Melissa Jia
Dale Bumpers National Rice Research Center
Geneticist Plants
Phone: (870) 672-6130
Fax: (870) 673-7581
2890 HWY 130 EAST
STUTTGART, AR 72160
Publications
(Clicking on the reprint icon
will take you to the publication reprint.)
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Enhancing the searchability, breeding utility and efficient management of germplasm accessions in the USDA-ARS rice collection
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(Peer Reviewed Journal)
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McClung, A.M., Edwards, J., Jia, M.H., Huggins, T.D., Bockelman, H.E., Ali, L., Eizenga, G.C. 2020. Enhancing the searchability, breeding utility and efficient management of germplasm accessions in the USDA-ARS rice collection. Crop Science. https://doi.org/10.1002/csc2.20256.
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Characterization of rice blast resistance gene Pi-z (t) in rice germplasm using DNA markers and Pathogenicity assays
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(Abstract Only)
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Roy-Chowdhury, M., Jia, Y., Jackson, A.K., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2010. Characterization of rice blast resistance gene Pi-z (t) in rice germplasm using DNA markers and Pathogenicity assays. In: 87th Meeting of the Southern Division of the American Phytopathological Society, Orlando, FL, February 7-8-2010.
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Efficient accession management and characterization of the USDA-ARS rice germplasm collection through phenotyping and genotyping
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(Abstract Only)
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Huggins, T.D., McClung, A.M., Edwards, J., Jia, M.H., Bockelman, H.E., Ali, M.L., Eizenga, G.C. 2020. Efficient accession management and characterization of the USDA-ARS rice germplasm collection through phenotyping and genotyping. Meeting Abstract.
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Co-evolutionary mechanisms of Oryza sativa and Magnaporthe oryzae pathosystem
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(Abstract Only)
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Jia, Y., Wang, X., Jia, M.H., Wamishe, Y., Valent, B. 2020. Co-evolutionary mechanisms of Oryza sativa and Magnaporthe oryzae pathosystem [abstract]. Plant and Animal Genome Conference, San Diego, California, January 11-15, 2020.
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Identification of critical amino acid residues in Ptr mediated plant innate immunity
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(Abstract Only)
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Jia, Y., Zhai, H., Jia, M.H., Liu, Y. 2020. Identification of critical amino acid residues in Ptr mediated plant innate immunity [abstract]. Plant and Animal Genome Conference, San Diego, California, January 11-15, 2020.
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SNP markers for panicle architecture and grain traits based on RDP1 GWA-QTL and available for japonica rice improvement
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(Abstract Only)
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Eizenga, G.C., Jackson, A.K., Jia, M.H., Edwards, J., McClung, A.M. 2019. SNP markers for panicle architecture and grain traits based on RDP1 GWA-QTL and available for japonica rice improvement. Abstract, Plant and Animal Genome Conference XXVIII, San Diego, California, January 11-15, 2020.
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SNP markers for panicle architecture and grain traits developed from GWA-QTL and available for japonica rice improvement
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(Abstract Only)
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Eizenga, G.C., Jackson, A.K., Jia, M.H., Edwards, J., McClung, A.M. 2019. SNP markers for panicle architecture and grain traits developed from GWA-QTL and available for japonica rice improvement. Abstract, Plant and Animal Genome Conference XXVIII, San Diego, California, January 11-15, 2020.
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Curating the USDA-ARS rice germplasm collection: efficient accession management and characterization through phenotyping and genotyping
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(Proceedings)
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Phylogenetic origin and dispersal pattern of Taiwan weedy rice.
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(Peer Reviewed Journal)
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Wu, D., Gealy, D.R., Jia, M.H., Edwards, J., Lai, M., McClung, A.M. 2019. Phylogenetic origin and dispersal pattern of Taiwan weedy rice. Pest Management Science. https://doi.org/10.1002/ps.5683.
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Development and characterization of a large mutant population of a rice variety Katy for functional genomics studies and breeding
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(Peer Reviewed Journal)
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Jia, Y., Wang, Z., Jia, M.H., Rutger, J.N., Moldenhauer, K. 2019. Development and characterization of a large mutant population of a rice variety Katy for functional genomics studies and breeding. Crop Breeding, Genetics and Genomics. https://doi.org/10.20900/cbgg20190014.
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Registration of the ‘Estrela/NSFTV199’ Rice Recombinant Inbred Line Mapping Population
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(Peer Reviewed Journal)
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Eizenga, G.C., Chen, M., Jia, M.H., Jackson, A.K., Edwards, J. 2019. Registration of the ‘Estrela/NSFTV199’ Rice Recombinant Inbred Line Mapping Population. Journal of Plant Registrations. 13:469-478.
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A toolbox for managing blast and sheath blight diseases of rice in the United States of America
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Jia, Y., Jia, M.H., Want, X., Zhao, H. 2019. A toolbox for managing blast and sheath blight diseases of rice in the United States of America. Book Chapter. https://doi.org/10.5772/intechopen.86901.
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Functional characterization of a new class of rice blast resistance gene Ptr
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(Abstract Only)
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Jia, Y., Zhao, H., Wang, X., Minkenberg, B., Wheatley, M., Fan, J., Jia, M.H., Famoso, A., Edwards, J., Wamishe, Y., Valent, B., Want, G., Yang, Y. 2019. Functional characterization of a new class of rice blast resistance gene Ptr. Plant and Animal Genome Conference.
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Validation of yield component traits identified by GWA mapping in a tropical japonica x tropical japonica rice mapping population
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(Peer Reviewed Journal)
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Eizenga, G.C., Jia, M.H., Jackson, A.K., Boykin, D.L., Liakat, A.M., Shakiba, E., Tran, N.T., McCouch, S.R., Edwards, J. 2018. Validation of yield component traits identified by GWA mapping in a tropical japonica x tropical japonica rice mapping population. The Plant Genome. https://doi.org/10.3835/plantgenome2018.04.0021.
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Identifying panicle architecture traits for rice improvement: a treasure hunt from genome-wide association studies to QTL validation, marker development and germplasm release
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(Abstract Only)
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Eizenga, G.C., Jackson, A.K., Jia, M.H., Edwards, J., McClung, A.M. 2018. Identifying panicle architecture traits for rice improvement: a treasure hunt from genome-wide association studies to QTL validation, marker development and germplasm release. Available: http://ricecongress2018.irri.org/conference-program.
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The rice blast resistance gene Ptr encodes an atypical protein required for broad spectrum disease resistance
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(Peer Reviewed Journal)
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Zhao, H., Wang, X., Jia, Y., Minkenberg, B., Wheatley, M., Fan, J., Jia, M.H., Famoso, A., Edwards, J., Wamishe, Y., Valent, B., Wang, G., Yang, Y. 2018. The rice blast resistance gene Ptr encodes an atypical protein required for broad spectrum disease resistance. Nature Communications. https://doi.org:10.1038/s41467-018-04369-4.
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Functional interactions of major rice blast resistance genes Pi-ta with Pi-b and minor blast resistance QTLs
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(Peer Reviewed Journal)
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Chen, X., Jia, Y., Jia, M.H., Pinson, S.R., Wang, X., Wu, B. 2018. Functional interactions of major rice blast resistance genes Pi-ta with Pi-b and minor blast resistance QTLs. Phytopathology. https://doi.org/10.1094/PHYTO-02-18-0032-R.
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Novel QTLs affecting rice kernel fissure resistance discovered in the cultivar ‘Saber’ augment those from ‘Cybonnet’
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(Peer Reviewed Journal)
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Pinson, S.R., Jia, Y., Jia, M.H., Gibbons, J.W. 2018. Novel QTLs affecting rice kernel fissure resistance discovered in the cultivar ‘Saber’ augment those from ‘Cybonnet’. Crop Science. https://doi.org:10.2135/cropsci2017.10.0593.
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Increasing the efficiency and effectiveness of curation of the USDA-ARS world rice collection
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(Proceedings)
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McClung, A.M., Bockelman, H.E., Jia, M.H., Edwards, J. 2018. Increasing the efficiency and effectiveness of curation of the USDA-ARS world rice collection. Proceedings of 37th Rice Technical Working Group Meeting, February 19-22, 2018, Long Beach, California. p 79. Electronic Publication.
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Dynamic changes of rice blast fungus in the USA through six decades
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(Proceedings)
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Jia, Y., Wang, X., Bianco, T.A., Jia, M.H., Wamishe, Y., Valent, B. 2018. Dynamic changes of rice blast fungus in the USA through six decades. Proceedings of 37th Rice Technical Working Group Meeting, February 19-22, 2018, Long Beach, California. p 91. Electronic Publication.
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Developing molecular markers for use in marker-assisted selection from rice genome-wide association studies
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(Proceedings)
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Eizenga, G.C., Edwards, J., Jackson, A.K., Jia, M.H., Boykin, D.L. 2018. Developing molecular markers for use in marker-assisted selection from rice genome-wide association studies. Rice Technical Working Group Meeting Proceedings. February 19-22, 2018, San Diego, California. p. 71-72.
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Validation of yield component traits identified by GWA mapping in a rice tropical japonica x tropical japonica RIL mapping population
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(Abstract Only)
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Eizenga, G.C., Jia, M.H., Jackson, A.K., Boykin, D.L., Ali, L.M., Shakiba, E., McCouch, S.R., Edwards, J.D. 2017. Validation of yield component traits identified by GWA mapping in a rice tropical japonica x tropical japonica RIL mapping population. Crop Science Society of America. https://scisoc.confex.com/scisoc/2017am/webprogram/Paper106518.html.
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Dynamic changes in the rice blast population in the USA over six decades
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(Peer Reviewed Journal)
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Wang, X., Jia, Y., Wamishe, Y., Jia, M.H., Valent, B. 2017. Dynamic changes in the rice blast population in the USA over six decades. Molecular Plant-Microbe Interactions. https://doi:10.1094/MPMI-04-17-0101-R.
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Genetic analysis of genetic basis of a physiological disorder "straighthead’’ in rice (Oryza sativa L.)
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(Peer Reviewed Journal)
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Li, X., Yan, W., Agrama, H., Jackson, A.K., Jia, M.H., Jia, L., Moldenhauer, K., Correa, F., Wu, D. 2016. Genetic analysis of genetic basis of a physiological disorder "straighthead’’ in rice (Oryza sativa L.). Genes and Genomics. doi: 10.1007/s13258-016-0394-6.
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Genome-wide association of rice blast disease resistance and yield-related components of rice
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(Peer Reviewed Journal)
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Wang, X., Jia, M.H., Ghai, P., Lee, F.N., Jia, Y. 2015. Genome-wide association of rice blast disease resistance and yield-related components of rice. Molecular Plant-Microbe Interactions. 28(12):1383-1392. doi.org/10.1094/MPMI-06-15-0131-R.
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Confirming and identifying new loci for rice blast disease resistance using magnaporthe oryzae field isolates in the US
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(Peer Reviewed Journal)
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Xing, J., Jia, M.H., Correll, J.C., Yuan, L., Deng, H., Jia, Y. 2015. Confirming and identifying new loci for rice blast disease resistance using magnaporthe oryzae field isolates in the US. Crop Science. 55:2620-2627. doi: 10.2135/cropsci2015.02.0077.
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Exploring sheath blight quantitative trait loci in a Lemont/O. meridionalis advanced backcross population
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(Peer Reviewed Journal)
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Eizenga, G.C., Jia, M.H., Pinson, S.R., Gasore, E.R., Prasad, B. 2015. Exploring sheath blight quantitative trait loci in a Lemont/O. meridionalis advanced backcross population. Molecular Breeding. 35(6):140. doi:10.1007/s11032-015-0332-3.
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Development of molecular markers for breeding for disease resistant crops
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(Proceedings)
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Jia, Y., Liu, Y., Wang, X., Scheuermann, K., Jia, M.H., Mcclung, A.M. 2015. Development of molecular markers for breeding for disease resistant crops. Permanent identification: urn:nbn:de:0294-sp-2015-1-2. Proceedings of XVIII International Plant Protection Congress. August 24-28, 2015. Berlin, Germany. OBT3, Page 88.
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Registration of a rice gene mapping population of Lemont X Jasmine 85 recombinant inbred lines
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(Peer Reviewed Journal)
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Jia, Y., Liu, G., Jia, M.H., McClung, A.M. 2014. Registration of a rice gene mapping population of Lemont X Jasmine 85 recombinant inbred lines. Journal of Plant Registrations. 9:128-132.
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Identification of candidate genes associated with positive and negative heterosis in rice
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(Peer Reviewed Journal)
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Venu, R.C., Ma, J., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M.V., Moldenhauer, K., McClung, A.M., Meyers, B.C., Wang, G. 2014. Identification of candidate genes associated with positive and negative heterosis in rice. PLoS One. 9(4):e95178.
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Characterization of rice blast resistance gene Pi61(t) in rice germplasm
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(Peer Reviewed Journal)
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Ma, J., Jia, M.H., Jia, Y. 2014. Characterization of rice blast resistance gene Pi61(t) in rice germplasm. Plant Disease. 98(9):1200-1204.
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Elucidation of molecular dynamics of invasive species of rice
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(Proceedings)
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Yan, L., Qin, X., Vigueira, C., Jia, M.H., Jia, Y., Gealy, D.R., Olsen, K., Caicedo, A., Burgos, N. 2014. Elucidation of molecular dynamics of invasive species of rice. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.94. Feb 18-21, 2014. CDROM.
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Identification of candidate genes associated with heterosis in rice
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(Proceedings)
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Venu, R.C., Ma, J., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M.V., Moldenhauer, K., McClung, A.M., Meyers, B.C., Wang, G. 2014. Identification of candidate genes associated with heterosis in rice. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.53. Feb 18-21, 2014. CDROM.
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Tagging quantitative trait loci for heading date and plant height in important breeding parents of rice (Oryza sativa)
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(Peer Reviewed Journal)
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Lee, S., Jia, M.H., Jia, Y., Liu, G. 2014. Tagging quantitative trait loci for heading date and plant height in important breeding parents of rice (Oryza sativa). Euphytica. 197(2):191-200. DOI 10.1007/s10681-013-1051-7.
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Association mapping of four important traits using the USDA rice mini-core collection
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Yan, W., Jackson, A.K., Jia, M.H., Zhou, W., Xiong, H., Bryant, R.J. 2014. Association mapping of four important traits using the USDA rice mini-core collection. In Rice - Germplasm, Genetics and Improvement, Wengui Yan and Jinsong Bao (Ed.). Book Chapter. pp. 105–142. doi: 10.5772/56830.
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Analysis of rice PDR-like ABC transporter genes in sheath blight resistance
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(Abstract Only)
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Lee, S., Sing, P., Jia, M.H., Jia, Y. 2013. Analysis of rice PDR-like ABC transporter genes in sheath blight resistance. American Phytopathological Society Abstracts. 50-O.
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Identification of rice sheath blight and blast quantitative trait loci in two different O. satival/O. nivara advanced backcross populations
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(Peer Reviewed Journal)
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Eizenga, G.C., Prasad, B., Jackson, A.K., Jia, M.H. 2013. Identification of rice sheath blight and blast quantitative trait loci in two different O. satival/O. nivara advanced backcross populations. Molecular Breeding. 31(4):889-907. doi: 10.1007/s11032-013-9843-y.
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Molecular mapping of four blast resistance genes using recombinant inbred lines of 93-11 and nipponbare
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(Peer Reviewed Journal)
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Hongmei, Y., Jia, M.H., Jia, Y., Venus, R., Wang, Z., Sun, C., Wang, G. 2013. Molecular mapping of four blast resistance genes using recombinant inbred lines of 93-11 and nipponbare. Journal of Plant Biology. 56:91-97.
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Field performance of STG06L-35-061, a new genetic resource developed from crosses between weed-suppressive indica rice and commercial southern U.S. long-grains
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(Peer Reviewed Journal)
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Gealy, D.R., Moldenhauer, K., Jia, M.H. 2013. Field performance of STG06L-35-061, a new genetic resource developed from crosses between weed-suppressive indica rice and commercial southern U.S. long-grains. Plant and Soil. 370(1):277-293.
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Field performance and genetic makeup of RU1001161, a good quality selection from crosses between weed-suppressive indica rice and commercial U.S. southern long grains
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(Abstract Only)
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Gealy, D.R., Moldenhauer, K., Jia, M.H. 2012. Field performance and genetic makeup of RU1001161, a good quality selection from crosses between weed-suppressive indica rice and commercial U.S. southern long grains. 6th World Congress on Allelopathy. Dec. 15-19, 2011. Guangzhou, China. pg. 114.
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Development of genetic markers linked to straighthead resistance through fine mapping in rice (Oryza sativa L.)
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(Peer Reviewed Journal)
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Pan, X., Zhang, Q., Yan, W., Jia, M.H., Jackson, A.K., Li, X., Jia, L., Xu, P., Correa-Victoria, F., Li, S. 2012. Development of genetic markers linked to straighthead resistance through fine mapping in rice (Oryza sativa L.). PLoS One. 7(12):e52540.
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Similar traits, different genes? Examining convergent evolution in related weedy rice populations
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(Peer Reviewed Journal)
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Thurber, C.S., Jia, M.H., Jia, Y., Caicedo, A. 2013. Similar traits, different genes? Examining convergent evolution in related weedy rice populations. Molecular Ecology. 22:685-698. doi: 10.1111/mec.12147.
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Establishment and application of an efficient, economic, and rapid rice DNA extraction method
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(Peer Reviewed Journal)
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Zhao, G., Jia, Y., Deren, C.W., Yan, Z., Jia, M.H., Dai, L. 2012. Establishment and application of an efficient, economic, and rapid rice DNA extraction method. Chinese Journal of Rice Science. 26(4):495-499.
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Indica and Japonica crosses resulting in linkage block and recombination suppression on rice chromosome 12
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(Peer Reviewed Journal)
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Jia, Y., Jia, M.H., Wang, Z., Liu, G. 2012. Indica and Japonica crosses resulting in linkage block and recombination suppression on rice chromosome 12. PLoS One. 7(8):Article e43066.
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Identification of the rice blast resistance gene Pi-b in the national small grains collection
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(Peer Reviewed Journal)
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RoyChowdhury, M., Jia, Y., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2012. Identification of the rice blast resistance gene Pi-b in the national small grains collection. Phytopathology 102(7):700-706.
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Genetic analysis of atypical U.S. red rice phenotypes: indications of
prior gene flow in rice fields?
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(Peer Reviewed Journal)
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Gealy, D.R., Agrama, H., Jia, M.H. 2012. Genetic analysis of atypical U.S. red rice phenotypes: indications of prior gene flow in rice fields? Weed Science. 60:451-461. DOI: 10.1614/WS-D-11-00159.1.
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A major gene resistant to straighthead was identifed using two RIL populations
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(Proceedings)
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Xuhao, P., Yan, W., Jia, M.H., Jackson, A.K., Jia, L., Qijun, Z., Pizhou, X., Bihu, H., Femando, C., Shigui, L. 2013. A major gene resistant to straighthead was identifed using two RIL populations. Rice Technical Working Group Meeting Proceedings. Feb.27-Mar.1,2012. Hot Springs, AR. pg. 45.
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Understanding rice heterosis using deep sequencing
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(Abstract Only)
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Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K.A., Pellgrini, M., Jacobsen, S.E., Mcclung, A.M. 2012. Understanding rice heterosis using deep sequencing. Rice Technical Working Group Meeting Proceedings. Feb. 27 - Mar. 1, 2012. Hot Springs, AR. pg. 46-47..
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Identification of expressed genes in the mapped QTLs for yield related traits in rice
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(Abstract Only)
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Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K.A., Pellgrini, M., Jacobsen, S.E., Mcclung, A.M. 2012. Identification of expressed genes in the mapped QTLs for yield related traits in rice. Rice Technical Working Group Meeting Proceedings. Feb. 27 - Mar. 1, 2012. Hot Springs, AR. pg. 61.
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Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA
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(Peer Reviewed Journal)
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Lee, S., Jia, Y., Jia, M.H., Gealy, D.R., Olsen, K.M., Caicedo, A.L. 2011. Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA. PLoS One. 6(10):e26260. doi:10.1371/journal.pone.0026260.
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Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines
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(Peer Reviewed Journal)
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Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Wang, Y., Tabien, R.E., Li, Z. 2012. Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines. Journal of Plant Registrations. 6(1):128-135. doi: 10.3198/jpr2011.02.0066crmp.
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Registration of four rice germplasm lines with improved resistance to sheath blight and blast diseases
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(Peer Reviewed Journal)
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Jia, Y., Liu, G., Correa-Victoria, F.J., Mcclung, A.M., Oard, J.H., Bryant, R.J., Jia, M.H., Corell, J.C. 2012. Registration of four rice germplasm lines with improved resistance to sheath blight and blast diseases. Journal of Plant Registrations. 6(1):95-100.
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Analysis of rice blast resistance gene Pi-z in rice germplasm using pathogenicity assays and DNA markers
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(Peer Reviewed Journal)
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RoyChowdhury, M., Jia, Y., Jackson, A.K., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2012. Analysis of rice blast resistance gene Pi-z in rice germplasm using pathogenicity assays and DNA markers. Euphytica. 184:35-46.
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Release of four new breeding lines having resistance to blast and sheath blight diseases
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Jia, Y., Bryant, R.J., Jia, M.H., McClung, A.M., Liu, G., Oard, J., Correa, F. 2011. Release of four new breeding lines having resistance to blast and sheath blight diseases. Texas Rice Special Section, Highlighting Research in 2011. p. VIII-IX.
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Molecular mapping of yield related traits in a recombinant inbred line population of a Nipponbare x 93-11 cross and identification of candidate genes associated with heterosis in rice
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(Abstract Only)
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Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K., Pellegrini, M., Jacobsen, S., McClung, A.M., Meyers, B., Wang, G. 2011. Molecular mapping of yield related traits in a recombinant inbred line population of a Nipponbare x 93-11 cross and identification of candidate genes associated with heterosis in rice [abstract]. American Society of Plant Biologists Annual Meeting, Minneapoli, Minnesota. Abstract P15068.
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A rice diversity panel evaluated for genetic and agro-morphological diversity between subpopulations and its geographic distribution
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(Peer Reviewed Journal)
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Liakat Ali, M., McClung, A.M., Jia, M.H., Kimball, J.A., McCouch, S.R., Eizenga, G.C. 2011. A rice diversity panel evaluated for genetic and agro-morphological diversity between subpopulations and its geographic distribution. Crop Science. 51(5):2021-2035. doi: 10.2135/cropsci2010.11.0641
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“Rice Diversity Panel”: A Genetic Resource for Exploring Phenotype-Genotype Associations in O. sativa.
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(Abstract Only)
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Ali, M., Goodall, D., Jia, M.H., Tung, C., Wright, M.H., Zaho, K., Bustamante, C.D., Mcclung, A.M., Mccouch, S.R., Eizenga, G.C. 2010. “Rice Diversity Panel”: A Genetic Resource for Exploring Phenotype-Genotype Associations in O. sativa.. Plant and Animal Genome Conference. http://www.intl-pag.org/19/abstracts/P05b_PAGXIX_255.html.
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Linkage Block and Recombination Suppression at the Pi-ta locus at the Centromere Region of Rice Chromosome 12
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(Abstract Only)
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Jia, Y., Jia, M.H., Liu, G. 2011. Linkage Block and Recombination Suppression at the Pi-ta locus at the Centromere Region of Rice Chromosome 12. American Phytopathology Society. 101:S82.
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Characterization of the Pi-b Rice Blast Resistance Gene in the National Small Grains
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(Abstract Only)
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Roychowdhury, M., Jia, Y., Jia, M.H., Fjellstrom, R.G., Cartwright, R.D. 2011. Characterization of the Pi-b Rice Blast Resistance Gene in the National Small Grains. American Phytopathology Society. 101:S156.
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Genotypic and phenotypic characterization of genetic differentiation and diversity in the USDA rice mini-core collection
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(Peer Reviewed Journal)
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Li, X., Yan, W., Agrama, H., Hu, B., Jia, L., Jia, M.H., Jackson, A.K., Moldenhauer, K., McClung, A.M., Wu, D. 2010. Genotypic and phenotypic characterization of genetic differentiation and diversity in the USDA rice mini-core collection. Genetica. 138(11):1221-1230.
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Mapping Blast and Sheath Blight QTL in an Advanced Backcross Bengal/O. nivara (Wild2) Population
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(Abstract Only)
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Eizenga, G.C., Prasad, B., Jackson, A.K., Jia, M.H. 2010. Mapping Blast and Sheath Blight QTL in an Advanced Backcross Bengal/O. nivara (Wild2) Population. American Society of Agronomy Abstracts.
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Development of strategies to manage rice blast disease in the USA
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(Proceedings)
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Jia, Y., Lin, M.J., Dai, Y., Costanzo, S., Lee, S., Rubinelli, F.G., Green, E.A., Jia, M.H., Mcclung, A.M., Fjellstrom, R.G., Correll, J.C., Roy-Chowdhury, M., Cartwright, R., Lee, F.N., Moldenhauer, K.K., Liu, G., Zhou, X.G., Wang, X., Wu, D., Rioux, R.A., Tavantzis, S., Xing, J., Yan, L., Singh, P. 2010. Development of strategies to manage rice blast disease in the USA. Symposium Proceedings. IV-P-62.
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Evolutionary dynamics and structure of the rice blast resistance locus Pi-ta in wild, cultivated, and US weedy rice
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(Abstract Only)
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Lee, S., Jia, Y., Costanzo, S., Olsen, K.M., Caicedo, A., Gealy, D.R., Jia, M.H. 2010. Evolutionary dynamics and structure of the rice blast resistance locus Pi-ta in wild, cultivated, and US weedy rice [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Abstract II-CO-85.
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Identification of rice blast resistant gene Pi-z(t) in NSGC using DNA markers and pathogenicity assays
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(Abstract Only)
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Roy-Chowdhury, M., Jia, Y., Jia, M.H., Jackson, A.K., Fjellstrom, R.G., Cartwright, R.D. 2010. Identification of rice blast resistant gene Pi-z(t) in NSGC using DNA markers and pathogenicity assays [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract IV-CP-51.
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Identification and QTL mapping of blast resistance in wild Oryza species
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(Proceedings)
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Eizenga, G.C., Prasad, B., Jackson, A.K., Jia, M.H. 2010. Identification and QTL mapping of blast resistance in wild Oryza species. p. 95 In: Proc. 5th Int. Rice Blast Conf. 12-14 Aug. 2010. Little Rock, Arkansas USA.
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Geographic description of genetic diversity and genetic relationships in the USDA Rice World Collection
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(Peer Reviewed Journal)
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Yan, W., Agrama, H., Jia, M.H., Fjellstrom, R.G., McClung, A.M. 2010. Geographic description of genetic diversity and genetic relationships in the USDA Rice World Collection. Crop Science. 50:2406-2417.
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Genetic structure associated with diversity and geographic distribution in the USDA rice world collection
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(Peer Reviewed Journal)
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Agrama, H.A., Yan, W., Jia, M.H., Fjellstrom, R.G., McClung, A.M. 2010 Genetic structure associated with diversity and geographic distribution in the USDA rice world collection. Natural Science. 2(4):247-291.
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A “Rice Diversity Panel” evaluated for genetic and agro-morphological variation between subpopulations
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(Proceedings)
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Ali, M., Hancock, T.A., Jia, M.H., McCouch, S.R., Zhao, K., Tung, C., Wright, M., Reynolds, A., Bustamante, C.D., McClung, A.M., Eizenga, G.C. 2010. A “Rice Diversity Panel” evaluated for genetic and agro-morphological variation between subpopulations. In: Proceedings 33rdRice Technical Working Group Meetings, February 22-25, 2010, Biloxi, MS. CDROM
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Characterization of the Recombinant Inbred Line Population Derived from the Cross of Nipponbare/9311
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(Proceedings)
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Liu, G., Jia, Y., Jia, M.H., Venu, R., Wang, G., Meyers, B., McClung, A.M. 2010. Characterization of the Recombinant Inbred Line Population Derived from the Cross of Nipponbare/9311. In: Proceedings of the 33rd Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
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Linkage Drag: Implication for Plant Breeding
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(Proceedings)
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Jia, Y., Costanzo, S., Lee, S., Lin, M.J., Jia, M.H. 2010. Linkage Drag: Implication for Plant Breeding. In: Proceedings of the 33rd Rice Technical Working Group Meeting. CDROM.
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A “Rice Diversity Panel” Evaluated For Variation In Agro-Morphological And Grain Quality Traits Among The Genetically Defined Subpopulations
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(Abstract Only)
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Ali, ML, Eizenga GC, Jia MH, McClung AM, McCouch SR. 2010. A “Rice Diversity Panel” Evaluated for variation in agro-morphological and grain quality traits among the genetically defined subpopulations. 2010. In: Proc. of the Plant & Animal Genomes XVIII Conf. 9-13 Jan. 2010. San Diego, California. Available at: http://www.intl-pag.org/18/abstracts/P05b_PAGXVIII_254.html
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A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values
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(Proceedings)
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Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Yang, Y., Tabien, R.E., Li, Z. 2009. A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values. 6th International Rice Genetics Symposium on Nov. 16-18, 2009, Manilla, Philippines. P9-1 Page 215.
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A diverse collection of purified rice (O. sativa) accessions evaluated for genetic and agro-morphological diversity between sub-populations
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(Proceedings)
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Eizenga, G.C., Ali, M., Jia, M.H., Kimball, J.A., Bustamante, C.R., Mccouch, S.R., Mcclung, A.M. 2009. A diverse collection of purified rice (O. sativa) accessions evaluated for genetic and agro-morphological diversity between sub-populations. International Rice Genetics Symposium.
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Characterization of Pi-ta Blast resistance gene in an international rice core collection
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(Peer Reviewed Journal)
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Wang, X., Fjellstrom, R.G., Jia, Y., Yan, W., Jia, M.H., Scheffler, B.E., Wu, D., Shu, Q., McClung, A.M. 2010. Characterization of Pi-ta Blast resistance gene in an international rice core collection. Plant Breeding. 129(5):491-501.
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Genetic structural analysis for germplasm accessions in the USDA Rice World Collection
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(Abstract Only)
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Agrama, H., Yan, W., Fjellstrom, R.G., Jia, M.H., McClung, A.M. 2009. Genetic structural analysis for germplasm accessions in the USDA Rice World Collection [abstract}. Proceedings of 2009 International Annual Meetings of ASA-CSSA-SSSA, November 1-5, 2009, Pittsburgh, Pennsylvania. CDROM.
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Geographic diversity assessed by molecular markers in the USDA rice world collection
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(Abstract Only)
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Yan, W., Agrama, H.A., Jia, M.H., Fjellstrom, R.G., Mcclung, A.M. 2009. Geographic diversity assessed by molecular markers in the USDA rice world collection. American Society of Agronomy Abstracts. Paper 52131.
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Identification of two major resistance genes against race IE-1k of Magnaporthe oryzae in the indica rice cultivar ZHE733
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(Peer Reviewed Journal)
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Lee, S., Wasmishe, Y., Jia, Y., Liu, G., Jia, M.H. 2009. Identification of two major resistance genes against race IE-1k of Magnaporthe oryzae in the indica rice cultivar ZHE733. Molecular Breeding. 24:127-134.
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Factors affecting the outcrossing rate between Clearfield rice and red rice (Oryza sativa)
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(Peer Reviewed Journal)
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Shivrain, V.K., Burgos, N.R., Salesa, M.A., Mauromoustakos, A., Gealy, D.R., Smith, K.L., Black, H.L., Jia, M.H. 2009. Factors affecting the outcrossing rate between Clearfield rice and red rice (Oryza sativa). Weed Science. 57:394-403.
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Mapping two major resistance genes in an indica cultivar Zhe733 to the race IE-1K of Magnaporthe oryzae
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(Proceedings)
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Lee, S., Wamishe, Y., Jia, Y., Liu, G., Jia, M.H. 2009. Mapping two major resistance genes in an indica cultivar Zhe733 to the race IE-1K of Magnaporthe oryzae. In: Proceedings of Plant and Animal Genome XVII Conference, January 10-14-2009, San Diego, CA. W506.
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Worldwide distribution and origin of rice blast resistance gene Pi-ta
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(Proceedings)
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Xueyan, W., Fjellstrom, R.G., Jia, Y., Yan, W., Jia, M.H., Scheffler, B.E., Dianxing, W., Qingyao, S., McClung, A.M. 2009. Worldwide distribution and origin of rice blast resistance gene Pi-ta. In: Proceedings of the Plant and Animal Genome Conference XVII, January 10-14-2009, San Diego, CA. P116.
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A diverse collection of purified rice accessions for genomic studies
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(Proceedings)
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Ali Md. Liakat, Eizenga, G.C., Jia, M.H., Kimball, J.A., Iorga, R., McCouch, S.R., McClung, A.M. 2009. A diverse collection of purified rice accessions for genomic studies. In: Proceedings of Plant and Animal Genome Conference XVII, January 10-14, 2009, San Diego, CA. P. 226.
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Genetic assessment of a mini-core subset developed from the USDA rice genebank
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(Peer Reviewed Journal)
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Agrama, H.A., Yan, W., Lee, F.N., Fjellstrom, R.G., Chen, M., Jia, M.H., McClung, A.M. 2009. Genetic assessment of a mini-core subset developed from the USDA rice genebank. Crop Science. 49:1336-1346.
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Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles
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(Peer Reviewed Journal)
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Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Jia, M.H., Jia, Y., Fjellstrom, R.G., Mackill, D., Li, Z. 2008. Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles. Journal of Plant Registrations. 2(3):251-254.
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Genetic diversity and relationships assessed by SSRs in the USDA Rice Germplasm Collection
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(Abstract Only)
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Agrama, H., Yan, W., Fjellstrom, R.G., Jia, M.H., McClung, A.M. 2008. Genetic diversity and relationships assessed by SSRs in the USDA Rice Germplasm Collection. American Society of Agronomy Abstracts. p. 552-5.
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Mapping of a genetic component required for Pi-ta-mediated signal recognition
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(Proceedings)
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Costanzo, S., Jia, M.H., Jia, Y. 2008. Mapping of a genetic component required for Pi-ta-mediated signal recognition. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
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Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation
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(Proceedings)
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Pinson, S.R., Wang, Y., Liu, G., Jia, M.H., Jia, Y., Sharma, A., Fjellstrom, R.G., Tabien, R.E. 2008. Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
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Identification of Sheath Blight Resistance QTLs in Rice Using Recombinant Inbred Line Population of Lemont X Jasmine 85
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(Proceedings)
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Liu, G., Jia, Y., Correa, F., Jia, M.H., McClung, A.M., Groth, D., Correll, J.C., Rutger, J.N. 2008. Identification of sheath blight resistance QTLs in rice using recombinant inbred line population of Lemont X Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
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Molecular Characterization of the Recombinant Inbred Line Population of the Cross of Lemont with Jasmine 85
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(Proceedings)
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Liu, G., Jia, Y., Jia, M.H., McClung, A.M., Correll, J.C. 2008. Molecular characterization of the recombinant inbred line population of the cross of Lemont with Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
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A new rice gene-mapping population containing indica chromosomal segments introgressed into a tropical japonica background
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(Abstract Only)
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Pinson, S.R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A. 2007. A new rice gene-mapping populatin containing indica chromosomal segments introgressed into a tropical japonica background. [abstract] American Society of Agronomy Abstracts. p.277-6.
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RL-SAGE and microarray analysis of the rice defense transcriptome after Rhizoctonia solani infection
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(Peer Reviewed Journal)
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Venu, R.C., Jia, Y., Gowda, M., Jia, M.H., Jantasuriyarat, C., Stahlbert, E., Li, H., Rhineheart, A., Reddy, P., Singh, P., Rutger, J.N., Kudrna, D., Wing, R., Nelson, J.C., Wang, G. 2007. Rl-sage and microarray analysis of the rice defense transcriptome after Rhizoctonia solani infection. Molecular Genetics and Genomics. 278:421-431.
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Molecular dynamics of interactions of rice with rice blast and sheath blight pathogens
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(Proceedings)
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Jia, Y., Jia, M.H., Gubrij, K.I., Wang, G. 2007. Molecular dynamics of interactions of rice with rice blast and sheath blight pathogens. [abstract] American Phytopathological Society, July 28 - August 1, 2007, San Diego, CA. 97:S52.
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New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations
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(Proceedings)
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Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G. 2007. New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations. [abstract]. Plant and Animal Genome Conference XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.
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Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing
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(Proceedings)
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Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A., Li, Z., Pinson, S.R. 2007. Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing. Plant and Animal Genome Conference Proceedings.
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MOLECULAR CHARACTERIZATION OF RICE RECOMBINANT INBRED LINE POPULATION DERIVED FROM A JAPONICA-INDICA CROSS
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(Peer Reviewed Journal)
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Liu, G., Bernhardt, J., Jia, M.H., Wamishe, Y., Jia, Y. 2007. Molecular characterization of rice recombinant inbred line population derived from a japonica-indica cross. Euphytica. 159:73-82.
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INCORPORATING FOREIGN SHEATH BLIGHT RESISTANCE GENES INTO US RICE GEMPLASM
()
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Pinson, S.R., Fjellstrom, R.G., Shank, A.R., Oard, J., Groth, D., Jia, Y., Jia, M.H. 2006. Incorporating foreign sheath blight resistance genes into us rice gemplasm. Texas Rice, Highlighting Research 2006. pp.VI-VII.
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DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANTS ALTERED IN THE RICE BLAST RESISTANT GENE PI-TA-MEDIATED DISEASE RESISTANCE PATHWAY
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(Abstract Only)
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Jia, Y., Fjellstrom, R.G., Jia, Melissa H., Yan, W., Rutger, J.N., McClung, A.M. 2006. Development and characterization of rice mutants altered in the rice blast resistant gene pi-ta-mediated disease resistance pathway [abstract]. American Phytopathological Society Annual Meeting. Phytopathology. 96:S54.
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RL-SAGE ANALYSIS OF THE RICE DEFENSE TRANSCRIPTOME DURING RICE AND RHIZOCTONIA SOLANI INTERACTION
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(Abstract Only)
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Venu, R.C., Jia, Y., Gowda, M., Jia, M.H., Bellizzi, M., Singh, P., Rutger, J.N., Wang, G. 2006. Rl-sage analysis of the rice defense transcriptome during rice and Rhizoctonia solani interaction [abstract]. American Phytopathological Society Abstracts. 96.
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CHARACTERIZATION OF SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI AND ITS MOLECULAR INTERACTION WITH ORYZA SATIVA
()
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Jia, Y., Singh, P., Wamishe, Y., Jia, M.H., Gowda, M., Channaryappa, V.R., Zhou, E., Flowers, C., Lin, M.J., Wang, G.L., Rutger, J.N. 2006. Characterization of sheath blight pathogen Rhizoctonia solani and its molecular interaction with Oryza sativa. Bulletin for Biochemistry and Biotecnology of SAAS. Available: http//orgs.tntech.edu/saas/.
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MOLECULAR MECHANISMS OF BLAST RESISTANCE GENE PI-TA MEDIATED DEFENSE RESPONSE
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(Abstract Only)
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Jia, Y., Lin, M.J., Jia, M.H., Gubrij, K.I. 2006. Molecular mechanisms of blast resistance gene pi-ta mediated defense response [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 29 - March 1, 2006, Houston, Texas. 2006. CDROM.
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IDENTIFICATION OF NOVEL BLAST RESISTANCE GENES IN RICE CULTIVAR ZHE733
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(Abstract Only)
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Wamishe, Y., Jia, Y., Jia, M.H., Liu, G. 2006. Identification of novel blast resistance genes in rice cultivar zhe733 [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28, 2006 - March 1, 2006, Houston, Texas. 2006. CDROM.
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MOLECULAR CHARACTERIZATION OF RICE RECOMBINANT INBRED LINE POPULATION DERIVED FROM A JAPONICA-INDICA CROSS
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(Abstract Only)
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Liu, G., Bernhardt, J., Jia, M.H., Wamishe, Y., Jia, Y. 2006. Molecular characterization of rice recombinant inbred line population derived from a japonica-indica cross. Rice Technical Working Group Meeting Proceedings, Houston, Texas, February 29-March 2, 2006. 2006. CDROM.
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DEVELOPMENT OF MOLECULAR STRATEGIES TO CONTROL RICE SHEATH BLIGHT DISEASE
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(Abstract Only)
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Jia, Y., Singh, P., Jia, M.H., Wang, G., Wamishe, Y., Zhu, L., Zhou, E. 2006. Development of molecular strategies to control rice sheath blight disease [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28 - March 1, 2006, Houston, Texas. 2006. CDROM.
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BRINGING QUANTITATIVE TRAITS UNDER BREEDER CONTROL BY COMBINING QTL MAPPING WITH CANDIDATE GENE APPROACHES: A CASE STUDY OF RICE SHEATH BLIGHT RESISTANCE
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(Proceedings)
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Pinson, S.R., Jia, Y., Fjellstrom, R.G., Jia, M.H., Hulbert, S., Liu, K., Nelson, J.C. 2006. Bringing quantitative traits under breeder control by combining QTL mapping with candidate gene approaches: A case study of rice sheath blight resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
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TRANSLATIONAL GENOMICS: A CASE STUDY OF RICE PI-TA RESISTANCE GENE
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(Abstract Only)
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Jia, Y., Zhou, E., Winston, E., Singh, P., Wang, Z., Correll, J., Lee, F., Jia, M.H. 2005. Translational genomics: a case study of rice Pi-ta resistance gene. In: Proceedings of International Conference on Plant Molecular Breeding, October 27-30, 2005. p. 3.
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TWO MAJOR RESISTANCE GENES CONFER RESISTANCE TO RACE SHIFT ISOLATES OVERCOMING BLAST RESISTANCE GENC PI-TA
()
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Jia, Y., Wamishe, Y., Jia, M.H., Lin, M.J., Eizenga, G.C., Gibbons, J.W., Moldenhauer, K..K.., Correll, J.C. 2005. Two major resistance genes confer resistance to race shift isolates overcoming blast resistance genc Pi-ta. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.S.K., editors. B.R.Wells Rice Research Studies 2004, Arkansas Agricultural Experiment Station Research Series 529. p. 91-95 Available: http//www.uark.edu/depts/agripub/Publications/researchseries/.
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MOLECULAR COEVOLUTION OF RICE RESISTANCE GENE PI-TA AND THE CORRESPONDING MAGNAPORTHE GRISEA AVIRULANCE GENE AVR-PITA
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(Abstract Only)
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Jia, Y., Winston, E.M., Singh, P., Zhou, E., Wamishe, Y., Jia, M.H., Correll, J., Rutger, J.N. 2005. Molecular coevolution of rice resistance gene pi-ta and the corresponding Magnaporthe grisea avirulance gene avr-pita [abstract]. In: Plant and Animal Genome Conference Proceedings. p. 74.
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MOLECULAR MECHANISMS OF DURABLE RICE BLAST RESISTANCE
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(Abstract Only)
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Jia, Y., Winston, E.M., Singh, P., Zhou, E., Wamishe, Y., Jia, M.H., Correll, J. 2004. Molecular mechanisms of durable rice blast resistance [abstract]. In: Proceedings, 2nd International Rice Functional Genomics Conference, Tucson, Arizona. Abstract p. 72.
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GENOTYPING AND PHENOTYPING THE USDA RICE CORE COLLECTION
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(Abstract Only)
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Yan, W., Bockelman, H.E., Tai, T., Jia, M.H., Rutger, J.N. 2004. Genotyping and phenotyping the USDA rice core collection [abstract]. Proceedings, 2nd International Rice Functional Genomics Conference, Tucson, Arizona. Paper No. 173.
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ARS News Articles
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