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ARS Home » Southeast Area » Stuttgart, Arkansas » Dale Bumpers National Rice Research Center » People & Locations » Shannon Pinson

Shannon R Pinson (PhD)
Dale Bumpers National Rice Research Center
Research Geneticist (Plants)

Phone: (870) 672-6106
Fax: (870) 673-7581

2890 HWY 130 EAST
STUTTGART, AR 72160
Projects
Gene Discovery and Crop Design for Current and New Rice Management Practices and Market Opportunities
In-House Appropriated (D)
  Accession Number: 434318
Improving the Quality of Rice by Identifying Targets to Restrict Arsenic Accumulation
Reimbursable Cooperative Agreement (R)
  Accession Number: 431678

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Increasing resistant starch in rice through genetics and breeding - (Abstract Only)
Pinson, S.R., Chen, M. 2020. Increasing resistant starch in rice through genetics and breeding. Agronomy Abstracts, paper number 126455. ASA-CSSA-SSSA Annual Meeting Abstracts, Virtual Meeting. November 8-11, 2020.
Genome-wide association mapping for grain manganese in rice (Oryza sativa L.) using a multi-experiment approach - (Peer Reviewed Journal)
Do we need micronutrient applications to the rice crop if we reduce water use? ()
Tarpley, L., Mohammad, A.R., Pinson, S.R., Ratna-Raj, R. 2020. Do we need micronutrient applications to the rice crop if we reduce water use?. Meeting Abstract. Texas Rice, special section, Highlighting Research in 2020. pp. 30-32. https://beaumont.tamu.edu/eLibrary/
Vis/NIR hyperspectral imaging distinguishes sub-population, production environment, and physicochemical properties in rice. Reprint Icon - (Peer Reviewed Journal)
Barnaby, J.Y., Huggins, T.D., Lee, H., McClung, A.M., Pinson, S.R., Oh, M., Bauchan, G.R., Tarpley, L., Lee, K., Kim, M.S., Edwards, J. 2020. Vis/NIR hyperspectral imaging distinguishes sub-population, production environment, and physicochemical properties in rice. Scientific Reports. https://doi.org/10.1038/s41598-020-65999-7.
Genomic prediction and bayesian network analysis of multiple root architecture traits in rice - (Abstract Only)
Sharma, S., Gealy, D.R., Pinson, S.R., Edwards, J. 2020. Genomic prediction and bayesian network analysis of multiple root architecture traits in rice. Poster presentation. Arkansas Bioinformatics Consortium, Little Rock, Arkansas. February 10-11, 2020.
Genetic loci and agronomic traits impacting grain-arsenic concentrations revealed by GWA and biparental QTL analyses - (Proceedings)
Pinson, S.R., Edwards, J., Jackson, A.K., Heuschele, D.J., Barnaby, J.Y., Tarpley, L., Green, C.E., Codling, E.E., Smith, A.P. 2020. Genetic loci and agronomic traits impacting grain-arsenic concentrations revealed by GWA and biparental QTL analyses. Rice Technical Working Group Meeting Proceedings. Orange Beach, Alabama. February 24-27, 2020. CDROM.
Differentiating sub-population, production environment and grain chalk by hyperspectral imaging - (Proceedings)
Barnaby, J.Y., Huggins, T.D., Lee, H., McClung, A.M., Pinson, S.R., Oh, M., Bauchan, G.R., Tarpley, L., Lee, K., Kim, M.S., Edwards, J. 2020. Differentiating sub-population, production environment and grain chalk by hyperspectral imaging. Rice Technical Working Group Meeting Proceedings. Orange Beach, Alabama. February 24-27, 2020. CDROM.
Identification of GWA-QTLs and germplasm useful for enhancing sheath blight resistance - (Proceedings)
Identifying genomic regions influencing variations in inorganic arsenic accumulation in rice cultivars - (Abstract Only)
Fernandez-Baca, C.P., Codling, E.E., Reddy, V., Pinson, S.R., McClung, A.M., Barnaby, J.Y. 2019. Identifying genomic regions influencing variations in inorganic arsenic accumulation in rice cultivars. 36th Annual Mid Atlantic Plant and Molecular Biology Society. Poster #3.
Covariation among root biomass, shoot biomass, and tiller number in three rice populations Reprint Icon - (Peer Reviewed Journal)
Barnaby, J.Y., Pinson, S.R., Chun, J., Bui, L.T. 2019. Covariation among root biomass, shoot biomass, and tiller number in three rice populations. Crop Science. 59:1516-1530. https://doi.org/10.2135/cropsci2018.09.0595.
Natural variation in a molybdate transporter controls grain molybdenum concentration in rice Reprint Icon - (Peer Reviewed Journal)
Huang, X., Liu, H., Pinson, S.R., Lin, H., Guerinot, M., Zhao, F., Salt, D.E. 2019. Natural variation in a molybdate transporter controls grain molybdenum concentration in rice. New Phytologist. https://doi.org/10.1111/nph.15546.
Genes and physiological factors associated with natural variation in rice arsenic concentrations - (Abstract Only)
Pinson, S.R., Edwards, J., Heuschele, J.D., Tarpley, L., Green, C.E., Smith, A.P. 2018. Genes and physiological factors associated with natural variation in rice arsenic concentrations. Meeting Abstract. Available: http://ricecongress2018.irri.org/sites/default/files/Genes%20and%20Physiological%20Factors%20Associated%20With%20Natural%20Variation%20in%20Rice%20Arsenic%20Concentrations.pdf
Functional interactions of major rice blast resistance genes Pi-ta with Pi-b and minor blast resistance QTLs Reprint Icon - (Peer Reviewed Journal)
Chen, X., Jia, Y., Jia, M.H., Pinson, S.R., Wang, X., Wu, B. 2018. Functional interactions of major rice blast resistance genes Pi-ta with Pi-b and minor blast resistance QTLs. Phytopathology. https://doi.org/10.1094/PHYTO-02-18-0032-R.
Understanding the physiological and molecular mechanisms of rice-microbial interactions that produce methane - (Abstract Only)
Woojae, K., Liem, B., Chun, J., McClung, A.M., Adviento-Borbe, A.A., Rivers, A.R., Pinson, S.R., Maul, J.E., Reddy, V., Barnaby, J.Y. 2018. Understanding the physiological and molecular mechanisms of rice-microbial interactions that produce methane. 29th Annual Beltsville Poster Day Book, pg 33.
Novel QTLs affecting rice kernel fissure resistance discovered in the cultivar ‘Saber’ augment those from ‘Cybonnet’ Reprint Icon - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Jia, M.H., Gibbons, J.W. 2018. Novel QTLs affecting rice kernel fissure resistance discovered in the cultivar ‘Saber’ augment those from ‘Cybonnet’. Crop Science. https://doi.org:10.2135/cropsci2017.10.0593.
Genetic and physiological relationships between grain arsenic and resistance to straighthead - (Proceedings)
Pinson, S.R., Edwards, J., Hueschele, D.J., Tarpley, L., Isbell, C., Green, C.E., Smith, A.P. 2018. Genetic and physiological relationships between grain arsenic and resistance to straighthead. Rice Technical Working Group Meeting Proceedings. February 19-22, 2018, San Diego, California. Electronic Publication.
Relationships between shoot and root growth support indirect selection for increased root biomass - (Proceedings)
Pinson, S.R., Barnaby, J.Y., Bui, L.T., Chun, J. 2018. Relationships between shoot and root growth support indirect selection for increased root biomass. Rice Technical Working Group Meeting Proceedings. February 19-22, 2018, San Diego, California. Electronic Publication.
Dissection of genetic architecture of grain chalk using NIR spectroscopy - (Proceedings)
Barnaby, J.Y., Huggins, T.D., Lee, H., Oh, M., McClung, A.M., Pinson, S.R., Tarpley, L., Kim, M.S., Edwards, J. 2018. Dissection of genetic architecture of grain chalk using NIR spectroscopy. Rice Technical Working Group Meeting Proceedings. February 19-22, 2018, San Diego, California. Electronic Publication.
Root biomass as a major means of affecting methane emissions - (Proceedings)
Kim, W., Barnaby, J.Y., Liem, B., Chun, J., McClung, A.M., Adviento-Borbe, A.A., Pinson, S.R. 2018. Root biomass as a major means of affecting methane emissions. Rice Technical Working Group Meeting Proceedings. February 19-22, 2018, San Diego, California. Electronic Publication.
GENOME WIDE ASSOCIATION STUDY DISSECTING GENETIC ARCHITECTURE OF GRAIN PHYSICOCHEMICAL TRAITS IN RICE - (Abstract Only)
Barnaby, J.Y., Huggins, T.D., McClung, A.M., Pinson, S.R., Edwards, J., Tarpley, L., Kim, M.S., Lee, H., Oh, M. 2017. Genome wide association study dissecting genetic architecture of grain physicochemical traits in rice. 34th Annual Mid Atlantic Plant Molecular Biology Society Conference . p.15. Program Booklet. http://wp.towson.edu/mapmbs/files/2017/08/34th-MAPMBS-program-2017-26ysoam.pdf
Genetic, chemical, and field management strategies for reducing accumulation of arsenic in rice grains - (Abstract Only)
Pinson, S.R., Heuschele, D.J., Isbell, C., Smith, A.P. 2017. Genetic, chemical, and field management strategies for reducing accumulation of arsenic in rice grains. ASA-CSSA-SSSA Annual Meeting Abstracts.
Metabolic responses to arsenic in rice seedlings that differed in grain arsenite concentration Reprint Icon - (Peer Reviewed Journal)
Heuschele, D.J., Pinson, S.R., Smith, A.P. 2017. Metabolic responses to arsenic in rice seedlings that differed in grain arsenite concentration. Crop Science. https://doi.org:10.2135/cropsci2016.06.0493.
Phenotypic Evaluation of Weed-competitive Traits and Yield of Rice RILs from an Indica x Tropical Japonica Mapping Population - (Abstract Only)
Gealy, D.R., Pinson, S.R., Edwards, J. 2018. Phenotypic evaluation of weed-competitive traits and yield of rice RILs from an Indica x Tropical Japonica mapping population. Proceedings, 8th World Congress of Alleopathy, July 24-28, Marseille, France pg 39.
Evaluation of Genetic Variation in Rice to Mitigate Methane Emissions - (Abstract Only)
Barnaby, J.Y., McClung, A.M., Adviento-Borbe, A.A., Pinson, S.R.M., Kim, W., Jun, J., Kim, H. 2017. Evaluation of Genetic Variation in Rice to Mitigate Methane Emissions. Meeting Abstract. Joint Meeting of RDA and USDA, Jeollabuk-do, Republic of Korea, May 15-19, 2017. Pages 37-48.
Fine mapping and introgressing qFIS1-2, a major QTL for kernel fissure resistance in rice (Oryza sativa L.) - (Peer Reviewed Journal)
Sater, H.M., Pinson, S.R.M., Moldenhauer, K., Siebenmorgen, T.J., Mason, R.E., Boyett, V.A., Edwards, J. 2017. Fine mapping and introgressing qFIS1-2, a major QTL for kernel fissure resistance in rice (Oryza sativa L.). Crop Science. doi:10.2135/cropsci2016.09.08213.
Using rice genetic diversity for adaptions to and mitigation of changing environments - (Abstract Only)
Barnaby, J.Y., McClung, A.M., Adviento-Borbe, A.A., Pinson, S.R.M., Ziska, L.H. 2017. Using rice genetic diversity for adaptions to and mitigation of changing environments. Meeting Abstract. 2nd Agriculture and Climate Change Conference March 26-28, 2017, Melia Sitges, Spain. page 19.
Metabolic Differences Found In Seedlings of Rice Varieties That Produce Grains Low Versus High in Arsenic Concentration - (Abstract Only)
Pinson, S.R., Heuschele, D.J., Smith, A.P. 2016. Metabolic Differences Found In Seedlings of Rice Varieties That Produce Grains Low Versus High in Arsenic Concentration. ASA-CSSA-SSSA Annual Meeting Abstracts. Abstracts, paper number 100843.
Enhancing the health-beneficial qualities of whole grain rice - (Abstract Only)
Chen, M., Min, B., Bergman, C.J., Mcclung, A.M., Pinson, S.R., Boue, S.M. 2016. Enhancing the health-beneficial qualities of whole grain rice. AACC International. http://www.aaccnet.org/meetings/mtgpresentations/Pages/2016Abstracts.aspx?LID=282.
A heavy metal P-type ATPase OsHMA4 prevents copper accumulation in rice grain - (Peer Reviewed Journal)
Huang, X., Deng, F., Pinson, S.R., Guerinot, M., Salt, D.E., Ma, J. 2016. A heavy metal P-type ATPase OsHMA4 prevents copper accumulation in rice grain. Nature Communications. 7:121138. doi10.138/ncomms12138.
Identification of genes and physiological factors that reduce accumulation of arsenic in rice grain - (Proceedings)
Pinson, S.R.M., Heuschele, D.J., Salt, D.E., Smith, A., Tarpley, L. 2017. Identification of genes and physiological factors that reduce accumulation of arsenic in rice grain. Rice Technical Working Group Meeting Proceedings. p. 172. March 1-4, 2016. CDROM.
Rice fissure resistance QTLs from ‘Saber’ complement those from ‘Cypress’ - (Proceedings)
Pinson, S.R.M., Jia, Y., Gibbons, J. 2017. Rice fissure resistance QTLs from ‘Saber’ complement those from ‘Cypress’. Rice Technical Working Group Meeting Proceedings. , p. 171-172. March 1-4, 2016. CDROM.
Field evaluation of potential weed-suppressive traits in an indica x tropical japonica mapping population - (Proceedings)
Gealy, D.R., Pinson, S.R., Jia, Y., Zhang, F. 2017. Field evaluation of potential weed-suppressive traits in an indica x tropical japonica mapping population. 36th Rice Technical Working Group Meeting Proceedings, Galveston, TX. p. 106. March 1-4, 2016. CDROM.
Small Differences in Water Level Impacted Straighthead Ratings - (Proceedings)
Heuschele, D.J., Pinson, S.R. 2017. Small Differences in Water Level Impacted Straighthead Ratings. Rice Technical Working Group Meeting Proceedings. p. 97. March 1-4, 2016. CDROM.
Differences in how rice plants processes arsenic in their cells - (Proceedings)
Heuschele, D.J., Pinson, S.R.M., Smith, A. 2017. Differences in how rice plants processes arsenic in their cells. Rice Technical Working Group Meeting Proceedings. p. 173. March 1-4, 2016. CDROM.
Fine Mapping and Introgressing a Fissure Resistance Locus - (Proceedings)
Sater, H.M., Moldenhauer, K.K., Mason, R.E., Pinson, S.R., Siebenmorgen, T., Boyett, V.A. 2017. Fine Mapping and Introgressing a Fissure Resistance Locus. Rice Technical Working Group Meeting Proceedings. p. 170-171. March 2-4, 2016. CDROM.
QTLs for early tiller production and relationships with rapid seedling growth and increased panicle number in rice - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y. 2016. QTLs for early tiller production and relationships with rapid seedling growth and increased panicle number in rice. Crop Science. 56:505-519. doi: 10.2135/cropsci2014.09.0667.
Accumulation of arsenic in leaves and grain are affected by variety and soil arsenic - (Abstract Only)
Pinson, S.R., Heuschele, D.J., Smith, A.P. 2015. Accumulation of arsenic in leaves and grain are affected by variety and soil arsenic. ASA-CSSA-SSSA Annual Meeting Abstracts. Minneapolis, MN, Nov. 15-18, 2015. Paper number 937367.
Rice varietal differences in arsenite metabolism - (Abstract Only)
Heuschele, D.J., Pinson, S.R., Smith, A.P. 2015. Rice varietal differences in arsenite metabolism. ASA-CSSA-SSSA Annual Meeting Abstracts. Minneapolis, MN, Nov. 15-18, 2015. Poster number: 1108. Paper number: 93248. https://scisoc.confex.com/scisoc/2015am/webprogram/Paper93248.html.
Preserving rice quality: fine mapping and introgressing a fissure resistance locus - (Abstract Only)
Sater, H.M., Moldenhauer, K.K., Mason, R.E., Pinson, S.R., Siebenmorgen, T., Boyett, V.A. 2015. Preserving rice quality: fine mapping and introgressing a fissure resistance locus. ASA-CSSA-SSSA Annual Meeting Abstracts. Minneapolis, MN, Nov. 15-18, 2015. Paper number 94498.
Rice tissue accumulation of particular elements is dependent on the plant’s physiology ()
Tarpley, L., Chittoori, R., Pinson, S.R., Salt, D.E. 2015. Rice tissue accumulation of particular elements is dependent on the plant’s physiology. Texas Rice, Highlights in Research Special Edition 2015 [Meeting Abstract]. p. 8-9. Availiable: http://beaumont.tamu.edu/eLibrary/Newsletter/2015_Highlights_in_Research.pdf
Exploring sheath blight quantitative trait loci in a Lemont/O. meridionalis advanced backcross population - (Peer Reviewed Journal)
Eizenga, G.C., Jia, M.H., Pinson, S.R., Gasore, E.R., Prasad, B. 2015. Exploring sheath blight quantitative trait loci in a Lemont/O. meridionalis advanced backcross population. Molecular Breeding. 35(6):140. doi:10.1007/s11032-015-0332-3.
Growth characteristics of a weed-suppressive indica x non-suppressive tropical japonica rice mapping population - (Abstract Only)
Gealy, D.R., Jia, Y., Pinson, S.R. 2015. Growth characteristics of a weed-suppressive indica x non-suppressive tropical japonica rice mapping population. Weed Science Society of America Meeting Abstracts. 55(263). Available: http://wssaabstracts.com/public/30/proceedings.html
Registration of TIL:383.13, TIL:625 and TIL:634, three long grain tropical Japonica Rice (Oryza sativa L.) germplasm lines containing novel Indica Alleles that increase tiller production and grain yield ()
Pinson, S.R., Wang, Y., Tabien, R.E. 2016. Registration of TIL:383.13, TIL:625 and TIL:634, three long grain tropical Japonica Rice (Oryza sativa L.) germplasm lines containing novel Indica Alleles that increase tiller production and grain yield. Journal of Plant Registrations. 10:171-176.
Mapping and validation of quantitative trait loci associated with tiller production in rice (Oryza sativa L.) - (Peer Reviewed Journal)
Pinson, S.R., Wang, Y., Tabien, R.E. 2015. Mapping and validation of quantitative trait loci associated with tiller production in rice (Oryza sativa L.). Crop Science. 55:1-15. doi: 10.2135/cropsci2014.09.0644.
Identification of major genes affecting nutritional element concentrations in rice grains Reprint Icon - (Abstract Only)
Pinson, S.R.M., L. Tarpley, D.J. Heuschele, M.L. Guerinot, and D.E Salt. 2014. Identification of major genes affecting nutritional element concentrations in rice grains. Agronomy Abstracts, paper number 87946, Long Beach, CA, Nov. 2-6, 2014. https://scisoc.confex.com/scisoc/2014am/webprogram/Paper87946.html (oral presentation)
Rice Genotype Variation in Leaf-Grain Element Concentration Associations Reprint Icon - (Abstract Only)
Tarpley L., R. Chittoori, S.R.M. Pinson, M.L. Guerinot, and D.E. Salt. 2014. Rice genotype variation in leaf-grain element concentration associations. Agronomy Abstracts, paper number 88078, Long Beach, CA, Nov. 2-6, 2014. https://scisoc.confex.com/scisoc/2014am/webprogram/Paper88078.html. (oral presentation)
Health-promoting phytochemicals in rice: genotype screening for biofortification breeding - (Abstract Only)
Chen, M., Bergman, C.J., Fjellstrom, R.G., Pinson, S.R., Mcclung, A.M. 2014. Health-promoting phytochemicals in rice: genotype screening for biofortification breeding. Proc. ASA-CSSA-SSSA Annual Meeting Abstracts, San Diego, CA, Nov 2-5, 2104. p. x.
Rice lines with high leaf mineral nutrient levels ()
Tarpley, L., Chittoori, R., Pinson, S.R., Salt, D.E. 2014. Rice lines with high leaf mineral nutrient levels. Texas Experiment Station Field Day Handout. Texas Rice, Highlights in Research Special Edition:pg.9-10. http://beaumont.tamu.edu/eLibrary/Newsletter/2014_Highlights_in_Research.pdf
Rice lines with high leaf mineral nutrient levels ()
Tarpley, L., Chittoori, R., Pinson, S.R., Salt, D.E. 2014. Rice lines with high leaf mineral nutrient levels. Texas Experiment Station Field Day Handout. Texas Rice, Highlights in Research Special Edition:pg.9-10. http://beaumont.tamu.edu/eLibrary/Newsletter/2014_Highlights_in_Research.pdf
Worldwide genetic diversity for mineral element concentrations in rice grain Reprint Icon - (Peer Reviewed Journal)
Pinson, S.R., Tarpley, L., Yan, W., Yeater, K.M., Lahner, B., Yakubova, E., Huang, X., Zhang, M., Geurinot, M., Salt, D.E. 2015. World-wide genetic diversity for mineral element concentrations in rice grain. Crop Science. 55:1-18. doi:10.2135/cropsci2013.10.0656.
Exploring optimization of weed suppression, yield, and biotic stress tolerance in an allelopathic X non-allelopathic rice mapping population - (Abstract Only)
Gealy, D.R., Jia, Y., Pinson, S.R. 2014. Exploring optimization of weed suppression, yield, and biotic stress tolerance in an allelopathic X non-allelopathic rice mapping population. In: Proceedings of the 7th World Congress on Allelopathy. Vigo, Spain. International Allelopathy Society. International Allelopathy Congress. p. 224.
Identification of genetic loci underlying the kernel fissure-resistance exhibited by 'cypress' and 'saber' - (Proceedings)
1. Pinson, S.R.M., J. Gibbons, and Y. Jia. 2014. Identification of genetic loci underlying the kernel fissure-resistance exhibited by 'Cypress' and 'Saber'. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, pp. 58-59. Feb. 18-21, 2014. CDROM.
Identification of QTLs that enhance the nutritional value of rice grain and limit accumulation of undesirable elements such as arsenic - (Proceedings)
2. Pinson, S.R.M., L.Tarpley, W. Yan, G. Norton, M. Zhang, M.L. Guerinot, and D.E. Salt. 2014. Identification of QTLs that enhance the nutritional value of rice grain and limit accumulation of undesirable elements such as arsenic. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, pp. 57-58. Feb. 18-21, 2014. CDROM.
Rice grain element concentration predictions based on leaf concentrations: accelerating improvement of nutritional quality - (Proceedings)
3. Tarpley, L., R. Chittoori, S.R.M. Pinson, D.E. Salt, M.L. Guerinot, B. Lahner, M. Zhang, and J.T. Cothren. 2014. Rice grain element concentration predictions based on leaf concentrations: accelerating improvement of nutritional quality. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p. 51. Feb. 18-21, 2014. CDROM.
Early screening of recombinant inbred lines for fissure resistance in non-semidwarf rice - (Proceedings)
4. Sater, H.M., Moldenhauer, K.A., Pinson, S.R.M., and Boyett, V.A. 2014. Early Screening of Recombinant Inbred Lines for Fissure Resistance in Non-Semidwarf Rice. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p. 61. Feb. 18-21, 2014. CDROM.
Genome wide association mapping of grain arsenic, copper, molybdenum, and zinc in rice (Oryza sativa L.) grown at four international field sites Reprint Icon - (Peer Reviewed Journal)
Norton, G.J., Douglas, A., Lahner, B., Yakubova, E., Guerinot, M., Pinson, S.R., Tarpley, L., Eizenga, G.C., Mcgrath, S.P., Zhao, F., Islam, M., Islam, S., Duan, G., Zhu, Y., Salt, D.E., Meharg, A.A., Price, A.H. 2014. Genome wide association mapping of grain arsenic, copper, molybdenum, and zinc in rice (Oryza sativa L.) grown at four international field sites. PLoS One. 9(2):e89685.
Genetic and field management strategies to enhance the nutritional value of rice grains and limit accumulation of undesirable elements such as arsenic - (Abstract Only)
Pinson, S.R., Tarpley, L., Chittoori, R., Yan, W., Guerinot, M.L., Salt, D.E. 2013. Genetic and field management strategies to enhance the nutritional value of rice grains and limit accumulation of undesirable elements such as arsenic. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper number 78886, Tampa FL, Nov. 2-6, 2013.
Generalizations on the use of leaf element concentrations to accelerate improvement of rice grain nutritional quality - (Abstract Only)
Tarpley, L., Chittoori, R., Pinson, S.R., Salt, D.E., Guerinot, M.L., Cothren, T. 2013. Generalizations on the use of leaf element concentrations to accelerate improvement of rice grain nutritional quality. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper number 78835, Tampa, FL, Nov. 2-6, 2013.
Mapping and validation of quantitative trait loci associated with concentrations of 16 elements in unmilled rice grain - (Peer Reviewed Journal)
Zhang, M., Pinson, S.R., Tarpley, L., Huang, X., Lahner, B., Yakubova, E., Baxter, I.R., Guerinot, M., Salt, D.E. 2014. Mapping and validation of quantitative trait loci associated with concentrations of 16 elements in unmilled rice grain. Theoretical and Applied Genetics. 127(1):137-165.
Three QTLs conferring resistance to kernel fissuring in rice (Oryza sativa L.) identified by selective genotyping in two tropical japonica populations - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Gibbons, J. 2013. Three QTLs conferring resistance to kernel fissuring in rice (Oryza sativa L.) identified by selective genotyping in two tropical japonica populations. Crop Science. 53:2434-2443.
Patterns of element concentrations help explain varietal differences in rice seedling vigor Reprint Icon ()
Chittoori, R., Pinson, S.R., Salt, D.E., Tarpley, L. 2013. Patterns of element concentrations help explain varietal differences in rice seedling vigor. Texas Experiment Station Field Day Handout. Highlights in Research Special Ediction, pg. VII-VIII.
Genetic and field management strategies to for limiting accumulation of arsenic in rice grains - (Abstract Only)
Pinson, S.R., Tarpley, L., Yan, W., Salt, D.E. 2013. Genetic and field management strategies to for limiting accumulation of arsenic in rice grains [abstract]. American Chemical Society Abstracts, April 7-11, 2013, New Orleans, Louisiana. p.324.
Found: genes controlling the nutrient content of the rice grain Reprint Icon - (Abstract Only)
Pinson, S.R., Tarpley, L., Yeater, K.M., Yan, W., Guerinot, M., Salt, D.E. 2012. Found: genes controlling the nutrient content of the rice grain. ASA-CSSA-SSSA Annual Meeting Abstracts. Agronomy Abstracts Oct. 21-24, 2012 Cincinnati, OH. Paper number: 376-2.
Rice root physiological and morphological traits of diverse genotypes grown in different media Reprint Icon - (Abstract Only)
Chittoori, R., Pinson, S.R., Tarpley, L. 2012. Rice root physiological and morphological traits of diverse genotypes grown in different media. ASA-CSSA-SSSA Annual Meeting Abstracts. Agronomy Abstracts. Cincinatti, OH. Oct. 21-24, 2012 Paper number: 97-8.
Root physiological and morphological characteristics of 24 rice varieties selected for diverse grain mineral Reprint Icon - (Abstract Only)
Chittoori, R., Pinson, S.R., Tarpley, L. 2012. Root physiological and morphological characteristics of 24 rice varieties selected for diverse grain mineral. ASA-CSSA-SSSA Annual Meeting Abstracts. Agronomy Abstracts. Cincinnati, OH. Oct. 21 – 24, 2012 Poster number: 808.
Identification of Genes That Enhance the Nutritional Value of Rice ()
Pinson, S.R., Tarpley, L., Salt, D.E., Zhang, M., Guerinot, M. 2012. Identification of Genes That Enhance the Nutritional Value of Rice. Texas Rice, July 2012 edition, Special section, pp. VII-IX; http://beaumont.tamu.edu/eLibrary/Newsletter/2012_Highlights_in_Research.pdf Experiment Station Bulletin
Ensuring good rice plant nitrogen assimilation under difficult growing conditions ()
Ratnaprabha, Pinson, S.R., Salt, D.E., Tarpley, L. 2012. Ensuring good rice plant nitrogen assimilation under difficult growing conditions. Texas Rice, July 2012edition, Special section, pp.XI-XIII. http://beaumont.tamu.edu/elibrary/Newsletter/2012_Highlights_in_Research.pdf Experiment Station Bulletin
Associating rice root morphology and physiological traits with grain mineral concentrations of 24 varieties with extreme mineral compositions - (Proceedings)
Ratnaprabha, Pinson, S.R., Tarpley, L. 2012. Associating rice root morphology and physiological traits with grain mineral concentrations of 24 varieties with extreme mineral compositions. Botanical Society of America Proceedings. 1.
Identification and validation of QTLs associated with concentrations of mineral nutrients in unmilled grain of two mapping populations derived from 'Lemont' × 'TeQing' - (Proceedings)
Pinson, S.R., Min, Z., Tarpley, L., Lahner, B., Guerinot, M., Salt, D. 2012. Identification and validation of QTLs associated with concentrations of mineral nutrients in unmilled grain of two mapping populations derived from 'Lemont' × 'TeQing'. 35th Rice Technical Working Group Meeting Proceedings,Feb.27-March 1, 2012, Hot Springs, Arkansas. CDROM.
Genetic diversity for rice grain mineral concentrations observed among genetically and geographically giverse rice accessions - (Proceedings)
Pinson, S.R., Tarpley, L., Yeater, K.M., Yan, W., Guerinot, M., Salt, D. 2012. Genetic diversity for rice grain mineral concentrations observed among genetically and geographically giverse rice accessions. 35th Rice Technical Working Group Meeting Proceedings. Feb. 27-March 1, 2012, Hot Springs, Arkansas. CDROM.
Putative fissure-resistance QTLs mapped to chromosomes 1 and 8 based on allelic frequency differences observed between fissure-resistant and fissure-susceptible progeny from two segregating populations - (Proceedings)
Pinson, S.R., Gibbons, J., Jia, Y., Yeater, K.M. 2013. Putative fissure-resistance QTLs mapped to chromosomes 1 and 8 based on allelic frequency differences observed between fissure-resistant and fissure-susceptible progeny from two segregating populations. 35TH Rice Technical Working Group Meeting Proceedings, February 27, - March 1, 2012 Hot Springs, Arkansas. CDROM
Can rice grain mineral concentrations be predicted at seedling stage? - (Proceedings)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2012. Can rice grain mineral concentrations be predicted at seedling stage? 35TH Rice Technical Working Group Meeting Proceedings, February 27, - March 1, 2012, Hot Springs, Arkansas. CDROM
Associating root morphology and physiology with molybdenum uptake of three rice varieties grown in three pH regimes - (Proceedings)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2013. Associating root morphology and physiology with molybdenum uptake of three rice varieties grown in three pH regimes. 35th Rice Technical Working Group Meeting Proceedings. February 27- March 1, 2012, Hot Springs, Arkansas. CDROM
Got Rice? Enhancing Nutritional Qualities in Rice regimes - (Proceedings)
Hirschi, K., Morris, J., Pinson, S.R., Tarpley, L. 2013. Got Rice? Enhancing Nutritional Qualities in Rice Regimes. 35TH Rice Technical Working Group Meeting Proceedings, February 27-March 1, 2012, Hot Springs, Arkansas. CDROM
A digital photography and analysis system for estimation of root and shoot development in rice weed suppression studies in the field - (Abstract Only)
Gealy, D.R., Pinson, S.R. 2013. A digital photography and analysis system for estimation of root and shoot development in rice weed suppression studies in the field. 35th Rice Technical Working Group Meeting Proceedings. February 27, - March 1, 2012, Hot Springs, Arkansas. CDROM
Do rice varieties have differences in their plant mineral nutrition? ()
Ratnaprapha, Pinson, S.R., Tarpley, L. 2011. Do rice varieties have differences in their plant mineral nutrition?. Extension Reports. November 2011 edition, pg 3-7. Viewed http://beaumont.tamu.edu/eLibrary/Newsletter/2011_Winter_Issue.pdf
Response to early generation selection for resistance to rice kernel fissuring - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Gibbons, J. 2013. Response to early generation selection for resistance to rice kernel fissuring. Crop Science. 52:1482-1492.
Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa)in multiple sites - (Peer Reviewed Journal)
Norton, G.J., Pinson, S.R., Alexander, J., McKay, S., Hansen, H., Duan, G., Islam, M., Islam, S., Stroud, J.L., Zhao, F., McGrath, S.P., Zhu, Y., Lahner, B., Yakubova, E., Guerinot, M., Tarpley, L., Eizenga, G.C., Salt, D.E., Meharg, A.A., Price, A.H. 2012. Variation in grain arsenic assessed in a diverse panel of rice grown in multiple sites. New Phytologist. 193:650–664. doi: 10.1111/j.1469-8137.2011.03983.x.
Finding genes that enhance the nutritional value of rice ()
Pinson, S.R., Tarpley, L., Zhang, M., Lahner, B., Guerinot, M., Salt, D. 2011. Finding genes that enhance the nutritional value of rice. Extension Reports. October 2011 edition, pp. 3- 6. Available:http://beaumont.tamu.edu/eLibrary/Newsletter/2011_October_Newsletter.pdf
Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines - (Peer Reviewed Journal)
Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Wang, Y., Tabien, R.E., Li, Z. 2012. Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines. Journal of Plant Registrations. 6(1):128-135. doi: 10.3198/jpr2011.02.0066crmp.
Phenotypic gain from introgression of two QTLs, qSB9-2 and qSB12-1, for rice sheath blight resistance - (Peer Reviewed Journal)
Wang, Y., Pinson, S.R., Fjellstrom, R.G., Tabien, R.E. 2011. Phenotypic gain from introgression of two QTLs, qSB9-2 and qSB12-1, for rice sheath blight resistance. Molecular Breeding. 30:293-303.
Elemental-composition and plant-trait patterns in an ionomically and genetically diverse set of rice germplasm - (Abstract Only)
Pinson, S.R., Tarpley, L., Yeater, K.M., Yan, W., Guerinot, M., Salt, D.E. 2011. Elemental-composition and plant-trait patterns in an ionomically and genetically diverse set of rice germplasm [abstract]. In: Proceedings of American Society of Agronomy Meetings, October 16-17, 2011, San Antonio, TX. Available: http://a-c-s.confex.com/crops/2011am/webprogram/Paper66112.html.
Enhanced molybdenum uptake in rice - (Abstract Only)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2011. Enhanced molybdenum uptake in rice [abstract]. American Society of Agronomy Meetings, Oct. 16-17, 2011, San Antonio, TX. Available:http://a-c-s.confex.com/crops/2011am/webprogram/Paper66112.html
Can Seedling Ionomics Predict Rice Grain Ionomics? - (Abstract Only)
Ratnaprabha, R., Pinson, S.R., Tarpley, L. 2011. Can Seedling Ionomics Predict Rice Grain Ionomics? American Society of Agronomy Meetings. Paper 66150.
Comparative ionomes of rice leaves and seeds - (Abstract Only)
Ratnaprabha, Pinson, S.R., Salt, D.E., Tarpley, L. 2011. Comparative ionomes of rice leaves and seeds [abstract]. Botanical Society of America for Poster Presentation at Annual Conference, July 9-13, 2011, St. Louis Missouri. p. 695.
Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags ()
Pinson, S.R., Gibbons, J., Jia, Y. 2011. Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags. Texas Rice Special Section, Highlighting Research in 2011. p. II.
Applied genetics: Speeding the development of improved varieties by developing breeding tools and genetic knowledge ()
Pinson, S.R., Tabien, R., Tarpley, L. 2011. Applied genetics: Speeding the development of improved varieties by developing breeding tools and genetic knowledge. Texas Rice Special Section, Highlighting Research in 2011. p. I-II.
Can seedling mineral composition predict rice grain nutritional value? ()
Ratnaprabha, R., Pinson, S.R., Salt, D.E., Tarpley, L. 2011. Can seedling mineral composition predict rice grain nutritional value? Texas Rice Special Section, Highlighting Research in 2011. p. XIII-XIV.
Genetic Diversity for Concentration of Sixteen Mineral Elements Among Diverse Rice Germplasm - (Abstract Only)
Pinson, S.R., Tarpley, L., Baxter, I.R., Zhang, M., Guerinot, M., Punshon, T., Salt, D.E. 2010. Genetic Diversity for Concentration of Sixteen Mineral Elements Among Diverse Rice Germplasm. In: Proceedings of the American Society of Agronomy Meeting, Oct. 31 - Nov. 4, 2010, Long Beach, CA. 296-1.
Making rice even healthier! ()
Pinson, S.R., Tarpley, L. 2010. Making rice even healthier! Texas Rice Experiment Station Bulletins. X(8):1,6-8. Available: http://beaumont.tamu.edu/eLibrary/Newsletter/2010_October_Newsletter.pdf.
New method opens opportunity to proactively select for fissure resistance in early breeding generations ()
Pinson, S.R., Gibbons, J.R., Jia, Y. 2010. New method opens opportunity to proactively select for fissure resistance in early breeding generations. Texas Experiment Station Field Day Handout. VI-VII - http://beaumont.tamu.edu/eLibrary/Newsletter/2010_Highlights_in_Research.pdf..
Found: Rice that produces grains with improved nutritional value ()
Pinson, S.R., Tarpley, L., Ratnaprabha, Salt, D., Guerinot, M.L. 2010. Found: Rice that produces grains with improved nutritional value. Texas Experiment Station Field Day Handout. VII - VIII; http://beaumont.tamu.edu/eLibrary/Newsletter/2010_Highlights_in_Research.pdf.
Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1 - (Proceedings)
Pinson, S.R., Jia, Y., Gibbons, J. 2010. Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1. Rice Technical Working Group Meeting Proceedings. CDROM.
Genetic diversity for grain mineral concentrations among diverse rice germplasm grown gnder aerobic and anaerobic field conditions - (Proceedings)
Pinson, S.R., Tarpley, L., Salt, D.E., Zhang, M., Baxter, I., Guerinot, M.L., Punshon, T. 2010. Genetic diversity for grain mineral concentrations among diverse rice germplasm grown gnder aerobic and anaerobic field conditions. Rice Technical Working Group Meeting, Biloxi, MS, Feb. 22-25, 2010. CDROM.
Spatially resolved elemental mapping of two U.S. rice core collection grain accessions with diverse arsenic accumulation characteristics via synchrotron x-Ray fluorescence microscopy (SXRF) - (Proceedings)
Punshon, T., Guerinot, M.L., Lanzirotti, A., Pinson, S.R., Tarpley, L., Salt, D.E., Zhang, M., Baxter, I. 2010. Spatially resolved elemental mapping of two U.S. rice core collection grain accessions with diverse arsenic accumulation characteristics via synchrotron x-Ray fluorescence microscopy (SXRF). Rice Technical Working Group Meeting Proceedings, Biloxi, MS, Feb. 22-25, 2010. CDROM.
A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values - (Proceedings)
Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Yang, Y., Tabien, R.E., Li, Z. 2009. A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values. 6th International Rice Genetics Symposium on Nov. 16-18, 2009, Manilla, Philippines. P9-1 Page 215.
Bacterial panicle blight resistance QTL in rice (Oryza sativa L.) and their association with resistance to other diseases - (Peer Reviewed Journal)
Pinson, S.R., Shahjahan, A., Rush, M.C., Groth, D.E. 2010. Bacterial panicle blight resistance QTL in rice (Oryza sativa L.) and their association with resistance to other diseases. Crop Science. 50:1287-1297.
RiceCAP: Progress in identifying QTL for sheath blight resistance and milling yield - (Abstract Only)
Mcclung, A.M., Boza, E., Brooks, S.A., Correll, J., Eizenga, G.C., Fjellstrom, R.G., Groth, D.E., Jia, Y., Jodari, F., Linscombe, S.D., Liu, G., Moldenhauer, K.K., Nelson, J.C., Oard, J., Pinson, S.R., Prasad, B., Scheffler, B.E., Yeater, K.M., Wang, Y. 2009. RiceCAP: Progress in identifying QTL for sheath blight resistance and milling yield. American Society of Agronomy Abstracts.
Selection for fissure resistance now made possible in early breeding generations ()
Pinson, S.R., Gibbons, J., Jia, Y. 2009. Selection for fissure resistance now made possible in early breeding generations. Texas Rice, Highlighting Research in 2009. pp. VI-VII.
Applied Genetics: Developing breeding tools and knowledge ()
Pinson, S.R., Wang, Y. 2009. Applied Genetics: Developing breeding tools and knowledge. Texas Rice, Highlighting Research in 2009. pp. IX-X.
Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts - (Proceedings)
Pinson, S.R., Gibbons, J.W., Jia, Y. 2009. Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts. Rice Utilization Workshop Proceedings. http://www.usarice.com/doclib/124/3957.pdf.
Early generation selection for resistance to rice kernel fissuring proves effective - (Abstract Only)
Pinson, S.R., Gibbons, J.W., Jia, Y. 2008. Early generation selection for resistance to rice kernel fissuring proves effective. [abstract] American Society of Agronomy Abstracts. p. 552-8.
Spreading culm locus discovered while dissecting a sheath blight resistance QTL within a set of TeQing-into-Lemont introgression lines - (Abstract Only)
Wang, Y., Pinson, S.R., Fjellstrom, R.G., Sharma, A., Tabien, R.E. 2008. Spreading culm locus discovered while dissecting a sheath blight resistance QTL within a set of TeQing-into-Lemont introgression lines. American Society of Agronomy Abstracts paper number 552.8, Houston, TX Oct. 5-9, 2008. CDROM.
Genetic mapping of sheath blight resistance to QTLs within tropical Japonica rice cultivars - (Peer Reviewed Journal)
Sharma, A., McClung, A.M., Pinson, S.R., Kepiro, J.L., Shank, A.R., Tabien, R.E., Fjellstrom, R.G. 2009. Genetic mapping of sheath blight resistance to QTLs within tropical Japonica rice cultivars. Crop Science. 49:256-264.
Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles - (Peer Reviewed Journal)
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Jia, M.H., Jia, Y., Fjellstrom, R.G., Mackill, D., Li, Z. 2008. Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles. Journal of Plant Registrations. 2(3):251-254.
Waxy gene haplotypes: Associations with pasting properties in an international rice germplasm collection - (Peer Reviewed Journal)
Chen, M., Bergman, C.J., Pinson, S.R., Fjellstrom, R.G. 2008. Waxy gene haplotypes: Associations with pasting properties in an international rice germplasm collection. Journal of Cereal Science. 48:781-788.
Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation - (Proceedings)
Pinson, S.R., Wang, Y., Liu, G., Jia, M.H., Jia, Y., Sharma, A., Fjellstrom, R.G., Tabien, R.E. 2008. Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Using TeQing-into-Lemont introgression lines (TILs) to dissect sheath blight resistance QTLs and fine-map a spreading culm gene - (Proceedings)
Wang, Y., Pinson, S.R., Fjellstrom, R.G., Sharma, A., Brooks, S.A., Tabien, R.E. 2008. Using TeQing-into-Lemont introgression lines (TILs) to dissect sheath blight resistance QTLs and fine-map a spreading culm gene. Rice Technical Working Group Meeting Proceedings, San DIego, CA, Feb. 18-21, 2008. CDROM.
Is ALL Rice Bran Created Equal? - (Proceedings)
Bergman, C.J., Chen, M., Goffman, F.D., Pinson, S.R. 2007. Is ALL Rice Bran Created Equal?. Rice Utilization Workshop Proceedings, New Orleans, LA Feb. 1-2-2007. http://www.usarice.com/doclib/124/3838.pdf.
Resistance to rice grain fissuring: Improving breeding selection techniques and identifying physical, chemical, and genetic factors underlying fissure resistance - (Proceedings)
Pinson, S.R., Osborn, G.S., Thomas, A.E., Mcclung, A.M. 2007. Resistance to rice grain fissuring: Improving breeding selection techniques and identifying physical, chemical, and genetic factors underlying fissure resistance. United States Japan Natural Resources Protein Panel 36:227-231.
A new rice gene-mapping population containing indica chromosomal segments introgressed into a tropical japonica background - (Abstract Only)
Pinson, S.R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A. 2007. A new rice gene-mapping populatin containing indica chromosomal segments introgressed into a tropical japonica background. [abstract] American Society of Agronomy Abstracts. p.277-6.
A new micro-chamber method for selecting sheath blight tolerant rice ()
Pinson, S.R., Fjellstrom, R.G., Tabien, R.E., Mcclung, A.M., Wang, Y. 2007. A new micro-chamber method for selecting sheath blight tolerant rice. Experiment Station Bulletins. http://beaumont.tamu.edu/eLibrary/Newsletter/2007_Highlights_in_Research.pdf. pp.IX-XI.
Rice bran phytonutrients ()
Chen, M.H., Bergman, C.J., Pinson, S.R. 2007. Rice bran phytonutrients. Experiment Station Bulletins.
Waxy gene haplotypes: Associations with amylose content and the effect by the environment in an international rice germplasm collection - (Peer Reviewed Journal)
Chen, M., Bergman, C.J., Pinson, S.R., Fjellstrom, R.G. 2008. Waxy gene haplotypes: Associations with amylose content and the effect by the environment in an international rice germplasm collection. Journal of Cereal Science. 47:536-545.
Rapid Determination of Rice Cultivar Responses to the Sheath Blight Pathogen Rhizoctonia solani Using a Micro-Chamber Screening Method - (Peer Reviewed Journal)
Jia, Y., Coarrea-Victoria, F., McClung, A.M., Zhu, L., Liu, G., Wamishe, Y., Xie, J., Marchetti, M.A., Pinson, S.R., Rutger, J.N., Correll, J.C. 2006. Rapid determination of rice cultivar responses to the sheath blight pathogen Rhizoctonia solani using a micro-chamber screening method. Plant Disease. 91:485-489.
Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing - (Proceedings)
Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A., Li, Z., Pinson, S.R. 2007. Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing. Plant and Animal Genome Conference Proceedings.
New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations - (Proceedings)
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G. 2007. New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations. [abstract]. Plant and Animal Genome Conference XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.
PROTEOMIC AND GENETIC APPROACHES TO IDENTIFYING DEFENSE-RELATED PROTEINS IN RICE CHALLENGED WITH THE FUNGAL PATHOGEN RHIZOCTONIA SOLANI - (Peer Reviewed Journal)
Lee, J., Bricker, T.R., Lefevre, M., Pinson, S.R., Oard, J.H. 2006. Proteomic and genetic approaches to identifying defense-related proteins in rice challenged with the fungal pathogen Rhizoctonia solani. Molecular Plant Pathology 7(5):405-416.
SHEATH BLIGHT RESISTANCE IN SOUTHERN RICE ()
Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. Sheath blight resistance in Southern rice. Texas Rice. Highlighting Research in 2006. p. VIII.
Rice functionality, starch structure and the genes ()
Chen, M.H., Fjellstrom, R.G., Pinson, S.R., McClung, A.M., Bergman, C.J. 2006. Rice functionality, starch structure and the genes. http://beaumont.tamu.edu/eLibrary/Newsletter/2006_Highlights_in_Research.pdf.Texas Rice, Highlighting Research in 2006. p. XII.
INCORPORATING FOREIGN SHEATH BLIGHT RESISTANCE GENES INTO US RICE GEMPLASM ()
Pinson, S.R., Fjellstrom, R.G., Shank, A.R., Oard, J., Groth, D., Jia, Y., Jia, M.H. 2006. Incorporating foreign sheath blight resistance genes into us rice gemplasm. Texas Rice, Highlighting Research 2006. pp.VI-VII.
BRINGING QUANTITATIVE TRAITS UNDER BREEDER CONTROL BY COMBINING QTL MAPPING WITH CANDIDATE GENE APPROACHES: A CASE STUDY OF RICE SHEATH BLIGHT RESISTANCE - (Proceedings)
Pinson, S.R., Jia, Y., Fjellstrom, R.G., Jia, M.H., Hulbert, S., Liu, K., Nelson, J.C. 2006. Bringing quantitative traits under breeder control by combining QTL mapping with candidate gene approaches: A case study of rice sheath blight resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
COMPLEMENTARY PROTEOMIC AND GENETIC ANALYSES OF RICE RESPONSE TO CHALLENGE BY THE FUNGAL PATHOGEN RHIZOCTONIA SOLANI - (Proceedings)
Lee, J., Bricker, T.M., Lebevre, M., Pinson, S.R., Cooper, B., Oard, J.H. 2006. Complementary proteomic and genetic analyses of rice response to challenge by the fungal pathogen Rhizoctonia solani [abstract]. Plant and Animal Genome Conference Proceedings. p. P253.
MAPPING SHEATH BLIGHT RESISTANCE QTL(S) IN TROPICAL JAPONICA RICE - (Proceedings)
Sharma, A., Kepiro, J.L., Fjellstrom, R.G., Pinson, S.R., Shank, A.R., McClung, A.M., Tabien, R.E. 2006. Mapping sheath blight resistance QTL(s) in tropical japonica rice. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
COMPLEMENTARY PROTEOMIC AND GENETIC ANALYSES OF RICE RESPONSE TO RICE CHALLENGE BY THE FUNGAL PATHOGEN RHIZOCTONIA SOLANI - (Proceedings)
Lee, J., Bricker, T.M., Lefevre, M., Pinson, S.R., Cooper, B., Oard, J.H. 2006. Complementary proteomic and genetic analyses of rice response to rice challenge by the fungal pathogen Rhizoctonia solani. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
Genotype and environment effects on the tocotrienol, tocopherol, and gamma oryzanol fractions of an international rice germplasm collection - (Proceedings)
Bergman, C.J., Pinson, S.R., Chen, M.H. 2006. Genotype and environment effects on the tocotrienol, tocopherol, and gamma-oryzanol fractions of an international rice germplasm collection. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. pp. 117-118. 2006.
MAPPING SHEATH BLIGHT RESISTANCE QTLS IN RICE - (Proceedings)
Sharma, Arun, Kepiro, J.L., Fjellstrom, R.G., Pinson, S.R., Shank, A.R., McClung, A.M., Tabien, R. 2006. Mapping sheath blight resistance QTLs in rice [abstract]. Plant and Animal Genome Conference Proceedings. p. 162.
CORRELATION BETWEEN QTLS CONFERRING RESISTANCE TO FOUR DIFFERENT DISEASES WITH EACH OTHER AND WITH RGAS IDENTIFIES KEY REGIONS FOR FUTURE RESEARCH - (Proceedings)
Pinson, S.R., Hulbert, S., Liu, K., Nelson, J.C. 2005. Correlation between QTLs conferring resistance to four different diseases with each other and with RGAs identifies key regions for future research [abstract]. 5th International Rice Genetics Symposium, Manila, Philippines. p. 95.
PUTTING SHEATH BLIGHT RESISTANCE GENES TO WORK IN THE RICE FIELD ()
Pinson, S.R. 2005. Putting sheath blight resistance genes to work in the rice field. Texas Rice, Highlighting Research in 2005. pp. VIII-IX.
NITROGEN UTILIZATION EFFICIENCY: RELATIONSHIPS WITH GRAIN YIELD, GRAIN PROTEIN AND YIELD-RELATED TRAITS IN RICE - (Peer Reviewed Journal)
Samonte, S.B., Wilson, L.T., Medley, J., Pinson, S.R., McClung, A.M., Lales, J. 2006. Nitrogen utilization efficiency: relationships with grain yield, grain protein and yield-related traits in rice. Agronomy Journal 98:168-176.
Nitrogen utilization efficiency: Relationships with grain yield, grain protein, and yield-related traits in rice - (Peer Reviewed Journal)
Samonte, S.O., Wilson, L.T., Pinson, S.R., McClung, A.M., Lales, J.S. 2006. Nitrogen utilization efficiency: Relationships with grain yield, grain protein, and yield-related traits in rice. Agronomy Journal. 98:168-176.
EFFICIENT ANALYSIS OF MARKERS, GENES, AND QTLS USING A PERMANENT RICE GENE-MAPPING POPULATION - (Proceedings)
Pinson, S.R., Li, Z., Tabien, R.E., Tai, T.H., Redus, M., Fjellstrom, R.G. 2004. Efficient analysis of markers, genes,and QTLs using a permanent rice gene-mapping population. Plant and Animal Genome Conference XIII. p. 141
THE LEMONT/TEQING RIL RICE POPULATION PROVIDES UNIQUE OPPORTUNITY FOR CORRELATING MOLECULAR DATA WITH PHENOMICS - (Proceedings)
Pinson, S.R., Li, Z., Tabien, R.E., Tai, T., Redus, M.A., Fjellstrom, R.G. 2005. The Lemont/Teqing RIL rice population provides unique opportunity for correlating molecular data with phenomics. Proceedings, 2nd International Symposium, Rice Functional Genomics, Tucson, Arizona. p. 150.
CONFIRMING QTLS AND FINDING ADDITIONAL LOCI CONDITIONING SHEATH BLIGHT RESISTANCE IN RICE (ORYZA SATIVA L.) USING RECOMBINANT INBRED LINES - (Peer Reviewed Journal)
Pinson, S.R., Capdevielle, F.M., Oard, J.H. 2005. Confirming QTLs and finding additional loci conditioning sheath blight resistance in rice (Oryza sativa L.) using recombinant inbred lines. Crop Science. 45:503-510.
DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANT POPULATIONS FOR FUNCTIONAL GENOMICS OF HOST-PARASITE INTERACTIONS - (Abstract Only)
Jia, Y., Rutger, J.N., Wang, Z., Singh, P., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):47.
DEVELOPING RICE VARIETIES WITH IMPROVED FISSURE RESISTANCE: STEP 1. IDENTIFYING EFFECTIVE BREEDER SELECTION TECHNIQUES. ()
Pinson, S.R., 2004. Developing rice varieties with improved fissure resistance: Step 1. identifying effective breeder selection techniques. Texas Rice. p. 7-8.
IMPROVED METHODS FOR IDENTIFYING FISSURE RESISTANT RICE - (Proceedings)
Pinson, S.R., Osborn, G.S. 2004. Improved methods for identifying fissure resistant rice. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.
QTLS FOR PANICLE BLIGHT RESISTANCE AND THEIR ASSOCIATION WITH RESISTANCE TO OTHER DISEASES - (Proceedings)
Pinson, S.R., Shahjahan, A.M., Rush, M.C. 2004. QTLs for panicle blight resistance and their association with resistance to other diseases. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.
Progressing from putative QTLs to marker assisted selection in breeding - (Abstract Only)
McClung, A.M., Pinson, S.R., Shank, A.R., Chen, M., Bergman, C.J., Fjellstrom, R.G. 2003. Progressing from putative QTLs to marker assisted selection in breeding [abstract]. Agronomy Abstracts. 2003 CDROM.
TRACKING AND TAMING RICE GENES: HOW RESEARCH GENETICISTS ASSIST PLANT BREEDERS ()
PINSON, S.R. TRACKING AND TAMING RICE GENES: HOW RESEARCH GENETICISTS ASSIST PLANT BREEDERS. EXPERIMENT STATION BULLETINS. 2003. 3 pp.
USING A MOISTURE TRANSPORT MODEL FOR IDENTIFYING THE GENES EXPRESSING FIELD FISSURE RESISTANCE IN RICE SEED - (Proceedings)
WAGGONER, A.E., OSBORN, G.S., PINSON, S.R. USING A MOISTURE TRANSPORT MODEL FOR IDENITFYING THE GENES EXPRESSING FIELD FISSURE RESISTANCE IN RICE SEED. ASAE ANNUAL INTERNATIONAL MEETING. PAPER NO. 036193, 20 PP. 2003.
DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANT POPULATIONS FOR FUNCTIONAL GENOMICS OF HOST-PARASITE INTERACTIONS - (Abstract Only)
Jia, Y., Wang, Z., Singh, P., Rutger, J.N., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions [abstract]. 15th International Plant Protection Congress Proceedings. p. 64.
GENETIC DIVERSITY FOR LIPID CONTENT AND FATTY ACID PROFILE IN RICE BRAN - (Peer Reviewed Journal)
Goffman, F.D., Pinson, S.R., Bergman, C.J. 2003. Genetic diversity for lipid content and fatty acid profile in rice bran. Journal of Agricultural and Food Chemistry. 80(5):485-490.
LIPID CONTENT AND FATTY ACID PROFILE IN THE BRAN OF A RICE GERMPLASM COLLECTION - (Proceedings)
GOFFMAN, F.D., PINSON, S.R., BERGMAN, C.J. LIPID CONTENT AND FATTY ACID PROFILE IN THE BRAN OF A RICE GERMPLASM COLLECTION. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 53.
CONFIRMATION AND FURTHER MAPPING OF SHEATH BLIGHT RESISTANCE QTLS IN RICE USING INTERVAL ANAYLYIS, STEPWISE REGRESSION AND DISCRIMINANT ANALYSIS OF RIL DATA - (Proceedings)
PINSON,S.R., OARD,J.H., CAPDEVIELLE,F.M., MARCHETTI,M.A., CONFIRMATION AND FURTHER MAPPING OF SHEATH BLIGHT RESISTANCE QTLS IN RICE USING INTERVAL ANAYLYIS, STEPWISE REGRESSION AND DISCRIMINANT ANALYSIS OF RIL DATA, PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS, 2003. p. 158.
ENHANCING U.S. RICE CULTIVAR DEVELOPMENT WITH MOLECULAR MARKER TECHNOLOGY - (Proceedings)
MCCLUNG, A.M., FJELLSTROM, R.G., BORMANS, C.A., BERGMAN, C.J., PINSON, S.R., SHANK, A.R., PARK, W.D. ENHANCING U.S. RICE CULTIVAR DEVELOPMENT WITH MOLECULAR MARKER TECHNOLOGY. PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS. 2003. p. 55.
DATA MINING APPROACHES FOR IDENTIFICATION OF ELITE GENOTYPES IN GERMPLASM COLLECTIONS OF RICE USING MOLECULAR MARKER INFORMATION - (Proceedings)
SHEATH BLIGHT RESISTANCE QTLS IDENTIFIED BY INTERVAL ANALYSIS, STEPWISE REGRESSION AND DISCRIMINANT ANALYSIS - (Proceedings)
PINSON, S.R., OARD, J., CAPDEVIELLE, F. SHEATH BLIGHT RESISTANCE QTLS IDENTIFIED BY INTERVAL ANALYSIS, STEPWISE REGRESSION AND DISCRIMINANT ANALYSIS. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 46.
INHERITANCE OF AROMA: MARKERS HELP TO DISTINGUISH FACT FROM ARTIFACT - (Proceedings)
PINSON, S.R., FJELLSTROM, R.G., BERGMAN, C.J., GRIMM, C.C., CHAMPAGNE, E.T. INHERITANCE OF AROMA: MARKERS HELP TO DISTINGUISH FACT FROM ARTIFACT. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 54.
SEMIDWARF BREEDING LINES WITH IMPROVED SEEDLING VIGOR DUE TO INTROGRESSED GENES - (Proceedings)
PINSON, S.R. SEMIDWARF BREEDING LINES WITH IMPROVED SEEDLING VIGOR DUE TO INTROGRESSED GENES. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 62.
DETERMINING THE EFFECT OF MOISTURE DIFFUSIVITY ON FISSURE RESISTANCE OF FOUR RICE VARIETIES - (Proceedings)
THOMAS, A., PINSON, S.R., OSBORN, G.S. DETERMINING THE EFFECT OF MOISTURE DIFFUSIVITY ON FISSURE RESISTANCE OF FOUR RICE VARIETIES. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 119.
DEVELOMENT OF PCR-BASED MARKERS ASSOCIATED WITH COOKED RICE KERNEL ELONGATION AND AROMA - (Proceedings)
BERGMAN, C.J., MCCLUNG, A.M., PINSON, S.R., FJELLSTROM, R.G. DEVELOMENT OF PCR-BASED MARKERS ASSOCIATED WITH COOKED RICE KERNEL ELONGATION AND AROMA. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 53.
LIPID CONTENT AND FATTY ACID PROFILE IN THE BRAN OF A RICE GERMPLASM COLLECTION - (Proceedings)
MARKER-BASED CLASSIFICATION OF RECOMBINANT INBRED LINES OF RICE WITH DIFFERENTIAL RESPONSE TO SHEATH BLIGHT DISEASE - (Abstract Only)
DEVELOPMENT OF PCR BASED MARKERS ASSOCIATED WITH COOKED RICE KERNEL ELONGATION AND AROMA - (Proceedings)
BERGMAN, C.J., MCCLUNG, A.M., PINSON, S.R., FJELLSTROM, R.G. DEVELOPMENT OF PCR BASED MARKERS ASSOCIATED WITH COOKED RICE KERNEL ELONGATION AND AROMA. RICE TECHNICAL WORKING GROUP MEETING PROCEEDINGS. 2002. p. 53.
SEEDLING VIGOR QTLS IDENTIFIED IN TROPICAL SEMIDWARF RICE - (Proceedings)
RFLP MAPPING OF GENES FOR COMPLETE AND PARTIAL RESISTANCE TO BLAST DISEASE ()
SEEDLING VIGOR GENES FOUND IN SEMIDWARF TROPICAL RICE ()
QUANTITATIVE TRAIT LOCI AFFECTING KERNEL SIZE AND SHAPE IN RICE (ORYZA SATIVA L.) - (Peer Reviewed Journal)
MOLECULAR MAPPING OF SEEDLING VIGOR QTLS IN TROPICAL RICE - (Peer Reviewed Journal)
SEEDLING VIGOR QTLS IDENTIFIED IN TROPICAL SEMIDWARF RICE - (Abstract Only)
MAPPING QTLS FOR FIELD RESISTANCE IN RICE TO THE BLAST PATHOGEN AND EVALUATING THEIR INDIVIDUAL AND COMBINED UTILITY IN IMPROVED VARIETIES - (Peer Reviewed Journal)
COMBINING CROP MODELING WITH ECONOMIC RISK ANALYSIS TO EVALUATE OPTIMAL COMBINATIONS OF PHENOTYPIC TRAITS - (Proceedings)
COMBINING QTL MAPPING WITH COMPUTER MODELING OF YIELD COMPONENT TRAITS - (Proceedings)
MAPPING QTLS FOR SEEDLING VIGOR IN TROPICAL RICE USING RFLPS ()
SEELDING VIGOR QTLS MAPPED IN TROPICALLY ADAPTED SEMIDWARF RICE - (Proceedings)
MOLECULAR ANALYSIS TO IDENTIFY AND STUDY GENES AFFECTING MILLING QUALITY ()
QTLS AFFECTING MILLING QUALITY AMONG LEMONT/TEQING RILS - (Proceedings)
THE EXPRESSION OF HIGH IRON CONTENT IN RICE GRAINS OF TWO RICE VARIETIES FROM CHINA ()
RFLP MAPPING OF BLAST RESISTANCE GENES ()
RFLP MAPPING OF GENES AFFECTING RICE MILLING QUALITY - (Proceedings)
LOCATING NEW GENES FOR AROMA IN RICE THAT COULD ENHANCE THE AROMA OF DELLA AND JASMINE 85 RICE TYPES ()
CREATION OF A PERMANENT RICE MAPPING POPULATION TO ALLOW ECONOMICAL STUDY OF GENES RESPONSIBLE FOR NUMEROUS PLANT AND GRAIN CHARACTERS ()
RFLP MAPPING OF RICE BLAST RESISTANCE QTLS IN A RECOMBINANT INBRED LINE POPULATION DERIVED FROM LEMONT X TEQING - (Proceedings)
DNA MARKERS ASSOCIATED WITH MILLING QUALITY - (Proceedings)
RFLP FACILITATED ANALYSIS OF TILLER AND LEAF ANGLES IN RICE (ORYZA SATIVA L) - (Peer Reviewed Journal)
SEEDLING VIGOR QTLS MAPPED IN TROPICALLY ADAPTED SEMIDWARF RICE - (Proceedings)
GENETIC DISSECTION OF THE SOURCE-SINK RELATIONSHIP AFFECTING FECUNDITY AND YIELD IN RICE (ORYZA SATIVA L.) - (Peer Reviewed Journal)
MOLECULAR MAPPING OF MAJOR GENES FOR RICE BLAST RESISTANCE IN A WIDELY- COMPATIBLE INTER-SUBSPECIFIC RECOMBINANT INBRED RICE POPULATION - (Proceedings)
CHROMOSOMAL LOCATION AND TEMPORAL EXPRESSION OF QTLS FOR PARTIAL RESISTANCETO RICE BLAST DISEASE - (Peer Reviewed Journal)
IDENTIFYING OPTIMAL PHENOTYPIC TRAIT SETS USING PHYSIOLOGICALLY-BASED MODELING - (Proceedings)
GENETICS OF HYBRID STERILITY AND HYBRID BREAKDOWN IN CULTIVATED RICE (ORYZASATIVA L.) - (Peer Reviewed Journal)
T-DNA INTEGRATION INTO GENOMIC DNA OF RICE FOLLOWING AGROBACTERIUM INOCULA-TION OF ISOLATED SHOOT APICES - (Peer Reviewed Journal)
EPISTASIS IS AN IMPORTANT GENETIC BASIS FOR THREE GRAIN YEILD COMPONENTS INRICE (ORYZA SATIVA L.) - (Peer Reviewed Journal)
RFLP MAPPING OF GENES FOR GRAIN SIZE AND SHAPE - (Proceedings)
RFLP MAPPING OF GENES: POTENTIAL, LIMITS AND CURRENT STATUS - (Proceedings)
INHERITANCE OF MESOCOTYL LENGTH AND SEEDLING VIGOR IN A SEMI-DWARF MAPPING POPULATION - (Proceedings)
RFLP-FACILITATED GENETIC ANALYSIS OF SOURCE-LINK SIZE RELATED TRAITS IN RICE (ORYZA SATIVA L.) - (Proceedings)
INHERITANCE OF RICE BLAST RESISTANCE IN PROGENY OF THE CROSS 'A-301'/JASMINE 85 - (Proceedings)
GENETICS OF HYBRID STERILITY AND HYBRID BREAKDOWN IN CULTIVATED RICE - (Proceedings)
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