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United States Department of Agriculture

Agricultural Research Service

Related Topics

Yong-Bao Pan
Sugarcane Research
Genetics

Phone: (985) 853-3165 ext. 165
Fax: (985) 868-8369

5883 USDA ROAD
HOUMA , LA 703605578

Projects
Effective Disease Management Through Enhancement of Resistant Sugarcane
Appropriated (D)
  Accession Number: 422832
Genetic Improvement of Sugarcane for Temperate Climates
Appropriated (D)
  Accession Number: 425242
Sugarcane Breeding, Varietal Development, and Disease Diagnosis (YUNNAN - CHINA)
Nonfunded Cooperative Agreement (N)
  Accession Number: 428157
Sugarcane Breeding, Varietal Development, and Disease Diagnosis (Guangxi - China)
Nonfunded Cooperative Agreement (N)
  Accession Number: 428175
Sugarcane Breeding, Varietal Development, and Disease Diagnosis (Fujian - CHINA)
Nonfunded Cooperative Agreement (N)
  Accession Number: 428234
Three-way (LSUAC, ASCL, ARS) Sugarcane Breeding and Variety Development Agreement
Nonfunded Cooperative Agreement (N)
  Accession Number: 422560
Improving Sugarcane Production Efficiency (ASCL)
Trust (T)
  Accession Number: 428910

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Development and integration of an SSR-based molecular identity database into sugarcane breeding program -
Pan, Y.-B. 2016. Development and integration of an SSR-based molecular identity database into sugarcane breeding program [Editorial]. Agronomy. 6(2):28. DOI:10.3390/agronomy6020028.
Balancing selection contributed to domestication of autopolyploid sugarcane (Saccharum officinarum L.) Reprint Icon -
Arro, J., Park, J., Man Wai, C., Van Buren, R., Pan, Y-B., Nagai, C., Da Silva, J., Ming, R. 2016. Balancing selection contributed to domestication of autopolyploid sugarcane (Saccharum officinarum L.). Euphytica. 209:477-493. DOI: 10.1007/s10681-016-1672-8
Rational regional distribution of sugarcane cultivars in China Reprint Icon -
Luo, J., Pan, Y.-B., Xu, L., Grisham, M.P., Zhang, H., Que, Y. 2015. Rational regional distribution of sugarcane cultivars in China. Scientific Reports. 5:15701. DOI: 10.1038/srep15721.
Identification of quantitative trait loci controlling sucrose content based on an enriched genetic linkage map of sugarcane (saccharum spp. hybrids) cultivar ‘LCP 85-384’ -
Pan, Y-B., Liu, P., Chandra, A., Que, Y., Chen, P., Grisham, M.P. 2016. Identification of quantitative trait loci controlling sucrose content based on an enriched genetic linkage map of sugarcane (saccharum spp. hybrids) cultivar ‘LCP 85-384’ [abstract]. International Plant and Animal Genome Conference, January 9-13, 2016, San Diego, CA.
Biplot evaluation of test environments and identification of mega-environments for sugarcane cultivars in China Reprint Icon -
Luo, J., Pan, Y.-B., Youxiong, Q., Zhang, H., Grisham, M.P., Liping, X. 2015. Biplot evaluation of test environments and identification of mega-environments for sugarcane cultivars in China. Scientific Reports. 5:15505. DOI: 10.1038/srep15505.
Impact of biotechnology on sugarcane agriculture and industry -
Pan, Y.-B. 2015. Impact of biotechnology on sugarcane agriculture and industry. Proceedings for International Conference on: World economics for sugar industry towards food and energy in a changed economic environment. November 7-10, 2015, Aswan, Egypt.
Identification of quantitative trait loci controlling sugar content based on an enriched genetic linkage map of sugarcane (Saccharum spp. hybrids) cultivar ‘LCP 85-384’ Reprint Icon -
Liu, P., Chandra, A., Que, Y., Chen, P., Grisham, M.P., White, W.H., Dalley, C.D., Tew, T.L., Pan, Y.-B. 2016. Identification of quantitative trait loci controlling sugar content based on an enriched genetic linkage map of sugarcane (Saccharum spp. hybrids) cultivar ‘LCP 85-384’. Euphytica. 207:527-549. DOI: 10.1007/s10681-015-1538-5.
Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids Reprint Icon -
Lu, X., Zhou, H., Pan, Y.-B., Chen, C.Y., Zhu, J., Chen, P., Cai, Q., Chen, R. 2015. Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids. Genetics and Molecular Research. 14(4):18384-18395. DOI: 10.4238/2015.December.23.26.
Genetic diversity analysis of sugarcane germplasm based on fluorescence-labeled simple sequence repeat markers and a capillary electrophoresis-based genotyping platform Reprint Icon -
You, Q., Pan, Y.-B., Xu, L.-P., Gao, S.-W., Wang, Q.-N., Su, Y.-C., Yang, Y.-Q., Wu, Q.-B., Zhou, D.-G., Que, Y.-X. 2016. Genetic diversity analysis of sugarcane germplasm based on fluorescence-labeled simple sequence repeat markers and a capillary electrophoresis-based genotyping platform. Sugar Tech. 18:380-390. DOI: 10.1007/s12355-015-0395-9.
Fluorescence- and capillary electrophoresis (CE)-based SSR DNA fingerprinting and a molecular identity database for the Louisiana sugarcane industry -
Pan, Y., Scheffler, B.E., Dufrene Jr, E.O., Waguespack, H., Grisham, M.P. 2015. Fluorescence- and capillary electrophoresis (CE)-based SSR DNA fingerprinting and a molecular identity database for the Louisiana sugarcane industry [abstract]. Sugar Journal. 78(1):16.
Genetic analysis of resistance gene analogues from a sugarcane cultivar resistant to red rot disease Reprint Icon -
Hameed, U., Pan, Y.-B., Iqbal, J. 2015. Genetic analysis of resistance gene analogues from a sugarcane cultivar resistant to red rot disease. Journal of Phytopathology. 163:755-763. DOI: 10.1111/jph.12372DOI:10.1111/jph.12372.
The latest progress in sugarcane molecular genetics research at the USDA-ARS, Sugarcane Research Laboratory -
Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids -
Pan, Y.-B., Lu, X., Zhou, H., Chen, C.Y., Zhu, J., Chen, P., Cai, Q., Chen, R. 2015. Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids [abstract]. Plant and Animal Genome XXIII Conference. Paper No. 13970. Available: https://pag.confex.com/pag/xxiii/webprogram/Paper13970.html
Allelic divergence and cultivar-specific SSR alleles revealed by capillary electrophoresis using fluorescence-labeled SSR markers in sugarcane Reprint Icon -
Chandra, A., Grisham, M.P., Pan, Y.-B. 2014. Allelic divergence and cultivar-specific SSR alleles revealed by capillary electrophoresis using fluorescence-labeled SSR markers in sugarcane. Genome. 57:363–372. DOI: 10.1139/gen-2014-0072.
Independently segregating simple sequence repeats (SSR) alleles in polyploid sugarcane Reprint Icon -
Pan, Y.-B., Liu, P., Que, Y. 2014. Independently segregating simple sequence repeats (SSR) alleles in polyploid sugarcane. Sugar Tech. 17(3):235-242. DOI: 10.1007/s12355-014-0330-5.
Photosynthetic and canopy characteristics of different varieties at the early elongation stage and their relationships with the cane yield in sugarcane Reprint Icon -
Luo, J., Pan, Y.-B., Xu, L., Zhang, Y., Zhang, H., Chen, R., Que, Y. 2014. Photosynthetic and canopy characteristics of different varieties at the early elongation stage and their relationships with the cane yield in sugarcane. The Scientific World Journal. 2014:1-9. Article ID 707095. DOI: 10.1155/2014/707095.
Cultivar evaluation and essential test locations identification for sugarcane breeding in China Reprint Icon -
Luo, J., Pan, Y.-B., Xu, L., Zhang, H., Yuan, Z., Deng, Z., Chen, R., Que, Y. 2014. Cultivar evaluation and essential test locations identification for sugarcane breeding in China. The Scientific World Journal. 2014:1-10. Article ID 302753. DOI: 10.1155/2014/302753.
Molecular cloning and functional analysis of an ethylene receptor gene from sugarcane (Saccharum spp.) by hormone and environmental stresses -
Wang, A., Ye, X., Huang, J., Niu, J., Liu, M., Pan, Y-B., Yang, L., Li, Y. 2015. Molecular cloning and functional analysis of an ethylene receptor gene from sugarcane (Saccharum spp.) by hormone and environmental stresses. Sugar Tech (Jan-Mar 2015) 17(1):22-30. DOI: 10.1007/s12355-014-0324-3.
Ho 07-613 – A potential new sugarcane variety for Louisiana -
White, W.H., Dufrene Jr, E.O., Verdun, D.L., Duet Jr, M.J., Hale, A.L., Landry, C.J., Grisham, M.P., Warnke, K.Z., Pan, Y.-B. 2014. Ho 07-613 – A potential new sugarcane variety for Louisiana [abstract]. Journal of the American Society of Sugar Cane Technologists. 34:61.
Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids -
Pan, Y.-B., Zhou, H., Chen, C.Y., Lu, X., Cai, Q., Zhu, J., Chen, P.H., Chen, R.K. 2014. Segregation analysis of microsatellite (SSR) markers in sugarcane polyploids. Journal of the American Society of Sugar Cane Technologists. 34:64-65.
Biogeographical variation and population genetic structure of sporisorium scitamineum in mainland China: Insights from ISSR and SP-SRAP markers Reprint Icon -
Xu, L., Lu, Y., You, Q., Liu, X., Grisham, M.P., Pan, Y.-B., Que, Y. 2014. Biogeographical variation and population genetic structure of sporisorium scitamineum in mainland China: Insights from ISSR and SP-SRAP markers. The Scientific World. 2014:1-13. Article ID 296020. DOI: 10.1155/2014/296020.
Genetic analysis of diversity within a Chinese local sugarcane germplasm based on start codon targeted polymorphism Reprint Icon -
Que, Y., Pan, Y.-B., Lu, Y., Yang, C., Yang, Y., Huang, N., Xu, L. 2014. Genetic analysis of diversity within a Chinese local sugarcane germplasm based on start codon targeted polymorphism. BioMed Research International. 2014:1-10. Article ID 468375. DOI: 10.1155/2014/468375.
Allelic divergence in sugarcane cultivars revealed through capillary electrophoregrams of fluorescence-labeled microsatellite markers -
Chandra, A., Grisham, M.P., Pan, Y-B. 2014. Allelic divergence in sugarcane cultivars revealed through capillary electrophoregrams of fluorescence-labeled microsatellite markers [abstract]. Plant and Animal Genome XXII Program. Available online: https://pag.confex.com/pag/xxii/webprogram/Paper11195.html.
Postharvest accumulation of resveratrol and piceatannol in sugarcane with enhanced antioxidant activity -
Boue, S.M., Shih, B.Y., Burow, M., Eggleston, G., Lingle, S.E., Pan, Y., Daigle, K.W., Bhatnagar, D. 2013. Postharvest accumulation of resveratrol and piceatannol in sugarcane with enhanced antioxidant activity. Journal of Agricultural and Food Chemistry. 61:8412-8419.
Effectiveness of molecular techniques in identification of Erianthus hybrids -
Pan, Y-B. 2013. Effectiveness of molecular techniques in identification of Erianthus hybrids [abstract]. International Workshop on Nobilisation of Erianthus, May 23-27, 2013, Fiji. Report available online: http://www.acp-srp.eu/sites/default/files/Rapport/cr%20fiji.pdf
Use of SSR markers for DNA fingerprinting and diversity analysis of Pakistani sugarcane (Saccharum spp. hybrids) cultivars -
Pan, Y-B., Hadeed, U., Khushi, M., Afghan, S., Iqbal, J. 2013. Use of SSR markers for DNA fingerprinting and diversity analysis of Pakistani sugarcane (Saccharum spp. hybrids) cultivars. Journal of the American Society of Sugar Cane Technologists. 33:23. Also available: http://www.assct.org/journal/JASSCT%20PDF%20Files/volume%2033/JASSCT_Abstracts_2013.pdf
Genetic variability among the chloroplast genomes of sugarcane (Saccharum spp.) and its wild progenitor species Saccharum spontaneum L. Reprint Icon -
Zhu, J.R., Zhou, H., Pan, Y.-B., Lu, X. 2014. Genetic variability among the chloroplast genomes of sugarcane (Saccharum spp.) and its wild progenitor species Saccharum spontaneum L. Genetics and Molecular Research. 13(2):3037-3047. DOI: 10.4238/2014.January.24.3.
Genetic variability among the chloroplast genomes of sugarcane (Saccharum spp.) and its wild progenitor species S. spontaneum L. -
Pan, Y.-B., Zhou, H., Zhu, J., Lu, X. 2012. Genetic variability among the chloroplast genomes of sugarcane (Saccharum spp.) and its wild progenitor species S. spontaneum L.[abstract]. Plant and Animal Genome XXI Conference, January 12-16, 2013, San Diego, CA. Available: https://pag.confex.com/pag/xxi/webprogram/Paper6132.html.
Molecular characterization and phylogenetic analysis of sugarcane yellow leaf virus isolates from China Reprint Icon -
Gao, S., Lin, Y.-H., Pan, Y.-B., Damaj, M.B., Wang, Q., Mirkov, T., Chen, R. 2012. Molecular characterization and phylogenetic analysis of sugarcane yellow leaf virus isolates from China. Virus Genes. 45:340-349. DOI 10:1007/s11262-012-0774-1.
Registration of ‘Ho 02-113’ Sugarcane -
Hale, A.L., Dufrene Jr, E.O., Tew, T.L., Pan, Y-B., Viator, R.P., White Jr, P.M., Veremis, J.C., White, W.H., Cobill, R., Richard, E.P., Rukavina, H., Grisham, M.P. 2012. Registration of ‘Ho 02-113’ Sugarcane. Journal of Plant Registrations. 7(1):51-57. DOI:10.3198/jpr2011.11.0605crc.
HoCP 04-838 – A new sugarcane variety for Louisiana -
Hale, A.L., White, W.H., Dufrene Jr, E.O., Tew, T.L., Grisham, M.P., Pan, Y., Miller, J.D. 2012. HoCP 04-838 – A new sugarcane variety for Louisiana. Journal of the American Society of Sugar Cane Technologists. 32:84.Available: http://www.assct.org/. Also published in Sugar Journal. 75(1):17-18.
Genome size variation in three Saccharum species Reprint Icon -
Zhang, J., Nagai, C., Yu, Q., Pan, Y., Ayala Silva, T., Schnell Ii, R.J., Comstock, J.C., Arumuganathan, A.K., Ming, R. 2012. Genome size variation in three Saccharum species. Euphytica. 185:511-519. DOI: 10.1007/S10681-012-0664-6.
Use of Simple Sequence Repeat (SSR) markers for DNA fingerprinting and diversity analysis of sugarcane (Saccharum spp.) cultivars resistant and susceptible to red rot -
Hameed, U., Pan, Y-B., Muhammad, K., Afghan, S., Iqbal, J. 2012. Use of simple sequence repeat (SSR) markers for DNA fingerprinting and diversity analysis of sugarcane (Saccharum spp) cultivars resistant and susceptible to red rot. Genetics and Molecular Research. 11(2):1195-1204.
Biotechnology: Impact on sugarcane agriculture and industry -
Pan, Y.-B. 2012. Biotechnology: Impact on sugarcane agriculture and industry. International Association of Professionals in Sugar and Integrated Technologies Conference (IAPSIT) International Sugar Conference (IS-2011), New Delhi, India, November 21 - 25, 2011. Available online. Sugar Tech (Jan-Mar 2012). 14(1):1-2. DOI: 10.1007/S12355-012-0136-2.
Segregation analysis of SSR markers in polyploidy sugarcane -
Pan, Y.-B., Liu, P., Que, Y. 2011. Segregation analysis of SSR markers in polyploidy sugarcane. International Plant and Animal Genome XX Conference.Poster Abstracts [online]. Available: http://pag.confex.com/pag/xx/webprogram/Paper3264.html
First report of ratoon stunt of sugarcane caused by Leifsonia xyl. subsp. xyli in Pakistan Reprint Icon -
Hussnain, S.Z., Afghan, S., Haq, M.I., Comstock, J.C., Mughal, S.M., Shahazad, A., Hussain, K., Nawaz, K., Pan, Y.-B., Jackson, P., Batool, A., Irfan, A. 2011. First report of ratoon stunt of sugarcane caused by Leifsonia xyl. subsp. xyli in Pakistan. Plant Dis. 95:1581.
Genetic structure and diversity of parental cultivars involved in China mainland sugarcane breeding programs as inferred from DNA microsatellites -
Qi, Y., Pan, Y.-B., Lao, F., Zhang, C., He, H., Fan, L., Wang, Q., Liu, S., Liu, F., Li, Q., Deng, H. 2012. Genetic structure and diversity of parental cultivars involved in China mainland sugarcane breeding programs as inferred from DNA microsatellites. Journal of Integrative Agriculture. 11(11):1794-1803.
Highly polymorphic microsatellite DNA markers for sugarcane germplasm evaluation and variety identity testing Reprint Icon -
Liu, P., Que, Y., Pan, Y.-B. 2011. Highly polymorphic microsatellite DNA markers for sugarcane germplasm evaluation and variety identity testing. Sugar Tech. 13(2):129-136.
Registration of ‘Ho 00-961’ sugarcane Reprint Icon -
White, W.H., Cobill, R.M., Tew, T.L., Burner, D.M., Grisham, M.P., Dufrene Jr, E.O., Pan, Y.-B., Richard Jr, E.P., Legendre, B.L. 2011. Registration of ‘Ho 00-961’ Sugarcane. Journal of Plant Registrations. 5(3):332-338.
A LCP 85-384 genetic linkage map enriched with polymorphic SSR markers -
Liu, P., Que, Y., Andru, S., Kimbeng, C.A., Pan, Y.-B. 2011. A LCP 85-384 genetic linkage map enriched with polymorphic SSR markers. Journal of the American Society of Sugar Cane Technologists. 31:57-58. Available: http://assct.org/journal/JASSCT%20PDF%20Files/Volume%2031/rpvASSCTabstracts2011.pdf
Genetic variability among the brown rust resistant and susceptible genotypes of sugarcane by RAPD technique -
Muhammad, K., Afghan, S., Pan, Y.-B., Iqbal, J. 2013. Genetic variability among the brown rust resistant and susceptible genotypes of sugarcane by RAPD technique. Pakistan Journal of Botany. 45(1):163-168.
Genetic analysis of the sugarcane (Saccharum spp.) cultivar LCP 85-384. I. linkage mapping using AFLP, SSR, and TRAP markers -
Andru, S., Pan, Y.-B., Thongthawee, S., Burner, D.M., Kimbeng, C.A. 2011. Genetic analysis of the sugarcane (Saccharum spp.) cultivar LCP 85-384. I. linkage mapping using AFLP, SSR, and TRAP markers. Theoretical and Applied Genetics. 123(1):77-93.
Databasing molecular identities of sugarcane (Saccharum spp.)clones constructed with microsatellite (SSR) DNA markers -
Pan, Y.-B. 2010. Databasing molecular identities of sugarcane (Saccharum spp.) clones constructed with microsatellite (SSR) DNA markers. American Journal of Plant Sciences. 1(2):87-94. DOI: 10.4236/ajps.2010.12011
Registration of 'HoCP 91-552' sugarcane Reprint Icon -
Tew, T.L., Dufrene Jr, E.O., Cobill, R.M., Garrison, D.D., White, W.H., Grisham, M.P., Pan, Y.-B., Legendre, B.L., Richard Jr, E.P., Miller, J.D. 2011. Registration of 'HoCP 91-552' sugarcane. Journal of Plant Registrations. 5:181-190.
Genetic diversity assessment of Saccharum species and elite cultivars from China using SSR markers -
Liang, J., Pan, Y.-B., Li, Y.-R., Fang, F.-X., Wu, K.-C., You, J.-H. 2010. Genetic diversity assessment of Saccharum species and elite cultivars from China using SSR markers. Guihaia. 30(5):594-600.
Detection of sugarcane yellow leaf virus by direct antigen coated enzyme-linked immunosorbent assay -
Gao, S., Pan, Y.-B., Chen, R.-K. 2010. Detection of sugarcane yellow leaf virus by direct antigen coated enzyme-linked immunosorbent assay. Chinese Journal of Tropical Crops. 31(8):1356-1361.
Development of a genetic linkage map for Louisiana sugarcane: New microsatellite (SSR) DNA markers identified for LCP 85-384 -
Pan, Y.-B., Liu, P. 2010. Development of a genetic linkage map for Louisiana sugarcane: New microsatellite (SSR) DNA markers identified for LCP 85-384 [abstract]. Journal of the American Society of Sugar Cane Technologists. 30:137.
Isolation and characterization of resistant gene analogs from RSD resistant and susceptible sugarcane clones: A progress report -
Hameed, U., Pan, Y.-B., Grisham, M.P., Iqbal, J. 2010. Isolation and characterization of resistant gene analogs from RSD resistant and susceptible sugarcane clones: A progress report [abstract]. Journal of the American Society of Sugar Cane Technologists. 30:153.
Identification of RAPD marker associated with brown rust resistance in sugarcane -
Muhammad, K., Pan, Y.-B., Grisham, M.P., Iqbal, J. 2010. Identification of RAPD marker associated with brown rust resistance in sugarcane [abstract]. Journal of the American Society of Sugar Cane Technologists. 30:138.
Genetic analysis of the sugarcane (Saccharum spp.) cultivar "LCP 85-384".II. identification of QTAs for starch -
Suman, A., Zhou, M.M., Pan, Y.-B., Kimbeng, C.A. 2010. Genetic analysis of the sugarcane (Saccharum spp.) cultivar "LCP 85-384".II. identification of QTAs for starch [abstract]. Journal of the American Society of Sugar Cane Technologists. 30:138.
Microsatellite (simple sequence repeat) marker-based paternity analysis of a seven-parent sugarcane polycross -
Tew, T.L., Pan, Y.-B. 2010. Microsatellite (simple sequence repeat) marker-based paternity analysis of a seven-parent sugarcane polycross. Crop Science. 50:1401-1408.
SSR marker-based analysis of genetic relatedness among sugarcane cultivars (Saccharum spp. hybrids) from breeding programs in China and other countries Reprint Icon -
Chen, P.-H., Pan, Y.-B., Chen, R.-K., Xu, L.-P., Chen, Y.-Q. 2009. SSR marker-based analysis of genetic relatedness among sugarcane cultivars (Saccharum spp. hybrids) from breeding programs in China and other countries. Sugar Tech. 11(4):347-354.
Assessment of genetic diversity in Saccharum using SSR markers and capillary electrophoresis -
Liang, J., Pan, Y.-B., Li, Y.-R., Fang, F.-X. 2010. Assessment of genetic diversity in Saccharum using SSR markers and capillary electrophoresis. Guihaia. 30(1):106-111.
Energy Cane Breeding and Selection in Louisiana - A Progress Report Reprint Icon -
Tew, T.L., Hale, A.L., Pan, Y.-B., Richard Jr, E.P. 2009. Energy Cane Breeding and Selection in Louisiana - A Progress Report. Available on International Society of Sugar Cane Technologists website: http://issct.intnet.mu
Databasing Molecular Identities of Louisiana, Florida, and Texas Sugarcane Clones -
Pan, Y.-B. Databasing Molecular Identities of Louisiana, Florida, and Texas Sugarcane Clones. J. Am. Soc. Sugar Cane Technol. 29:87.
A Genetic Linkage Map of Louisiana Sugarcane (Saccharum spp. hybrids) using AFLP and SSR Markers -
Pan, Y.-B., Suman, A., Zhou, M., Kimbeng, C.A., Scheffler, B.E., Grisham, M.P., Tew, T.L., White, W.H., Richard Jr, E.P. 2009. A Genetic Linkage Map of Louisiana Sugarcane (Saccharum spp. hybrids) using AFLP and SSR Markers. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper 58-1. Available: http://a-c-s.confex.com/crops/2009am/webprogram/Paper52547.html
Quick detection of Leifsonia xyli subsp. xyli by PCR and necleotide sequence analysis of PCR amplicons from Chinese Leifsonia xyli subsp. xyli isolates Reprint Icon -
Gao, S.-J., Pan, Y.-B., Chen, R.-K., Chen, P.-H., Zhang, H., Xu, L.-P. 2008. Quick detection of Leifsonia xyli subsp. xyli by PCR and necleotide sequence analysis of PCR amplicons from Chinese Leifsonia xyli subsp. xyli isolates. Sugar Tech. 10(4):334-340.
Registration of "HoCP 00-950" Sugarcane Reprint Icon -
Tew, T.L., Dufrene Jr, E.O., Garrison, D.D., White, W.H., Grisham, M.P., Pan, Y.-B., Richard Jr, E.P., Legendre, B.L., Miller, J.D. 2009. Registration of "HoCP 00-950" Sugarcane. Journal of Plant Registrations. 3(1):42-50. DOI:10.3198/jpr.2008.07.0430crc
Developing a sugarcane molecular identity database for use in breeding -
Pan, Y.-B., Scheffler, B.E., Richard Jr, E.P. 2008. Developing a sugarcane molecular identity database for use in breeding [abstract]. Available: http://www.issct.org/past-workshops/pathmbiolreport08.html. Also in: Proceedings IX Plant Pathology and VI Molecular Biology Workshop. June 23-27, 2008. Cali, Colombia. p. 6.
DNA Based Genetic Variation for Red Rot Resistance in Sugarcane -
Alvi, A.K., Iqbal, J., Shah, A.H., Pan, Y.-B. 2008. DNA Based Genetic Variation for Red Rot Resistance in Sugarcane. Pakistan Journal of Botany. 40(4):1419-1425.
Notice of Release of High-Fiber Sugarcane Variety HoCP 91-552 -
Tew, T.L., Dufrene Jr, E.O., Garrison, D.D., White, W.H., Grisham, M.P., Pan, Y.-B., Richard Jr, E.P., Legendre, B.L., Miller, J.D. 2007. Notice of release of high-fiber sugarcane variety HoCP 91-552. Sugar Bulletin. 85(10):25-26.
Notice of release of high-fiber sugarcane variety Ho 00-961 -
Tew, T.L., Dufrene Jr, E.O., Garrison, D.D., White, W.H., Grisham, M.P., Pan, Y.-B., Richard Jr, E.P., Legendre, B.L., Miller, J.D. 2007. Notice of release of high-fiber sugarcane variety Ho 00-961. Sugar Bulletin. 85(10):23-24.
A high-throughput procedure for single pollen grain collection and PCR -
Pan, Y.-B., Chen, P.-H., Chen, R.-K. 2008. A high-throughput procedure for single pollen grain collection and PCR. In: Final Abstracts Guide of the Plant and Animal Genome XVI. International Plant & Animal Genome XVI Conference, January 12-16, 2007, San Diego, California. p. 138.
Notice of release of sugarcane variety HoCP 00-950 -
Tew, T.L., Dufrene Jr, E.O., Garrison, D.D., White, W.H., Grisham, M.P., Pan, Y.-B., Richard Jr, E.P., Legendre, B.L., Miller, J.D. 2007. Notice of release of sugarcane variety HoCP 00-950. Sugar Bulletin. 85(9):21-23.
High-throughput procedure for single pollen grain collection and polymerase chain reaction in plants -
Chen, P.-H., Pan, Y.-B., Chen, R.-K. 2008. High-throughput procedure for single pollen grain collection and polymerase chain reaction in plants. Journal of Integrative Plant Biology. 50:375-383.
High-throughput genotyping of commercial sugarcane clones with microsatellite (SSR) DNA markers -
Pan, Y.-B., Scheffler, B.S., Richard, Jr., E.P. 2007. High-throughput genotyping of commercial sugarcane clones with microsatellite (SSR) DNA markers. Sugar Tech. 9:176-181.
RATING SUGARCANE VARIETIES FOR SUSCEPTIBILITY TO RSD WITH REAL-TIME PCR -
Grisham, M.P., Pan, Y.-B., Richard Jr, E.P. Rating Sugarcane Varieties for Susceptibility to RSD with Real-Time PCR [abstract]. 2007. Journal of the American Society of Sugar Cane Technologists. 27:60.
Genetic diversity and phylogenetic relationships among sugarcane and related species determined from microsatellite DNA data -
Pan, Y.-B. 2007. Genetic diversity and phylogenetic relationships among sugarcane and related species determined from microsatellite DNA data [abstract]. Journal of the American Society of Sugar Cane Technologists. 27:57.
HoCP 00-950: an early maturing variety for the Louisiana sugar industry -
Dufrene Jr, E.O., Tew, T.L., White, W.H., Grisham, M.P., Pan, Y.-B., Richard Jr, E.P. 2007. HoCP 00-950: An early maturing variety for the Louisiana sugar industry. Journal of the American Society of Sugar Cane Technologists. 27:55.
Using microsatellite DNA markers to determine the genetic identity of parental clones used in the Louisiana sugarcane breeding program -
Pan, Y.-B., Scheffler, B.E., Richard Jr, E.P. 2007. Using microsatellite DNA markers to determine the genetic identity of parental clones used in the Louisiana sugarcane breeding program. Journal of the American Society of Sugar Cane Technologists. 27:71.
A SHIFT IN THE VIRUS STRAINS THAT CAUSE MOSAIC IN LOUISIANA SUGARCANE -
Grisham, M.P., Pan, Y.B. 2007. A genetic shift in the virus strains that cause mosaic in Louisiana sugarcane. Plant Disease. 91:453-458.
EARLY DETECTION OF LEIFSONIA XYLI SUBSP. XYLI IN SUGARCANE LEAVES BY REAL-TIME PCR -
Grisham, M.P., Pan, Y., Richard Jr, E.P. 2007. Early detection of Leifsonia xyli subsp. xyli in sugarcane leaves by real-time polymerase chain reaction. Plant Disease. 91:430-434.
Highly polymorphic microsatellite DNA markers for sugarcane germplasm evaluation and variety identity testing -
Pan, Y.-B. 2006. Highly polymorphic microsatellite DNA markers for sugarcane germplasm evaluation and variety identity testing. Sugar Tech. 8(4):246-256.
MICROSATELLITE-BASED PATERNITY ANALYSIS OF A SEVEN-PARENT SUGARCANE POLYCROSS -
Tew, T.L., Pan, Y. 2006. Microsatellite-based paternity analysis of a seven-parent sugarcane polycross [abstract]. In: 8th International Society of Sugar Cane Technologists Breeding and Germplasm Workshop Abstract Book, May 1-5, 2006, Guayaquil-Ecuador. p. 5.
NON-CYTOPLASMIC PHENOTYPIC DIFFERENCES IN PROGENY OF A RECIPROCAL CROSS IN SUGARCANE -
Tew, T.L., Pan, Y. 2005. Non-Cytoplasmic Phenotypic Differences in Progeny of a Reciprocal Cross in Sugarcane [abstract]. Agronomy Society of America, Crop Science Society of America, Soil Science Society of America International Annual Meetings. Available: http://crops.confex.com/crops/2005am/techprogram/P5443.HTM
MOLECULAR ASSESSMENT OF THE FIDELITY OF SUGARCANE CROSSES WITH HIGH-THROUGHPUT MICROSATELLITE GENOTYPING -
Tew, T.L., Pan, Y. 2005. Molecular Assessment of the Fidelity of Sugarcane Crosses with High-Throughput Microsatellite Genotyping. Journal of the American Society of Sugar Cane Technologists. 25:119. Available: http://www.assct.org/journal/journal.htm
APPLICATION OF HIGH-THROUGHPUT DNA MARKER TECHNOLOGY IN SUGARCANE BREEDING: PHASE II - PCR AMPLIFICATION AND CAPILLARY ELECTROPHORESIS -
Pan, Y., Scheffler, B.E., Richard Jr, E.P. 2005. Application of High-Throughput DNA Marker Technology in Sugarcane Breeding: Phase II - PCR Amplification and Capillary Electrophoresis. Journal of the American Society of Sugar Cane Technologists. 25:117. Available: http://www.assct.org/journal/journal.htm
DETECTION AND QUANTIFICATION OF LEIFSONIA XYLI SUBSP. XYLI IN SUGARCANE BY REAL-TIME PCR -
Grisham, M.P., Pan, Y. 2005. Detection and Quantification of Leifsonia xyli subsp. xyli in Sugarcane by Real-Time PCR. Phytopathology. 95(6) (Supplement):S36.
Registration of 'Ho 95-988' sugarcane -
Tew, T.L., Burner, D.M., Legendre, B.L., White, W.H., Grisham, M.P., Dufrene, E.O., Garrison, D.D., Veremis, J.C., Pan, Y.-B., Richard, E.P. 2005. Registration of 'Ho 95-988' sugarcane. Crop Science. 45(4):1660-1661.
HIGHLY POLYMORPHIC MICROSATELLITE DNA MARKERS FOR U.S. SUGARCANE GERMPLASM EVALUATION AND VARIETY FINGERPRINTING -
Pan, Y.B., Comstock, J.C., Scheffler, B.E. 2005. Highly Polymorphic Microsatellite DNA Markers for U.S. Sugarcane Germplasm Evaluation and Variety Fingerprinting [abstract]. Guide of Plant and Animal Genome XIII. p. 36.
Microsatellite DNA marker-assisted selection of Saccharum spontaneum cytoplasm-derived germplasm -
Pan, Y.-B., Tew, T.L., Schnell, R.J., Viator, R.P., Veremis, J.C., Richard Jr, E.P., Grisham, M.P., White, W.H. 2004. Microsatellite DNA marker-assisted selection of Saccharum spontaneum cytoplasm-derived germplasm. In: Proceedings of International Symposium on Sustainable Sugarcane and Sugar Production Technology, November 29 - December 2, 2004, Nanning, China. p. 483-489.
NEW SACCHARUM HYBRIDS IN S. SPONTANEUM CYTOPLASM DEVELOPED THROUGH A COMBINATION OF CONVENTIONAL AND MOLECULAR BREEDING APPROACHES -
Pan, Y-B., Burner, D.M., Wei, Q., Cordeiro, G.M., Legendre, B.L., Henry, R.J. 2004. New Saccharum hybrids in S. spontaneum cytoplasm developed through a combination of conventional and molecular breeding approaches. Plant Genetic Resources: Characterization and Utilization. 2(2):131-139.
APPLICATION OF HIGH-THROUGHPUT DNA MARKER TECHNOLOGY IN SUGARCANE BREEDING: PHASE I - NUCLEIC ACIDS EXTRACTION -
Pan, Y., Veremis, J.C., Scheffler, B.E., Tew, T.L., Grisham, M.P., White, W.H., Richard Jr, E.P. 2004. High-throughput application of the DNA marker technology in sugarcane breeding: Phase I - DNA extraction [abstract]. Journal of the American Society of Sugar Cane Technologists. 24:117.
A Genetic Shift in the Predominant Virus Strain Causing Mosaic in Louisiana Sugarcane -
Grisham, M.P., Pan, Y. 2004. A Genetic Shift in the Predominant Virus Strain Causing Mosaic in Louisiana Sugarcane [abstract]. Phytopathology. 94(6):S36.
Molecular genotyping of sugarcane clones with microsatellite DNA markers -
Pan, Y.-B., Cordeiro, G.M., Richard Jr, E.P., Henry, R.J. 2003. Molecular genotyping of sugarcane clones with microsatellite DNA markers. Maydica. 48:319-329.
REGISTRATION OF 'HOCP 96-540' SUGARCANE -
Tew, T.L., White, W.H., Grisham, M.P., Dufrene Jr, E.O., Garrison, D.D., Veremis, J.C., Pan, Y.-B., Richard Jr, E.P., Legendre, B.L., Miller, J.D. 2005. Registration of 'HoCP 96-540' Sugarcane. Crop Science. 45:785-786.
NEW SACCHARUM HYBRIDS IN S. SPONTANEUM CYTOPLASM SELECTED WITH RAPD AND MICROSATELLITE MARKERS -
Pan, Y., Burner, D.M., Wei, Q., Cordeiro, G.M., Legendre, B.L., Henry, R.J. 2004. New saccharum hybrids in s. spontaneum cytoplasm selected with RAPD and microsatellite markers [abstract]. Plant and Animal Genome Abstracts. P235:130.
IDENTIFICATION OF VIRUS ISOLATES CAUSING MOSAIC OF SUGARCANE IN LOUSIANA -
Grisham, M.P., Pan, Y. 2003. Identification of virus isolates causing mosaic of sugarcane in Lousiana [abstract]. 8th International Congress on Plant Pathology, February 2-7, 2003, Christchurch, New Zealand. 2(23.31):308.
An assessment of the genetic diversity within a collection of Saccharum spontaneum L. with RAPD-PCR -
Pan, Y.-B., Burner, D.M., Legendre, B.L., Grisham, M.P., White, W.H. 2004. An assessment of the genetic diversity within a collection of Saccharum spontaneum L. with RAPD-PCR. Genetic Resources and Crop Evolution. 51(8):895-903.
A POTENTIAL NEW STRAIN OF SORGHUM MOSAIC VIRUS IN LOUISIANA -
Grisham, M.P., Pan, Y., Dufrene Jr, E.O. 2003. A potential new strain of sorghum mosaic virus in Louisiana [abstract]. Sugar Journal. 66(1):33.
Variability of the sugarcane mosaic virus complex in Louisiana -
Microsatellite DNA Fingerprints of Sugarcane Clones and Their Implications in Sugarcane Breeding -
Pan, Y., Richard Jr, E.P. 2003. Microsatellite DNA Fingerprints of Sugarcane Clones and Their Implications in Sugarcane Breeding [abstract]. Sugar Journal. 66(1):27.
Sugarcane microsatellites for the assessment of genetic diversity in sugarcane germplasm -
Cordeiro, G.M., Pan, Y.-B., Henry, R.J. 2003. Sugarcane microsatellites for the assessment of genetic diversity in sugarcane germplasm. Plant Science. 165:181-189.
Application of microsatellite and RAPD fingerprints in the Florida sugarcane variety program -
Pan, Y.-B., Miller, J.D., Schnell, R.J., Richard Jr, E.P., Wei, Q. 2003. Application of microsatellite and RAPD fingerprints in the Florida sugarcane variety program. Sugar Cane International. March/April 2003:19-28.
SELECTION OF DE NOVO SACCHARUM HYBRIDS WITH SACCHARUM SPONTANEUM CYTOPLASM USING MICROSATELLITE DNA MARKERS -
Pan, Y., Tew, T.L., Grisham, M.P., Richard Jr, E.P., White, W.H., Veremis, J.C. 2003. Selection of de novo saccharum hybrids with saccharum spontaneum cytoplasm using microsatellite DNA markers. 7th International Society of Breeding and Germplasm Workshop Abstract Book, May 5-9, 2003, Durban, South Africa. p. 17-18.
APPLICATION OF MICROSATELLITE AND RAPD FINGERPRINTS IN THE FLORIDA SUGARCANE VARIETY PROGRAM -
Pan, Y., Miller, J.D., Schnell Ii, R.J., Richard Jr, E.P., Wei, Q. 2003. Application of microsatellite and RAPD fingerprints in the Florida sugarcane variety program [abstract]. Plant and Animal Genome Abstract XI Abstract Book. W 189. p. 43
BOOK REVIEW COMMENTARY -
Pan, Y.-B. 2002. Book Review Commentary. Sugar Cane International: The Journal of Cane Agriculture. July/August Issue:10.
A Shift in the Strains of Sorghum Mosaic Virus Causing Mosaic in Louisiana Sugarcane -
Grisham, M.P., Pan, Y. 2002. A Shift in the Strains of Sorghum Mosaic Virus Causing Mosaic in Louisiana Sugarcane [abstract]. Phytopathology. 92(6):532.
MOLECULAR IDENTIFICATION OF VIRUS ISOLATES CAUSING MOSAIC IN LOUISIANA SUGARCANE -
Grisham, M.P., Pan, Y. 2002. Molecular identification of virus isolates causing mosaic in Louisiana sugarcane. Sugar Journal. 65(1):26-27.
MONITORING MOSAIC -
Grisham, M.P., Pan, Y. 2002. Monitoring mosaic [trade journal]. Sugar Bulletin. 80(9):29-31.
SELECTION OF INTERSPECIFIC SUGARCANE HYBRIDS USING MICROSATELLITE DNA MARKERS -
Pan, Y., Tew, T.L., Grisham, M.P., Richard Jr, E.P., White, W.H., Veremis, J.C. 2003. Selection of interspecific sugarcane hybrids using microsatellite DNA markers [abstract]. American Society of Sugar Cane Technologists. 23:103.
DEVELOPING SPECIES-SPECIFIC DNA MARKERS TO ASSIST IN SUGARCANE BREEDING -
Pan, Y., Burner, D.M., Wei, Q. 2001. Developing species-specific DNA markers to assist in sugarcane breeding. Proceedings of International Society of Sugar Cane Technologists Proceedings. 24:337-342.
SEARCH FOR DNA MARKERS TO ASSIST SUGARCANE BREEDING -
Pan, Y., Burner, D.M., Legendre, B.L. 2000. Search for dna markers to assist sugarcane breeding [abstract]. Plant and Animal Genome VIII Abstract. W120:29.
NUCLEOTIDE SEQUENCE POLYMORPHISMS AMONG THE 5S RRNA INTERGENIC SPACERS IN SUGARCANE AND RELATED TAXA -
Pan, Y., Burner, D.M., Legendre, B.L. Nucleotide sequence polymorphisms among the 5s rRNA intergenic spacers in sugarcane and related taxa. Genetica. 108:285-295.
POTENTIAL IMPACT OF BIOTECHNOLOGY ON SUGARCANE BREEDING -
ROLE OF CULTIVAR, CROP, INFECTION LEVEL, AND YEAR IN FIELD LOSSES OF SUGARCANE MOSAIC -
CURRENT STATUS ON BIOTECHNOLOGY RESEARCH AT SUGARCANE RESEARCH UNIT, HOUMA LOUISIANA -
Pan, Y., Burner, D.M., Grisham, M.P., Legendre, B.L., Wei, Q. 2000. Current status on biotechnology research at Sugarcane Research Unit, Houma, Louisiana [abstract]. Sugar Y Azucar. 95(6):17.
GENETIC DIVERSITY OF SACCHARUMSPONTANEUM ASSESSED WITH RAPDS -
BURNER, D.M., PAN, Y., LEGENDRE, B.L. 1999. GENETIC DIVERSITY OF SACCHARUMSPONTANEUM ASSESSED WITH RAPDS. AMERICAN SOCIETY OF AGRONOMY. 91:162.
MARKER-ASSISTED SUGARCANE BREEDING -
Pan, Y., Legendre, B.L., Burner, D.M. 1999. Marker-assisted sugarcane breeding [abstract]. Sugar y Azycar. 94(6):27.
A PROGRESS REPORT ON BIOTECHNOLOGY RESEARCH AT SUGARCANE RESEARCH UNIT, HOUMA, LOUISIANA -
APPLICATION OF RAPD TECHNOLOGY TO SUGARCANE BREEDING AND SELECTION -
DEVELOPMENT OF POLYMERASE CHAIN REACTION PRIMERS HIGHLY SPECIFIC FOR XANTHOMONAS ABILINEANS, THE CASUAL BACTERIUM OF SUGARCANE LEAF SCALD DISEASE -
DISTRIBUTION OF THE LEAF SCALD PATHOGEN IN INFECTED SUGARCANE STALKS -
DETECTING SUGARCANE DISEASE PATHOGENS BY DNA BASED TECHNOLOGY -
MOLECULAR MARKER-ASSISTED SUGARCANE BREEDING -
MOLECULAR MARKER-ASSISTED SUGARCANE BREEDING -
Pan, Y., Burner, D.M., Legendre, B.L. 2000. Molecular marker-assisted sugarcane breeding. Proceedings of Inter-American Sugar Cane Seminars. 1:31-37.
DNA-BASED MOLECULAR DIAGNOSTIC PROTOCOLS FOR SUGARCANE BACTERIAL DISEASES -
SPECIES-SPECIFIC PCR MARKERS FOR SELECTION OF INTERSPECIFIC SUGARCANE HYBRIDS -
DETECTING CLAVIBACTER XYLI SUBSP. XYLI BY TISSUE BLOT HYBRIDIZATION WITH A POLYMERASE CHAIN REACTION-DERIVED DNA PROBE -
SPECIES-SPECIFIC PCR MARKERS FOR SUGARCANE AND RELATED TAXA -
A POLYMERASE CHAIN REACTION PROTOCOL FOR THE DETECTION OF CLAVIBACTER XYLI SUBSP. XYLI,THE CASUAL BACTERIUM OF SUGARCANE RATOON STUNTING DISEASE -
PCR PRIMERS HIGHLY SPECIFIC FOR XANTHOMONAS ALBILINEANS. -
DETECTION AND IDENTIFICATION OF CLAVIBACTER XYLI SUBSP. XYLI USING PCR WITH A PAIR OF HIGHLY SPECIFIC PRIMERS. -
POLYMERASE CHAIN REACTION (PCR) PROTOCOLS FOR DETECTING THE BACTERIA THAT CAUSE LEAF SCALD AND RATOON STUNTING DISEASES OF SUGARCANE. -
DISTRIBUTION OF THE LEAF SCALD PATHOGEN IN INFECTED SUGARCANE STALKS. -
DETECTING CLAVIBACTER XYLI SUBSP. XYLI USING TISSUE BLOT HYBRIDIZATION WITHA PCR-DERIVED DNA PROBE. -
GENETIC SIMILARITY OF NEW WORLD AND OLD WORLD SACCHARUM ASSESSED BY RAPD ANALYSIS -
CYTOLOGICAL AND MOLECULAR STUDIES OF SACCHARUM SPP. NATIVE TO NORTH AMERICA -
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Last Modified: 5/2/2016
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