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United States Department of Agriculture

Agricultural Research Service

Related Topics

Melanie J Filiatrault
Emerging Pests and Pathogens Research
General Biological Science

Phone: (607) 255-7876
Fax: (607) 255-4471
Room 413

USDA,REE,ARS,NEA
USDA-ARS, ROBERT W. HOLLEY CENTER, TOWER ROAD
ITHACA , NY 148532901

Projects
Unraveling the Phytopathogen's Response to its Environment
General Cooperative Agreement (A)
  Accession Number: 429835
PSEUDOMONAS SYSTEMS BIOLOGY
Appropriated (D)
  Accession Number: 423000

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Disruption of the carA gene in pseudomonas syringae results in reduced fitness and alters motility -
Butcher, B.G., D'Amico, K.M., Stoos, K., Filiatrault, M.J. 2016. Disruption of the carA gene in Pseudomonas syringae alters motility and results in reduced fitness. BMC Microbiology. 16:194.
Dissecting the regulon of the two-component system CvsSR: Identifying new virulence genes in Pseudomonas syringae pv. tomato DC3000 -
Fishman, M., Stodghill, P., Filiatrault, M.J. 2016. Dissecting the regulon of the two-component system CvsSR: Identifying new virulence genes in Pseudomonas syringae pv. tomato DC3000. International Congress on Molecular Plant-Microbe Interactions. P6-141. p. 43.
Virulence of Pseudomonas syringae pv. tomato DC3000 is modulated through the Catabolite Repression Control protein Crc -
Chakravarthy, S., Butcher, B., Damico, K., Liu, Y., Filiatrault, M.J. 2016. Virulence of Pseudomonas syringae pv. tomato DC3000 is modulated through the Catabolite Repression Control protein Crc. International Congress on Molecular Plant-Microbe Interactions. P7-160. p. 44.
Probing Pseudomonas syringae host interactions using metatranscriptomics -
Filiatrault, M.J., Fishman, M., Stodghill, P. 2016. Probing Pseudomonas syringae host interactions using metatranscriptomics. American Phytopathological Society Annual Meeting. p. 44.
Interactions among rsmX ncRNAs and Rsm RNA-binding proteins in the plant pathogen Pseudomonas syringae DC3000 -
Rouse, C., Fishman, M., Filiatrault, M.J. 2016. Interactions among rsmX ncRNAs and Rsm RNA-binding proteins in the plant pathogen Pseudomonas syringae DC3000. American Society for Biochemistry and Molecular Biology Annual Meeting. Online: C31 1054.1.
The involvement of catabolite repression in the virulence of Pseudomonas syringae -
Filiatrault, M.J., Butcher, B., D'Amico, K.M., Chakravarthy, S., Fishman, M., Stodghill, P. 2015. The involvement of catabolite repression in the virulence of Pseudomonas syringae. ASM Conference. p. 44.
Identification of a previously uncharacterized global regulator in Pseudomonas syringae pv. tomato DC3000 -
Fishman, M.R., Zhang, J., Bronstein, P.A., Stodghill, P., Filiatrault, M.J. 2015. Identification of a previously uncharacterized global regulator in Pseudomonas syringae pv. tomato DC3000. American Phytopathology Society. 705-P.
Characterizing the regulon of the two-component system, PSPTO_3380 and PSPTO_3381 -
Fishman, M.R., D'Amico, K.M., Stodghill, P., Filiatrault, M.J. 2015. Characterizing the regulon of the two-component system, PSPTO_3380 and PSPTO_3381. International Conference on Pseudomonas syringae Pathovars. p. 99.
PSPTO_3380 and PSPTO_3381: A two-component system that influences the virulence of Pseudomonas syringae pv. tomato DC3000 -
Fishman, M.R., Zhang, J., Bronstein, P.A., Filiatrault, M.J. 2014. PSPTO_3380 and PSPTO_3381: A two-component system that influences the virulence of Pseudomonas syringae pv. tomato DC300. International Congress on Molecular Plant-Microbe Interactions. p. 48.
Analysis of the small RNA spf in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000 -
Park, S., Bao, Z., Butcher, B., D'Amico, K.M., Xu, Y., Stodghill, P., Schneider, D.J., Cartinhour, S.W., Filiatrault, M.J. 2014. Analysis of the small RNA spf in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000. Microbiology. 160(Pt 5):941-953.
Analysis of the small RNA P16/RgsA in the plant pathogen Pseudomonas syringae pathovar tomato strain DC3000 -
Park, S., Butcher, B., Anderson, Z.U., Pellegrini, N., Bao, Z., D'Amico, K.M., Filiatrault, M.J. 2013. Analysis of the small RNA P16/RgsA in the plant pathogen Pseudomonas syringae pathovar tomato strain DC3000. Microbiology. 159:296-306.
CrcZ and CrcX regulate carbon utilization in Pseudomonas syringae pathovar tomato strain DC3000 -
Filiatrault, M.J., Stodghill, P., Wilson, J.M., Butcher, B.G., Chen, H., Meyers, C.R., Cartinhour, S.W. 2013. CrcZ and CrcX regulate carbon utilization in Pseudomonas syringae pathovar tomato strain DC3000. RNA Biology. 10(2):243-253.
Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000 -
Filiatrault, M.J., Stodghill, P., Myers, C.R., Bronstein, P.A., Butcher, B.G., Lam, H., Grills, G., Schweitzer, P., Wang, W., Schneider, D.J., Cartinhour, S.W. 2011. Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000. PLoS One. 6(12). Available: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029335.
Progress in prokaryotic transcriptomics -
Filiatrault, M.J. 2011. Progress in prokaryotic transcriptomics. Current Opinion in Microbiology. 14(5):579-586.
The small RNA transcriptome of Pseudomonas syringae pathovar tomato DC3000 -
Filiatrault, M.J., Moll, S., Bao, Z., Maciak, C.L., Chen, H., Myers, C.R., Stodghill, P., Cartinhour, S.W. 2011. The small RNA transcriptome of Pseudomonas syringae pathovar tomato DC3000. International Conference on Pseudomonas syringae Pathovars. 13:20.
Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000 -
Butcher, B.G., Bronstein, P., Myers, C., Stodghill, P., Bolton, J.J., Markel, E.J., Filiatrault, M.J., Swingle, B.M., Gaballa, A., Helmann, J.D., Schneider, D.J., Cartinhour, S.W. 2011. Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000. Journal of Bacteriology. 193(18):4598-4611. Available: http://www.ncbi.nlm.nih.gov/pubmed/21784947.
Construction of an rsmX co-variance model and identification of five rsmX-like ncRNAs in Pseudomonas syringae pv. tomato DC3000 -
Moll, S., Schneider, D.J., Stodghill, P., Myers, C.R., Cartinhour, S.W., Filiatrault, M.J. 2010. Construction of an rsmX co-variance model and identification of five rsmX-like ncRNAs in Pseudomonas syringae pv. tomato DC3000. RNA Biology. 7(5):1-10.
Analyzing the transcriptome of Pseudomonas syringae using high-throughput sequencing methodologies -
Filiatrault, M.J., Bronstein, P., Stodghill, P., Moll, S., Schneider, D.J., Cartinhour, S.W. 2010. Analyzing the transcriptome of Pseudomonas syringae using high-throughput sequencing methodologies. Meeting Abstract. p. 31.
Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity -
Filiatrault, M.J., Stodghill, P., Bronstein, P., Moll, S., Lindeberg, M., Grills, G., Schweitzer, P., Wang, W., Schroth, G., Luo, S., Khrebtukova, I., Thannhauser, T.W., Yang, Y., Butcher, B.G., Cartinhour, S.W., Schneider, D.J. 2010. Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity. Journal of Bacteriology. 192(9):2359-2372.
Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs -
Oliver, H.F., Orsi, R.H., Ponnala, L., Keich, U., Wang, W., Sun, Q., Cartinhour, S.W., Filiatrault, M.J., Wiedmann, M., Boor, K.J. 2009. Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs. Biomed Central (BMC) Genomics. 10:641.
Integrating molecular and computational methods to evaluate the Pseudomonas syringae transcriptome I & II -
Filiatrault, M.J., Stodghill, P. 2009. Integrating molecular and computational methods to evaluate the Pseudomonas syringae transcriptome I & II. American Phytopathological Society Abstracts.
High-throughput identification of transcriptional start sites in Pseudomonas syringae -
Filiatrault, M.J., Stodghill, P., Wang, W., Schweitzer, P., Grills, G., Cartinhour, S.W., Schneider, D.J. 2009. High-throughput identification of transcriptional start sites in Pseudomonas syringae. American Society for Microbiology. p. 251.
Investigating the role of two iron-regulated small RNAs of Pseudomonas syringae -
Bronstein, P., Filiatrault, M.J., Stodghill, P., Schneider, D.J., Cartinhour, S.W. 2009. Investigating the role of two iron-regulated small RNAs of Pseudomonas syringae. American Society for Microbiology. p. 20.
Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro -
Bronstein, P., Filiatrault, M.J., Myers, C., Rutzke, M., Schneider, D.J., Cartinhour, S.W. 2008. Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro. BMC Microbiology. 8:209.
Characterization of two small RNAs of Pseudomonas syringae DC3000 -
Filiatrault, M.J., Bronstein, P., Stodghill, P., Cartinhour, S.W. 2008. Characterization of two small RNAs of Pseudomonas syringae DC3000. American Society for Microbiology Meeting.
Identification and Characterization of iron-responsive regulatory elements in Pseudomonas syringae pv tomato DC3000 -
Bronstein, P., Filiatrault, M.J., Cartinhour, S.W. 2008. Identification and Characterization of iron-responsive regulatory elements in Pseudomonas syringae pv tomato DC3000. American Society for Microbiology Meeting.
Shotgun Sequencing of the Pseudomonas syringae DC3000 Transcriptome -
Filiatrault, M.J., Bronstein, P., Stodghill, P., Declerck, G.A., Schneider, D.J., Cartinhour, S.W. 2007. Shotgun Sequencing of the Pseudomonas syringae DC3000 Transcriptome. American Society for Microbiology Conference. p. 20.
Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro -
Bronstein, P., Filiatrault, M.J., Kim, B., Moll, M., Rutzke, M., Shuler, M., Schneider, D.J., Cartinhour, S.W. 2007. Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro. American Society for Microbiology. p. 20.
Pseudomonas aeruginosa Virulence and Pathogenesis Issues -
Wagner, V.E., Filiatrault, M.J., Picardo, K.F., Iglewski, B.H. 2008. Pseudomonas aeruginosa Virulence and Pathogenesis Issues. Book Chapter. p. 129-158.
Last Modified: 5/2/2016
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