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ARS Home » Pacific West Area » Corvallis, Oregon » National Clonal Germplasm Repository » People & Locations » Jill Bushakra

Jill Bushakra
National Clonal Germplasm Repository
Biological Science Technician (Plants)

Phone: (541) 738-4219
Fax: (541) 738-4205

33447 PEORIA RD
CORVALLIS , OR 973332521

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Repository contributions to Rubus research -
Bushakra, J., Alice, L., Carter, K., Dossett, M., Liston, A., Meiers, R., Mulch, C., Peterson, M.E., Vining, K., Zurn, J.D., Finn, C.E., Bassil, N.V., Hummer, K.E. 2018. Repository contributions to Rubus research. North American Raspberry & Blackberry Association Meeting. North American Raspberry & Blackberry Association Meeting.
Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data -
Jibran, R., Dzierzon, H., Bassil, N.V., Bushakra, J., Edger, P.P., Sullivan, S., Finn, C.E., Dossett, M., Vining, K.J., Vanburen, R., Mockler, T.C., Liachko, I., Davies, K.M., Foster, T.M., Chagne, D. 2017. Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data. Horticulture Research. doi: 10.1038/s41438-017-0013-y.
Increased phylogenetic resolution using target enrichment in Rubus -
Carter, K., Alice, L., Bryant, D., Bushakra, J., Liston, A., Mockler, T., Bassil, N.V., Hummer, K.E. 2017. Increased phylogenetic resolution using target enrichment in Rubus. HortScience. Available: https://ashs.confex.com/ashs/2017/meetingapp.cgi/Paper/26717.
Toward understanding genotype x environment interactions on flowering and fruiting in black raspberry (Rubus occidentalis L.) -
Bushakra, J., Bradish, C., Weber, C., Scheerens, J.C., Robbins, L., Dossett, M., Peterson, M.E., Fernandez, G., Bassil, N.V., Finn, C.E. 2017. Toward understanding genotype x environment interactions on flowering and fruiting in black raspberry (Rubus occidentalis L.). Acta Horticulturae. 1117:25-30.
North American crop wild relatives of temperate berries (Fragaria L., Ribes L., Rubus L., and Vaccinium L.) -
Genotyping and phenotyping heat tolerance in black raspberry (Rubus occidentalis L.) -
Bradish, C.M., Fernandez, G.E., Dossett, M., Bushakra, J., Bassil, N.V., Finn, C.E. 2016. Genotyping and phenotyping heat tolerance in black raspberry (Rubus occidentalis L.). Acta Horticulturae. 1127:321-324. doi: 10.17660/ActaHortic.2016.1127.50.
Molecular characterization of aphid resistance in black raspberry germplasm -
Bushakra, J., Armes, K.A., Vining, K.J., Dossett, M., Lee, J.C., Bradish, C., Fernandez, G., Lee, J., Finn, C.E., Bassil, N.V. 2016. Molecular characterization of aphid resistance in black raspberry germplasm. Acta Horticulture Proceedings. American Society for Horticultural Science (ASHS), Atlanta, GA, August 2016.
The genome of black raspberry (Rubus occidentalis) -
Vanburen, R., Bryant, D., Bushakra, J., Vining, K.J., Edger, P.P., Rowley, E.R., Priest, H.D., Michael, T.P., Lyons, E., Filichkin, S., Dossett, M., Finn, C.E., Bassil, N.V., Mockler, T.C. 2016. The genome of black raspberry (Rubus occidentalis). Plant Journal. 87(6):535-547. doi: 10.1111/tpj.13215.
Evaluations of sustained vigor and winter hardiness of black raspberry (Rubus occidentalis) grown in the Southeastern U.S -
Bradish, C.M., Fernandez, G., Bushakra, J., Bassil, N.V., Finn, C.E., Dossett, M. 2016. Evaluations of sustained vigor and winter hardiness of black raspberry (Rubus occidentalis) grown in the Southeastern U.S. Acta Horticulturae. 1133:129-134.
Black raspberry fruit composition over two years from seedling populations grown at four U.S. geographic locations -
Perkins-Veazie, P., Ma, G., Fernandez, G., Bradish, C.M., Bushakra, J., Bassil, N.V., Weber, C.A., Scheerens, J.C. 2016. Black raspberry fruit composition over two years from seedling populations grown at four U.S. geographic locations. Acta Horticulturae. 1133:335-338.
The genome of black raspberry (Rubus occidentalis) -
Vanburen, R., Bryant, D.W., Bushakra, J., Vining, K.J., Edger, P.P., Rowley, E.R., Priest, H.D., Michael, T.P., Lyons, E., Filichkin, S.A., Dossett, M., Finn, C.E., Bassil, N.V., Mockler, T.C. 2016. The genome of black raspberry (Rubus occidentalis). Plant Journal. 87(6):535-547. doi: 10.1111/tpj.13215.
Developing expressed sequence tag libraries and the discovery of simple sequence repeat markers for two species of raspberry (Rubus L.) Reprint Icon -
Bushakra, J., Lewers, K.S., Staton, M.E., Zhebentyaeva, T., Saski, C.A. 2015. Developing expressed sequence tag libraries and the discovery of simple sequence repeat markers for two species of raspberry (Rubus L.). Biomed Central (BMC) Plant Biology. 15:258-269.
Comparative RNA-seq for the investigation of tolerance to Verticillium wilt in black raspberry -
Bushakra, J., Bassil, N.V., Weiland, G.E., Finn, C.E., Vining, K., Filichkin, S., Dossett, M., Bryant, D., Mockler, T. 2016. Comparative RNA-seq for the investigation of tolerance to Verticillium wilt in black raspberry. Acta Horticulture Proceedings. 1133:103-114. doi: 10.17660/ActaHortic.2016.1133.16.
Molecular evaluation of aphid-resistant black raspberry germplasm for improved durability in black and red raspberry -
Bushakra, J., Dossett, M., Lee, J.C., Lee, J., Bassil, N.V., Finn, C.E. 2015. Molecular evaluation of aphid-resistant black raspberry germplasm for improved durability in black and red raspberry [abstract]. American Society of Horticulture Science Meeting. 2015 American Society for Horticultural Science Annual Conference.
Black raspberry genomic and genetic resource development to enable cultivar improvement -
Bushakra, J., Bassil, N.V., Bryan, D., Mockler, T., Dossett, M., Gilmore, B.S., Peterson, M.E., Bradish, C., Fernandex, G., Lee, J., Finn, C.E. 2015. Black raspberry genomic and genetic resource development to enable cultivar improvement[abstract]. Plant and Animal Genome XXIII Conference.
A genetic linkage map of black raspberry (Rubus occidentalis) and the mapping of Ag4 conferring resistance to the aphid Amphorophora agathonica Reprint Icon -
Bushakra, J., Bryant, D.W., Dossett, M., Vining, K.J., Vanburen, R., Gilmore, B.S., Lee, J., Mockler, T.C., Finn, C.E., Bassil, N.V. 2015. A genetic linkage map of black raspberry (Rubus occidentalis) and the mapping of Ag4 conferring resistance to the aphid Amphorophora agathonica. Theoretical and Applied Genetics. 128:1631-1646.
Identification of QTL associated with flower and runner production in octoploid strawberry (Fragaria × ananassa) Reprint Icon -
Sooriyapathirana, S., Mookerjee, S., Weebadde, C.K., Finn, C.E., Lewers, K.S., Bushakra, J., Luby, J.J., Stewart, P., Neils, S., Hancock, J.F. 2015. Identification of QTL associated with flower and runner production in octoploid strawberry (Fragaria × ananassa). Journal of Berry Research. 5:107-116. doi: 10.3233/JBR-150095.
Developing black raspberry genetic and genomic resources -
Bushakra, J., Bryant, D., Dossett, M., Vining, K., Vanburen, R., Gilmore, B.S., Filichkin, S., Weiland, G.E., Peterson, M.E., Bradish, C.M., Fernandez, G., Lewers, K.S., Graham, J., Lee, J., Mockler, T., Bassil, N.V., Finn, C.E. 2015. Developing black raspberry genetic and genomic resources [abstract]. International Rubus and Ribes Symposium.
Development and transferability of black and red raspberry microsatellite markers from short-read sequences -
Dossett, M., Bushakra, J., Gilmore, B.S., Koch, C., Kemplar, C., Finn, C.E., Bassil, N.V. 2015. Development and transferability of black and red raspberry microsatellite markers from short-read sequences. Journal of the American Society for Horticultural Science. 140(3):243–252.
Toward understanding genotype x environment interactions in black raspberry (Rubus occidentalis L.) -
Bushakra, J., Bradish, C., Weber, C.A., Dossett, M., Fernandez, G., Weiland, G.E., Peterson, M.E., Scheerens, J.C., Robbins, L., Serce, S., Finn, C.E., Bassil, N.V. 2016. Toward understanding genotype x environment interactions in black raspberry (Rubus occidentalis L.). Acta Horticulturae. 1117:25-30. doi: 10.17660/ActaHortic.2016.1117.5.
Genetic mapping of day-neutrality in cultivated strawberry Reprint Icon -
Castro, P., Lewers, K.S., Weebadde, C., Wang, D., Hancock, J., Stewart, P., Bushakra, J., Finn, C.E., Luby, J. 2015. Genetic mapping of day-neutrality in cultivated strawberry. Molecular Breeding. 35(2):79-94.
Sambucus genetic resources at the U.S.D.A. National Clonal Germplasm Repository, Corvallis, Oregon -
Bushakra, J., Bassil, N.V., Finn, C.E., Hummer, K.E. 2015. Sambucus genetic resources at the USDA. National Clonal Germplasm Repository, Corvallis, Oregon. Acta Horticulture Proceedings. 1061:135-14.
Building the genomic infrastructure in black raspberry -
Bryant, D., Bushakra, J., Dossett, M., Vining, K., Filichkin, S., Weiland, G.E., Lee, J., Finn, C.E., Bassil, N.V., Mockler, T. 2014. Building the genomic infrastructure in black raspberry [abstract]. American Society for Horticultural Science Annual Conference.
Toward understanding genotype x environment interactions in black raspberry (Rubus occidentalis L.) -
Bushakra, J., Bradish, C.M., Weber, C.A., Scheerens, J., Dossett, M., Peterson, M.E., Fernandez, G., Lee, J., Bassil, N.V., Finn, C.E. 2014. Toward understanding genotype x environment interactions in black raspberry (Rubus occidentalis L.) [abstract]. American Society for Horticultural Science Annual Conference.
Black raspberry genetic and genomic resources development -
Bushakra, J., Bryant, D., Dossett, M., Gilmore, B.S., Filichkin, S., Weiland, G.E., Peterson, M.E., Bradish, C.M., Fernandez, G., Lewers, K.S., Graham, J., Lee, J., Mockler, T., Bassil, N.V., Finn, C.E. 2014. Black raspberry genetic and genomic resources development [abstract]. Annual Scientific Meeting of the American Society of Plant Biologists.
Sambucus genetic resources at the U.S. National Clonal Germplasm Repository [Abstract] -
Bushakra, J., Bassil, N.V., Finn, C.E., Hummer, K.E. 2013. Sambucus genetic resources at the U.S. National Clonal Germplasm Repository [Abstract]. Symposium Proceedings. 1061:135-145.
Developing a genotyping by sequencing protocol for linkage map construction in black raspberry -