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ARS Home » Northeast Area » Wyndmoor, Pennsylvania » Eastern Regional Research Center » Molecular Characterization of Foodborne Pathogens Research » People & Locations » Yiping He
Yiping He
Molecular Characterization of Foodborne Pathogens Research
Research Molecular Biologist

Phone: (215) 233-6422
Fax: (215) 233-6581

USDA,REE,ARS,NAA,ERRC
600 E MERMAID LANE
ERRC
WYNDMOOR , PA 190388598
Projects
Development of Portable Detection and Quantification Technologies for Foodborne Pathogens
In-House Appropriated (D)
  Accession Number: 431165

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Rapid and potentially portable detection and quantification technologies for foodborne pathogens -
Gehring, A.G., Armstrong, C.M., Capobianco Jr, J.A., He, Y., Paoli, G., Fratamico, P.M. 2017. Rapid and potentially portable detection and quantification technologies for foodborne pathogens . United States-Japan Cooperative Program in Natural Resources (UJNR). p.12.
Genetic basis for the resistance of Staphylococcus aureus to peptidoglycan hydrolase by comparative transcriptome and whole genome sequence analysis -
Whole genome sequencing and analysis of Campylobacter coli YH502 from retail chicken reveals a plasmid-borne type VI secretion system Reprint Icon -
Ghatak, S., He, Y., Reed, S.A., Strobaugh Jr, T.P., Irwin, P.L. 2017. Whole genome sequencing and analysis of Campylobacter coli YH502 from retail chicken reveals a plasmid-borne type VI secretion system. Genomics Data. 11:128-131.
Evaluation of ELISA tests specific for Shiga toxin 1 and 2 in food and water samples Reprint Icon -
Gehring, A.G., Fratamico, P.M., Lee, J., Ruth, L., He, X., He, Y., Paoli, G., Stanker, L.H., Rubio, F.M. 2017. Evaluation of ELISA tests specific for Shiga toxin 1 and 2 in food and water samples. Food Control. 77:145-149.
Study on the mechanism of antibacterial action of magnesium oxide nanoparticles against foodborne pathogens Reprint Icon -
He, Y., Ingudam, S., Reed, S.A., Gehring, A.G., Strobaugh Jr, T.P., Irwin, P.L. 2016. Study on the mechanism of antibacterial action of magnesium oxide nanoparticles against foodborne pathogens. Journal of Nanobiotechnology (Biomed Central Open Access). DOI:10.1186/s12951-016-0202-0.
Antimicrobial properties and mechanism of magnesium oxide nanoparticles on Campylobacter, E. coli O157:H7, and Salmonella -
Reed, S.A., Ingudum, S., Irwin, P.L., He, Y. 2015. Antimicrobial properties and mechanism of magnesium oxide nanoparticles on Campylobacter, E. coli O157:H7, and Salmonella. Meeting Abstract. meeting abstract.
An improved method to simultaneously detect Salmonella enteritidis, Escherichia coli O157 and Listeria monocytogenes in ground black pepper using multiplex real-time PCR -
Complete genome sequence of Campylobacter jejuni YH001 from beef liver which contains a novel plasmid -
He, Y., Yan, X., Reed, S.A., Xie, Y., Chen, C., Irwin, P.L. 2015. Complete genome sequence of Campylobacter jejuni YH001 from beef liver which contains a novel plasmid. Genome Announcements. 3(1):e01492-14.
Near-quantitative extraction of genomic DNA from various food-borne eubacteria -
Irwin, P.L., Nguyen, L.T., He, Y., Paoli, G., Gehring, A.G., Chen, C. 2014. Near-quantitative extraction of genomic DNA from various food-borne eubacteria. BMC Microbiology. DOI: 10.1186/s12866-014-0326-z.
Rapid identification and classification of Campylobacter spp. using laser optical scattering technology Reprint Icon -
He, Y., Reed, S.A., Bhunia, A.K., Gehring, A.G., Nguyen, L.T., Irwin, P.L. 2015. Rapid identification and classification of Campylobacter spp. using laser optical scattering technology. Food Microbiology. 47:28-35.
Variability in DNA polymerase efficiency: effects of random error, DNA extraction method, and isolate type -
Irwin, P.L., Nguyen, L.T., Chen, C., He, Y. 2014. Variability in DNA polymerase efficiency: effects of random error, DNA extraction method, and isolate type. JSM Mathematics & Statistics. 1(1):1003.
A high-throughput, precipitating colorimetric sandwich ELISA microarray for shiga toxins Reprint Icon -
Gehring, A.G., He, X., Fratamico, P.M., Lee, J., Bagi, L.K., Brewster, J.D., Paoli, G., He, Y., Xie, Y., Skinner, C.B., Barnett, C., Harris, D. 2014. A high-throughput, precipitating colorimetric sandwich ELISA microarray for shiga toxins. Toxins. 6:1855-1872.
A robust multiplex real-time PCR method for simultaneous detection of Salmonella spp., Escherichia coli O157 and Listeria monocytogenes in fresh fruits and vegetables -
Simultaneous detection of Salmonella spp., Escherichia coli O157 and Listeria monocytogenes in a variety of cheeses and spinach using a multiplex real-time PCR method -
Pulsed-field gel electrophoresis typing of Staphylococcus aureus isolates -
He, Y., Xie, Y., Reed, S.A. 2013. Pulsed-field gel electrophoresis typing of Staphylococcus aureus isolates. In: Walker, John M. Methods in Molecular Biology. New York, NY:Humana Press. p. 103-111.
High-throughput antibody microarray for bacteria and toxins -
Optimization and application of a custom microarray for the detection and genotyping of E. coli O157:H7 in fresh meat samples Reprint Icon -
Suo, B., He, Y., Irwin, P.L., Gehring, A.G. 2013. Optimization and application of a custom microarray for the detection and genotyping of E. coli O157:H7 in fresh meat samples. Journal of Food Analytical Methods. 6:1477-1484.
Non-stochastic sampling error in quantal analyses for Campylobacter species on poultry products Reprint Icon -
Irwin, P.L., Reed, S.A., Brewster, J.D., Nguyen, L.T., He, Y. 2013. Non-stochastic sampling error in quantal analyses for Campylobacter species on poultry products. Analytical and Bioanalytical Chemistry. 405(7):2353-2369.
A multiplex real-time PCR method for simultaneous detection of Salmonella spp., Escherichia coli O157 and Listeria monocytogenes in soft cheese -
Rapid identification and classification of Staphylococcus aureus by attenuated total reflectance fourier transform infrared spectroscopy -
Xie, Y., Xu, S., Hu, Y., Chen, W., He, Y., Shi, X. 2012. Rapid identification and classification of Staphylococcus aureus by attenuated total reflectance fourier transform infrared spectroscopy. Journal of Food Safety. 32(2):176-183.
Genotypes and enterotoxin gene profiles of Staphylococcus aureus clinical isolates from China -
Xie, Y., He, Y., Gehring, A.G., Hu, Y., Tu, S., Shi, X. 2011. Genotypes and enterotoxin gene profiles of Staphylococcus aureus clinical isolates from China. PLoS One. DOI: 10.1371/journal.pone.0028276.
Antibacterial activities of magnesium oxide (MgO) nanoparticles against foodborne pathogens -
Jin, Z.T., He, Y. 2012. Antibacterial activities of magnesium oxide (MgO) nanoparticles against foodborne pathogens. Journal of Nanoparticle Research. 13:6877-6885.
Antimicrobial activity of spherical silver nanoparticles: evidence for induction of a prolonged bacterial lag phase -
Effects of polyphosphate additives on the pH of processed chicken exudates and the survival of Campylobacter Reprint Icon -
Gunther, N.W., He, Y., Fratamico, P.M. 2011. Effects of polyphosphate additives on the pH of processed chicken exudates and the survival of Campylobacter. Journal of Food Protection. 74:1735-1740.
Antibacterial activity and mechanism of action of zinc oxide nanoparticles against Campylobacter jejuni -
Xie, Y., He, Y., Irwin, P.L., Jin, Z.T., Shi, X. 2011. Antibacterial activity and mechanism of action of zinc oxide nanoparticles against Campylobacter jejuni. Applied and Environmental Microbiology. 77:2325-2331.
Antimicrobial activity of spherical silver nanoparticles prepared using a biocompatible macromolecular capping agent: evidence for induction of a greatly prolonged bacterial lag phase -
Irwin, P.L., Martin, J., Nguyen, L.T., He, Y., Gehring, A.G., Chen, C. 2010. Antimicrobial activity of spherical silver nanoparticles prepared using a biocompatible macromolecular capping agent: evidence for induction of a greatly prolonged bacterial lag phase. Journal of Nanobiotechnology (Biomed Central Open Access). 34:1-12.
Simultaneous detection of Escherichia coli O157:H7 and Salmonella Typhimurium: The use of magnetic beads conjugated with multiple capture antibodies -
Tu, S., Reed, S.A., Gehring, A.G., He, Y. 2010. Simultaneous detection of Escherichia coli O157:H7 and Salmonella Typhimurium: The use of magnetic beads conjugated with multiple capture antibodies. Journal of Food Analytical Methods. DOI 10.1007/s12161-010-9175-z.
Simultaneous detection and differentiation of Campylobacter jejuni, C. coli, and C. lari in chickens by multiplex real-time PCR -
He, Y., Yao, X., Gunther, N.W., Tu, S., Shi, X. 2010. Simultaneous detection and differentiation of Campylobacter jejuni, C. coli, and C. lari in chickens by multiplex real-time PCR. Journal of Food Analytical Methods. 137:168-174.
A multiplex real-time PCR for simultaneous detection of Salmonella spp., E. coli O157 and L. monocytogenes in meat products -
Suo, B., He, Y., Tu, S., Shi, X. 2010. A multiplex real-time PCR for simultaneous detection of Salmonella spp., E. coli O157 and L. monocytogenes in meat products. Foodborne Pathogens and Disease. 7(6):619-628.
QUANTIFICATIVE ANALYSIS OF VIABLE, STRESSED AND DEAD CELLS OF CAMPYLOBACTER JEJUNI STRAIN 81-176 -
He, Y., Chen, C. 2010. QUANTIFICATIVE ANALYSIS OF VIABLE, STRESSED AND DEAD CELLS OF CAMPYLOBACTER JEJUNI STRAIN 81-176. Food Microbiology. 27:439-446.
Development of an oligonucleotide-based microarray to detect multiple foodborne pathogens -
Suo, B., He, Y., Paoli, G., Gehring, A.G., Tu, S., Shi, X. 2009. Development of an oligonucleotide-based microarray to detect multiple foodborne pathogens. Molecular and Cellular Probes. 24:77-86.
A microarray approach for simultaneous detection of multiple pathogens in food -
Development of an oligonucleotide-based microarray to detect multiple foodborne pathogens -
Suo, B., He, Y., Paoli, G., Gehring, A.G., Tu, S. 2009. Development of an oligonucleotide-based microarray to detect multiple foodborne pathogens. Meeting Abstract. 1:100.
Production of Shiga-like toxins by Escherichia coli O157:H7: Effects of other bacteria and analogues of quorum sensing molecules -
Tu, S., Uknalis, J., Paoli, G., He, Y., Gehring, A.G. 2009. Production of Shiga-like toxins by Escherichia coli O157:H7: Effects of other bacteria and analogues of quorum sensing molecules. Journal of Rapid Methods and Automation in Microbiology.17(4):420-437.
Capture of E. coli O157:H7 using immunomagnetic beads of different size and antibody conjugating chemistry -
Tu, S., Reed, S.A., Gehring, A.G., He, Y., Paoli, G. 2009. Capture of E. coli O157:H7 using immunomagnetic beads of different size and antibody conjugating chemistry. Sensors. 9:717-730.
Detection of Salmonella Enteriditis from Egg Components Using Different Immunomagnetic Beads and Time-resolved Fluorescence -
Tu, S., Reed, S.A., Gehring, A.G., He, Y. 2008. Detection of Salmonella Enteriditis from Egg Components Using Different Immunomagnetic Beads and Time-resolved Fluorescence. Journal of Food Analytical Methods. Available:http://www.springerlink.com/content/68381p3740355j10/
Detection of Salmonella Enteriditis from egg components using different immunomagnetic beads and time–resolved fluorescence -
Tu, S., Reed, S.A., He, Y., Gehring, A.G. 2008. Detection of Salmonella Enteriditis from egg components using different immunomagnetic beads and time–resolved fluorescence. [Abstract]p.2-42.
Analysis of AI-2/LuxS dependent transcriptional profiling in Campylobacter jejuni 81-176 -
He, Y., Frye, J.G., Strobaugh Jr, T.P., Chen, C. 2008. Ai-2/luxs dependent transcriptional profiling in campylobacter jejuni 81-176. Foodborne Pathogens and Disease. 5(4):399-415.
Application of horse-radish peroxidase linked chemiluminescence to determine the production mechanism of Shiga-like toxins by E. coli O157:H7 -
Tu, S., Uknalis, J., Gehring, A.G., He, Y. 2007. Application of horse-radish peroxidase linked chemiluminescence to determine the production mechanism of Shiga-like toxins by E. coli O157:H7. Proceedings of SPIE.#6761
Application of horse-radish peroxidase linked chemiluminescence to determine the production mechanism of Shiga-like toxins by E. coli O157:H7 -
Tu, S., Uknalis, J., Gehring, A.G., He, Y. 2007. Application of horse-radish peroxidase linked chemiluminescence to determine the production mechanism of Shiga-like toxins by E. coli O157:H7. Proceedings of SPIE.6761:67610C-1-67610C-9.
Microarray Analysis of Quorum-Sensing Regulated Gene Expression in Campylobacter jejuni -
He, Y., Frye, J.G., Chen, C. 2007. Microarray Analysis of Quorum-Sensing Regulated Gene Expression in Campylobacter jejuni. Meeting Abstract.
Comparison of methods for detecting live, stressed, and dead cells of Campylobacter jejuni -
Chen, C., He, Y. 2007. Comparison of methods for detecting live, stressed, and dead cells of Campylobacter jejuni. Abstract. International Association for Food Protection. P3-50.
Detection of live/dead Campylobacter jejuni cells by real-time PCR -
Chen, C., He, Y. 2006. Detection of live/dead Campylobacter jejuni cells by real-time PCR. Abstract. p.3-1.
AI-2 Quorum Sensing in Campylobacter jejuni -
He, Y., Chen, C. 2006. Ai-2 quorum sensing in campylobacter jejuni. Meeting Abstract.