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United States Department of Agriculture

Agricultural Research Service

Related Topics

Melanie J Filiatrault
Emerging Pests and Pathogens Research
General Biological Science

Phone: (607) 255-7876
Fax: (607) 255-4471
Room 413

USDA,REE,ARS,NEA
USDA-ARS, ROBERT W. HOLLEY CENTER, TOWER ROAD
ITHACA , NY 148532901
Projects
Unraveling the Phytopathogen's Response to its Environment
Cooperative Agreement (A)
  Accession Number: 429835
Genomic and Functional Analysis of Emerging and Persistent Plant Pathogenic Bacteria to Support Disease Control
Cooperative Agreement (A)
  Accession Number: 433486
Characterization of Molecular Networks in Diseases Caused by Emerging and Persistent Bacterial Plant Pathogens
In-House Appropriated (D)
  Accession Number: 432528
Roles of Auxin During Pseudomonas Syringae Pathogenesis
Reimbursable Cooperative Agreement (R)
  Accession Number: 432736

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Identification of the CvsSR regulon in Pseudomonas syringae reveals overlap with the Type-III secretion and AlgU regulons -
Fishman, M., Stodghill, P., Filiatrault, M.J. 2017. Identification of the CvsSR regulon in Pseudomonas syringae reveals overlap with the Type-III secretion and AlgU regulons. International Conference on Pseudomonas. P5.
Insights into the mechanisms of Promysalin, a secondary metabolite with genus-specific antibacterial activity against Pseudomonas -
Giglio, K.M., Keohane, C.E., Steele, A.D., Wuest, W.M., Filiatrault, M.J. 2017. Insights into the mechanisms of Promysalin, a secondary metabolite with genus-specific antibacterial activity against Pseudomonas. International Conference on Pseudomonas. P57.
The ECF sigma factor, PSPTO_1043, in Pseudomonas syringae pv. tomato DC3000 is induced by oxidative stress and regulates genes involved in oxidative stress response Reprint Icon -
Butcher, B., Bao, Z., Wilson, J., Stodghill, P., Swingle, B.M., Filiatrault, M.J., Schneider, D.J., Cartinhour, S.W. 2017. The ECF sigma factor, PSPTO_1043, in Pseudomonas syringae pv. tomato DC3000 is induced by oxidative stress and regulates genes involved in oxidative stress response. PLoS One. DOI: 10.1371/journal.pone.0180340.
Virulence of Pseudomonas syringae pv. tomato DC3000 is influenced by the catabolite repression control protein Crc -
Chakravarthy, S., Butcher, B., Liu, Y., D'Amico, K.M., Coster, M., Filiatrault, M.J. 2017. Virulence of Pseudomonas syringae pv. tomato DC3000 is influenced by the catabolite repression control protein Crc. Molecular Plant Pathology. 30(4):283-294.
The conserved hypothetical protein PSPTO_3957 is essential for virulence in the plant pathogen Pseudomonas syringae pv. tomato DC3000 -
D'Amico, K., Filiatrault, M.J. 2017. The conserved hypothetical protein PSPTO_3957 is essential for virulence in the plant pathogen Pseudomonas syringae pv. tomato DC3000. FEMS Microbiology Letters. 364(8):fnx004 DOI: https://doi.gor/10.1093/femsle/fnx004.
Disruption of the carA gene in pseudomonas syringae results in reduced fitness and alters motility -
Butcher, B.G., D'Amico, K.M., Stoos, K., Filiatrault, M.J. 2016. Disruption of the carA gene in Pseudomonas syringae alters motility and results in reduced fitness. BMC Microbiology. 16:194.
Dissecting the regulon of the two-component system CvsSR: Identifying new virulence genes in Pseudomonas syringae pv. tomato DC3000 -
Fishman, M., Stodghill, P., Filiatrault, M.J. 2016. Dissecting the regulon of the two-component system CvsSR: Identifying new virulence genes in Pseudomonas syringae pv. tomato DC3000. International Congress on Molecular Plant-Microbe Interactions. P6-141. p. 43.
Virulence of Pseudomonas syringae pv. tomato DC3000 is modulated through the Catabolite Repression Control protein Crc -
Chakravarthy, S., Butcher, B., Damico, K., Liu, Y., Filiatrault, M.J. 2016. Virulence of Pseudomonas syringae pv. tomato DC3000 is modulated through the Catabolite Repression Control protein Crc. International Congress on Molecular Plant-Microbe Interactions. P7-160. p. 44.
Probing Pseudomonas syringae host interactions using metatranscriptomics -
Filiatrault, M.J., Fishman, M., Stodghill, P. 2016. Probing Pseudomonas syringae host interactions using metatranscriptomics. American Phytopathological Society Annual Meeting. p. 44.
Interactions among rsmX ncRNAs and Rsm RNA-binding proteins in the plant pathogen Pseudomonas syringae DC3000 -
Rouse, C., Fishman, M., Filiatrault, M.J. 2016. Interactions among rsmX ncRNAs and Rsm RNA-binding proteins in the plant pathogen Pseudomonas syringae DC3000. American Society for Biochemistry and Molecular Biology Annual Meeting. Online: C31 1054.1.
The involvement of catabolite repression in the virulence of Pseudomonas syringae -
Filiatrault, M.J., Butcher, B., D'Amico, K.M., Chakravarthy, S., Fishman, M., Stodghill, P. 2015. The involvement of catabolite repression in the virulence of Pseudomonas syringae. ASM Conference. p. 44.
Identification of a previously uncharacterized global regulator in Pseudomonas syringae pv. tomato DC3000 -
Fishman, M.R., Zhang, J., Bronstein, P.A., Stodghill, P., Filiatrault, M.J. 2015. Identification of a previously uncharacterized global regulator in Pseudomonas syringae pv. tomato DC3000. American Phytopathology Society. 705-P.
Characterizing the regulon of the two-component system, PSPTO_3380 and PSPTO_3381 -
Fishman, M.R., D'Amico, K.M., Stodghill, P., Filiatrault, M.J. 2015. Characterizing the regulon of the two-component system, PSPTO_3380 and PSPTO_3381. International Conference on Pseudomonas syringae Pathovars. p. 99.
PSPTO_3380 and PSPTO_3381: A two-component system that influences the virulence of Pseudomonas syringae pv. tomato DC3000 -
Fishman, M.R., Zhang, J., Bronstein, P.A., Filiatrault, M.J. 2014. PSPTO_3380 and PSPTO_3381: A two-component system that influences the virulence of Pseudomonas syringae pv. tomato DC300. International Congress on Molecular Plant-Microbe Interactions. p. 48.
Analysis of the small RNA spf in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000 -
Park, S., Bao, Z., Butcher, B., D'Amico, K.M., Xu, Y., Stodghill, P., Schneider, D.J., Cartinhour, S.W., Filiatrault, M.J. 2014. Analysis of the small RNA spf in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000. Microbiology. 160(Pt 5):941-953.
Analysis of the small RNA P16/RgsA in the plant pathogen Pseudomonas syringae pathovar tomato strain DC3000 -
Park, S., Butcher, B., Anderson, Z.U., Pellegrini, N., Bao, Z., D'Amico, K.M., Filiatrault, M.J. 2013. Analysis of the small RNA P16/RgsA in the plant pathogen Pseudomonas syringae pathovar tomato strain DC3000. Microbiology. 159:296-306.
CrcZ and CrcX regulate carbon utilization in Pseudomonas syringae pathovar tomato strain DC3000 -
Filiatrault, M.J., Stodghill, P., Wilson, J.M., Butcher, B.G., Chen, H., Meyers, C.R., Cartinhour, S.W. 2013. CrcZ and CrcX regulate carbon utilization in Pseudomonas syringae pathovar tomato strain DC3000. RNA Biology. 10(2):243-253.
Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000 -
Filiatrault, M.J., Stodghill, P., Myers, C.R., Bronstein, P.A., Butcher, B.G., Lam, H., Grills, G., Schweitzer, P., Wang, W., Schneider, D.J., Cartinhour, S.W. 2011. Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000. PLoS One. 6(12). Available: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0029335.
Progress in prokaryotic transcriptomics -
Filiatrault, M.J. 2011. Progress in prokaryotic transcriptomics. Current Opinion in Microbiology. 14(5):579-586.
The small RNA transcriptome of Pseudomonas syringae pathovar tomato DC3000 -
Filiatrault, M.J., Moll, S., Bao, Z., Maciak, C.L., Chen, H., Myers, C.R., Stodghill, P., Cartinhour, S.W. 2011. The small RNA transcriptome of Pseudomonas syringae pathovar tomato DC3000. International Conference on Pseudomonas syringae Pathovars. 13:20.
Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000 -
Butcher, B.G., Bronstein, P., Myers, C., Stodghill, P., Bolton, J.J., Markel, E.J., Filiatrault, M.J., Swingle, B.M., Gaballa, A., Helmann, J.D., Schneider, D.J., Cartinhour, S.W. 2011. Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000. Journal of Bacteriology. 193(18):4598-4611. Available: http://www.ncbi.nlm.nih.gov/pubmed/21784947.
Construction of an rsmX co-variance model and identification of five rsmX-like ncRNAs in Pseudomonas syringae pv. tomato DC3000 -
Moll, S., Schneider, D.J., Stodghill, P., Myers, C.R., Cartinhour, S.W., Filiatrault, M.J. 2010. Construction of an rsmX co-variance model and identification of five rsmX-like ncRNAs in Pseudomonas syringae pv. tomato DC3000. RNA Biology. 7(5):1-10.
Analyzing the transcriptome of Pseudomonas syringae using high-throughput sequencing methodologies -
Filiatrault, M.J., Bronstein, P., Stodghill, P., Moll, S., Schneider, D.J., Cartinhour, S.W. 2010. Analyzing the transcriptome of Pseudomonas syringae using high-throughput sequencing methodologies. Meeting Abstract. p. 31.
Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity -
Filiatrault, M.J., Stodghill, P., Bronstein, P., Moll, S., Lindeberg, M., Grills, G., Schweitzer, P., Wang, W., Schroth, G., Luo, S., Khrebtukova, I., Thannhauser, T.W., Yang, Y., Butcher, B.G., Cartinhour, S.W., Schneider, D.J. 2010. Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity. Journal of Bacteriology. 192(9):2359-2372.
Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs -
Oliver, H.F., Orsi, R.H., Ponnala, L., Keich, U., Wang, W., Sun, Q., Cartinhour, S.W., Filiatrault, M.J., Wiedmann, M., Boor, K.J. 2009. Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs. Biomed Central (BMC) Genomics. 10:641.
Integrating molecular and computational methods to evaluate the Pseudomonas syringae transcriptome I & II -
Filiatrault, M.J., Stodghill, P. 2009. Integrating molecular and computational methods to evaluate the Pseudomonas syringae transcriptome I & II. American Phytopathological Society Abstracts.
High-throughput identification of transcriptional start sites in Pseudomonas syringae -
Filiatrault, M.J., Stodghill, P., Wang, W., Schweitzer, P., Grills, G., Cartinhour, S.W., Schneider, D.J. 2009. High-throughput identification of transcriptional start sites in Pseudomonas syringae. American Society for Microbiology. p. 251.
Investigating the role of two iron-regulated small RNAs of Pseudomonas syringae -
Bronstein, P., Filiatrault, M.J., Stodghill, P., Schneider, D.J., Cartinhour, S.W. 2009. Investigating the role of two iron-regulated small RNAs of Pseudomonas syringae. American Society for Microbiology. p. 20.
Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro -
Bronstein, P., Filiatrault, M.J., Myers, C., Rutzke, M., Schneider, D.J., Cartinhour, S.W. 2008. Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro. BMC Microbiology. 8:209.
Characterization of two small RNAs of Pseudomonas syringae DC3000 -
Filiatrault, M.J., Bronstein, P., Stodghill, P., Cartinhour, S.W. 2008. Characterization of two small RNAs of Pseudomonas syringae DC3000. American Society for Microbiology Meeting.
Identification and Characterization of iron-responsive regulatory elements in Pseudomonas syringae pv tomato DC3000 -
Bronstein, P., Filiatrault, M.J., Cartinhour, S.W. 2008. Identification and Characterization of iron-responsive regulatory elements in Pseudomonas syringae pv tomato DC3000. American Society for Microbiology Meeting.
Shotgun Sequencing of the Pseudomonas syringae DC3000 Transcriptome -
Filiatrault, M.J., Bronstein, P., Stodghill, P., Declerck, G.A., Schneider, D.J., Cartinhour, S.W. 2007. Shotgun Sequencing of the Pseudomonas syringae DC3000 Transcriptome. American Society for Microbiology Conference. p. 20.
Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro -
Bronstein, P., Filiatrault, M.J., Kim, B., Moll, M., Rutzke, M., Shuler, M., Schneider, D.J., Cartinhour, S.W. 2007. Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro. American Society for Microbiology. p. 20.
Pseudomonas aeruginosa Virulence and Pathogenesis Issues -
Wagner, V.E., Filiatrault, M.J., Picardo, K.F., Iglewski, B.H. 2008. Pseudomonas aeruginosa Virulence and Pathogenesis Issues. Book Chapter. p. 129-158.
Last Modified: 10/17/2017
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