 259.
|
 |
A HARD RED SPRING WHEAT INTERVARIETAL GENETIC LINKAGE MAP CONSTRUCTED USING MICROSATELLITE AND TARGET REGION AMPLIFICATION POLYMORPHISM (TRAP) MARKERS.
-
(Abstract Only)
|
Liu, Z., Friesen, T.L., Rasmussen, J.B., Hu, J., Faris, J.D. 2005. A hard red spring wheat intervarietal genetic linkage map constructed using microsatellite and target region amplification polymorphism (TRAP) markers.Plant and Animal Genome Abstracts. p.351.
|
 |
ISOLATION AND CHARACTERIZATION OF THE MAJOR DOMESTICATION GENE Q IN WHEAT.
-
(Abstract Only)
|
Simons, K.J., Fellers, J.P., Trick, H.N., Gill, B.S., Faris, J.D. 2005. Isolation and characterization of the major domestication gene Q in wheat.. Plant and Animal Genome Abstracts. p. 72.
|
 |
TOWARDS POSITIONAL CLONING OF THE TSN1 GENE IN WHEAT.
-
(Abstract Only)
|
Lu, H., Fellers, J.P., Friesen, T.L., Meinhardt, S.W., Haen, K.M., Faris, J.D. 2005. Towards positional cloning of the Tsn1 gene in wheat. Plant and Animal Genome Abstracts. p. 359.
|
 |
MAPPING OF A MAJOR NET BLOTCH RESISTANCE GENE IN THE Q21861 X SM89010 DOUBLED HAPLOID POPULATION.
-
(Abstract Only)
|
Friesen, T.L., Faris, J.D., Steffenson, B.J. 2004. Mapping of a major net blotch resistance gene in the Q21861 x SM89010 doubled haploid population.. American Phytopathological Society Abstracts. Vol. 91:532
|
 |
GENETIC AND PHYSICAL MAPPING OPF A GENE CONDITIONING SENSITIVITY IN WHEAT TO A PARTIALLY PURIFIED HOST-SELECTIVE TOXIN PRODUCED BY STAGONOSPORA NODORUM.
-
(Peer Reviewed Journal)
|
Liu, Z.H., Faris, J.D., Meinhardt, S.W., Ali, S., Rasmussen, J.B., Friesen, T.L. 2004. Genetic and physical mapping opf a gene conditioning sensitivity in wheat to a partially purified host-selective toxin produced by stagonospora nodorum. Phytopathology. Vol. 94:1056-1060.
|
 |
QTL ANALYSIS AND MAPPING OF RESISTANCE TO STAGONOSPORA NODORUM LEAF BLOTCH IN WHEAT.
-
(Peer Reviewed Journal)
|
Liu, Z.H., Friesen, T.L., Rasmussen, J.B., Ali, S., Meinhardt, S.W., Faris, J.D. 2004. Qtl analysis and mapping of seedling resistance to stagonospora nodorum leaf blotch in wheat.. Phytopathology. Vol.94:1061-1067.
|
 |
POSITIONAL CLONING OF THE Q GENE IN WHEAT (ABSTRACT FOR THE 2004 INTERNATIONAL TRITICEAE MAPPING INITIATIVE WORKSHOP PROCEEDINGS. MPLS MN, MAY 22-25, 2004.
-
(Abstract Only)
|
Faris, J.D., Gill, B.S., Simons, K.J., Fellers, J.P., Trick, H.N. 2004. Positional cloning of the Q gene in wheat. International Triticeae Mapping Initiative Workshop Proceedings. May 22-25, 2004, Minneapolis, MN. 2004 Program Abstracts. p. 22.
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 |
GENOME MAPPING
()
|
Faris, J.D., Friebe, B., Gill, B.S. 2004. Genome mapping. Encyclopedia of Grain Science. p. 7-16.
|
 |
ITEMS FROM NORTH DAKOTA: THE USDA-ARS CEREAL CROPS RESEARCH UNIT.
()
|
Faris, J.D., Friesen, T.L., Xu, S.S. 2004. Items from north dakota: the usda-ars cereal crops research unit.. Wheat Newsletter. vol. 50:252-257
|
 |
MOLECULAR MAPPING OF RESISTANCE TO PYRENOPHORA TRITICI-REPENTIS RACE 5 AND SENSITIVITY TO PTR TOXB IN WHEAT.
-
(Peer Reviewed Journal)
|
Friesen, T.L., Faris, J.D. 2004. Molecular mapping of resistance to pyrenophora tritici-repentis race 5 and sensitivity to ptr toxb in wheat.. Theoretical and Applied Genetics. Vol. 109:464-471.
|
 |
GENOMIC TARGETING AND HIGH-RESOLUTION MAPPING OF THE TSN1 GENE IN WHEAT.
-
(Peer Reviewed Journal)
|
Haen, K.M., Lu, H., Friesen, T.L., Faris, J.D. 2004. Genomic targeting and high-resolution mapping of the tsn1 gene in wheat. Crop Science. Vol 44:951-962.
|
 |
MAPPING OF WHEAT SENSITIVITY TO A PARTIALLY PURIFIED HOST-SELECTIVE TOXIN PRODUCED BY STAGONOSPORA NODORUM.
-
(Proceedings)
|
Liu, Z., Friesen, T.L., Faris, J.D., Meinhardt, S., Ali, S., Rasmussen, J. 2003. Mapping of wheat sensitivity to a partially purified host-selective toxin produced by Stagonospora nodorum. Proceedings of the 6th International Symposium on Septoria/Stagonospora Diseases of Cereals. Dec. 8-12, 2003, Tunis, Tunisia. p. 139-142.
|
 |
TRAP (TARGET REGION AMPLIFICATION POLYMORPHISM) TECHNIQUE AND ITS APPLICATION TO CROP GENOMICS
-
(Abstract Only)
|
Hu, J., Miller, J.F., Xu, S.S., Faris, J.D., Miklas, P.N., Ochoa, O., Truco, M., Berville, A., Vick, B.A. 2004. Trap (target region amplification polymorphism) technique and its application to crop genomics [abstract]. Plant and Animal Genome XII Abstracts, January 10-14, 2004, San Diego, CA. W169. p. 47.
|
 |
GENOMIC TARGETING AND HIGH-RESOLUTION MAPPING OF THE TSN1 GENE IN WHEAT.
-
(Abstract Only)
|
Haen, K.M., Lu, H., Friesen, T.L., Faris, J.D. 2004. Genomic targeting and high-resolution mapping of the Tsn1 gene in wheat. 12th Plant and Animal Genome Abstracts. p. 438.
|
 |
CHROMOSOMAL LOCATION OF GENES FOR NOVEL GLUTENINS AND GLIADINS IN EMMER WHEAT (TRITICUM TURGIDUM L. VAR. DICOCCOIDES).
-
(Peer Reviewed Journal)
|
Xu, S.S., Khan, K., Klindworth, D.L., Faris, J.D., Nygard, G. 2004. Chromosomal location of genes for novel glutenins and gliadins in emmer wheat (triticum turgidum l. var. dicoccoides). Theoretical and Applied Genetics. Vol. 108:1221-1228.
|
 |
QTL ANALYSIS AND MAPPING OF RESISTANCE TO STAGONOSPORA NODORUM LEAF BLOTCH IN WHEAT
-
(Abstract Only)
|
Liu, Z., Friesen, T.L., Meinhardt, S., Ali, S., Rasmussen, J.B., Faris, J.D. 2004. QTL analysis and mapping of resistance to Stagonospora nodorum leaf blotch in wheat. 12th Plant and Animal Genome Abstracts. p. 459.
|
 |
HIGH-THROUGHPUT MARKER IDENTIFICATION AND MAPPING IN WHEAT USING TRAPS (TARGET REGION AMPLIFICATION POLYMORPHISM).
-
(Abstract Only)
|
Faris, J.D., Xu, S.S., Liu, Z., Hu, J. 2004. High-throughput marker identification and mapping in wheat using traps (target region amplification polymorphism). Plant and Animal Genomes XII Conference Abstracts. January 10-14, 2004. San Diego, CA. p. 120.
|
 |
CHROMOSOMAL LOCATION OF GENES FOR NOVEL GLUTENINS AND GLIADINS IN WILD EMMER WHEAT.
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(Abstract Only)
|
Xu, S.S., Khan, K., Klindworth, D.L., Faris, J.D., Nygard, G. 2004. Chromosomal location of genes for novel glutenins and gliadins in wild emmer wheat. 12th Plant and Animal Genome Abstracts.p. 178.
|
 |
GENETIC AND PHYSICAL MAPPING OF A GENE CONDITIONING SENSITIVITY IN WHEAT TO A PARTIALLY PURIFIED HOST-SELECTIVE TOXIN BY STAGONOSPORA NODORUM.
-
(Abstract Only)
|
Liu, Z., Faris, J.D., Meinhardt, S., Ali, S., Rasmussen, J., Friesen, T.L. 2004. Genetic and physical mapping of a gene conditioning sensitivity in wheat to a partially purified host-selective toxin by stagonospora nodorum.. Plant and Animal Genome Abstracts. p.185.
|
 |
MOLECULAR CLONING OF THE Q LOCUS IN WHEAT.
-
(Abstract Only)
|
Simons, K., Fellers, J.P., Trick, H., Gill, B.S., Faris, J.D. 2004. Molecular cloning of the Q locus in wheat. Plant and Animal Genome Abstracts. p. 110.
|
 |
THE CONSTRUCTION OF A BAC CONTIG FOR CHROMOSOME WALKING AT THE TSN1 LOCUS IN WHEAT.
-
(Abstract Only)
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Lu, H., Haen, K., Fellers, J.P., Friesen, T.L., Heinhardt, S., Faris, J.D. 2004. The construction of a BAC contig for chromosome walking at the Tsn1 locus in wheat.. Plant and Animal Genome Abstracts. p. 180.
|
 |
EVALUATION OF LANGDON DURUM-AEGILOPS TAUSCHII SYNTHETIC HEXAPLOID WHEATS FOR REACTION TO TAN SPOT, STAGONOSPORA LEAF BLOTCH, LEAF RUST, STEM RUST, AND HESSIAN FLY.
-
(Proceedings)
|
FRIESEN, T.L., XU, S.S., FARIS, J.D., RASMUSSEN, J.B., MILLER, J.D., HARRIS, M. EVALUATION OF LANGDON DURUM-AEGILOPS TAUSCHII SYNTHETIC HEXAPLOID WHEATS FOR REACTION TO TAN SPOT, STAGONOSPORA LEAF BLOTCH, LEAF RUST, STEM RUST, AND HESSIAN FLY.. WHEAT GENETICS INTERNATIONAL SYMPOSIUM PROCEEDINGS. 2003. VOL. 3:1133-1135.
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 |
MOLECULAR CHARACTERIZATION OF THE LANGDON DURUM-TRITICUM DICOCCOIDES CHROMOSOME SUBSTITUTION LINES USING TRAP (TARGET REGION AMPLIFICATION POLYMORPHISM) MARKERS
-
(Abstract Only)
|
Xu, S.S., Hu, J., Faris, J.D. 2003. Molecular characterization of the Langdon durum-Triticum dicoccoides chromosome substitution lines using TRAP (target region amplification polymorphism) markers. 10th Wheat Genetics International Symposium Proceedings. September, 1-6, 2003, Paestum, Italy. Abstract not published separately - published in proceedings. Vol. 1:91-94.
|
 |
MOLECULAR CHARACTERIZATION OF THE LANGDON DURUM-TRITICUM DICOCCOIDES CHROMOSOME SUBSTITUTION LINES USING TARGET REGION AMPLIFICATION POLYMORPHISM (TRAP) MARKERS.
-
(Proceedings)
|
XU, S.S., HU, J., FARIS, J.D. MOLECULAR CHARACTERIZATION OF THE LANGDON DURUM-TRITICUM DICOCCOIDES CHROMOSOME SUBSTITUTION LINES USING TARGET REGION AMPLIFICATION POLYMORPHISM (TRAP) MARKERS.. WHEAT GENETICS INTERNATIONAL SYMPOSIUM PROCEEDINGS. 2003. VOL. 1:91-94.
|
 |
EVALUATION OF LANGDON DURUM-AEGILOPS TAUSCHII SYNTHETIC HEXAPLOID WHEATS FOR THEIR SEEDLING REACTION TO TAN SPOT, STAGONASPORA LEAF BLOTCH, LEAF RUST, STEM RUST, AND HESSIAN FLY
-
(Abstract Only)
|
|
 |
ITEMS FROM NORTH DAKOTA: THE USDA-ARS CEREAL CROPS RESEARCH UNIT
()
|
Faris, J.D., Friesen, T.L., Xu, S.S. 2003. Items from North Dakota: The USDA-ARS Cereal Crops Research Unit. Wheat Newsletter. Vol. 215-218.
|
 |
A BACTERIAL ARTIFICIAL CHROMOSOME CONTIG SPANNING THE MAJOR DOMESTICATION LOCUS Q IN WHEAT AND IDENTIFICATION OF A CANDIDATE GENE
-
(Peer Reviewed Journal)
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FARIS, J.D., FELLERS, J.P., BROOKS, S.A., GILL, B.S. A BACTERIAL ARTIFICIAL CHROMOSOME CONTIG SPANNING THE MAJOR DOMESTICATION LOCUS Q IN WHEAT AND IDENTIFICATION OF A CANDIDATE GENE. GENETICS. 2003. VOL. 164:311-321.
|
 |
WHEAT GENOMICS: EXPLORING THE POLYPLOID MODEL.
-
(Peer Reviewed Journal)
|
FARIS, J.D., FRIEBE, B., GILL, B.S. WHEAT GENOMICS: EXPLORING THE POLYPLOID MODEL.. CURRENT GENOMICS. 2002. VOL. 3:577-591.
|
 |
POLYPLOID GENOME ANALYSIS: GENOMIC TARGETING AND HIGH-RESOLUTION MAPPING OF THE DOMESTICATION GENE Q IN WHEAT.
-
(Peer Reviewed Journal)
|
Faris, J.D., Gill, B.S. 2002. Polyploid genome analysis: genomic targeting and high-resolution mapping of the domestication gene q in wheat. Genome 45:706-718.
|
 |
ITEMS FROM NORTH DAKOTA: THE USDA-ARS CEREAL CROPS RESEARCH UNIT
()
|
Faris, J.D., Miller, J.D., Klindworth, D.L. Items from north dakota: the usda-ars cereal crops research unit. Annual Wheat Newsletter 48:249-251.
|
 |
GENES ENCODING PLASTID ACETYL-COA CARBOXYLASE AND 3-PHOSPHOGLYCERATE KINASE OF THE TRITICUM/AEGILOPS COMPLEX AND THE EVOLUTIONARY HISTORY OF POLYPLOID WHEAT.
-
(Proceedings)
|
Huang, S., Sirikhachornkit, A., Su, X., Faris, J.D., Gill, B., Haselkorn, R., Gornicki, P. 2002. Genes encoding plastid acetyl-coa carboxylase and 3-phosphoglycerate kinase of the triticum/aegilops complex and the evolutionary history of polyploid wheat. Proceedings of the National Academy of Sciences WA 99:8133-8138.
|
 |
PHYSICAL AND GENETIC MAPPING OF WHEAT NBS-LRR AND KINASE CLASS RESISTANCE GENE ANALOGS
-
(Peer Reviewed Journal)
|
MALEKI,L., FELLERS,J.P., FARIS,J.D., BOWDEN,R.L., GILL,B.S., PHYSICAL AND GENETIC MAPPING OF WHEAT NBS-LRR AND KINASE CLASS RESISTANCE GENE ANALOGS, CROP SCIENCE, 2002. 43:660-670.
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PHYLOGENETIC ANALYSIS OF THE ACETYL-COA CARBOXYLASE AND 3-PHOSPHOGLYCERATE KINASE LOCI IN WHEAT AND OTHER GRASSES.
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(Peer Reviewed Journal)
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Huang, S., Sirikhachornkit, A., Faris, J.D., Su, X., Gill, B.S., Haselkorn, R., Gornicki, P. 2002. Phylogenetic analysis of the acetyl-coa carboxylase and 3-phosphoglycerate kinase loci in wheat and other grasses. Plant Molecular Biology 48:805-820.
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CHROMOSOME MAPPING AND PHYLOGENETIC ANALYSIS OF THE CYTOSOLOC ACETYL-COA CARBOXYLASE LOCI IN WHEAT.
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(Peer Reviewed Journal)
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Faris, J.D., Sirikhachornkit, A., Haselkorn, R., Gill, B., Gornicki, P. 2001. Chromosome mapping and phylogenetic analysis of the cytosoloc acetyl-coa carboxylase loci in wheat. Molecular Biology and Evolution 18:1720-1733.
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ISOLATION AND CHARACTERIZATION OF NOVEL CDNA CLONES OF ACIDIC CHITINASES AND BETA-1,3-GLUCANASES FROM WHEAT SPIKES INFECTED BY FUSARIUM GRAMINEARUM.
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(Peer Reviewed Journal)
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Li, W.L., Faris, J.D., Muthukrishnan, S., Liu, D.J., Chen, P.D., Gill, B.S. 2001. Isolation and characterization of novel cdna clones of acidic chitinases and beta-1,3-glucanases from wheat spikes infected by fusarium graminearum. Journal of Theoretical and Applied Genetics 102:353-362.
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ARS News Articles
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