Dewayne Deng
(PhD)
Genetics and Sustainable Agriculture Research
Biologist (Computational/Bioinformatics)
Phone: (662) 320-7514
Fax:
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Publications
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Registration of upland cotton RILs MS-4857 and MS-4878 with resistance to root-knot nematode and reniform nematode
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Wubben, M., Mccarty Jr, J.C., Hayes, R.W., Callahan, F.E., Deng, D.D., Jenkins, J.N. 2024. Registration of upland cotton RILs MS-4857 and MS-4878 with resistance to root-knot nematode and reniform nematode. Journal of Plant Registrations. 2024;1-5. https://doi.org/10.1002/plr2.20379.
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Co-existing anammox, ammonium-oxidizing, and nitrite-oxidizing bacteria in biocathode-biofilms enable energy-efficient nitrogen removal in bioelectrochemical desalination process
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Ghimire, U., Gude, V.G., Brooks, J.P., Smith, R.K., Deng, D.D. 2021. Co-existing anammox, ammonium-oxidizing, and nitrite-oxidizing bacteria in biocathode-biofilms enable energy-efficient nitrogen removal in bioelectrochemical desalination process. Chemical Engineering Journal. 9(14):4967-4979. https://doi.org/10.1021/acssuschemeng.0c07883.
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A novel variant of Gh_D02G0276 is required for Root-Knot nematode resistance on chromosome 14 in Upland Cotton
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Wubben, M., Thyssen, G.N., Callahan, F.E., Fang, D.D., Deng, D.D., Mccarty Jr, J.C., Li, P., Islam, M.S., Jenkins, J.N. 2019. A novel variant of Gh_D02G0276 is required for Root-Knot nematode resistance on chromosome 14 in Upland Cotton. Theoretical and Applied Genetics. 2019)132:1425–1434. https://doi.org/10.1007/s00122-019-03289-1.
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Genetic diversity of day-neutral converted landrace, Gossypium hirsutum L., accessions
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McCarty Jr, J.C., Deng, D.D., Jenkins, J.N., Geng, L. 2018. Genetic diversity of day-neutral converted landrace, Gossypium hirsutum L., accessions. Euphytica. 214:173. https://doi.org/10.1007/s10681-018-2264-6.
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Introgression of Gossypium barbadense L. into Upland cotton germplasm RMBUP-C4S1
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Jenkins, J.N., McCarty Jr, J.C., Deng, D.D., Geng, L., Hayes, R.W., Jones, D.C., Mammadova, R. 2018. Introgression of Gossypium barbadense L. into Upland cotton germplasm RMBUP-C4S1. Euphytica. 214:118. https://doi.org/10.1007/s10681-018-2200-9.
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Recent developments in fiber genomics of tetraploid cotton species
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Ayubov, M.S., Abdurakhmonov, I.Y., Sripathi, V.R., Saha, S., Norov, T.M., Buriev, Z.T., Shermatov, S.E., Ubaydullaeva, K.A., Mccarty Jr, J.C., Deng, D.D., Jenkins, J.N. 2017. Recent developments in fiber genomics of tetraploid cotton species. Cotton. 6:123-152. 10.5772/intechopen.72922.
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Individual and combined contributions of the Renbarb1, Renbarb2, and Renbarb3 quantitative trait loci to reniform nematode (Rotylenchulus reniformis Linford & Oliveira) resistance in Upland Cotton (Gossypium hirsutum L.)
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Wubben, M., McCarty Jr, J.C., Jenkins, J.N., Callahan, F.E., Deng, D.D. 2017. Individual and combined contributions of the Renbarb1, Renbarb2, and Renbarb3 quantitative trait loci to reniform nematode (Rotylenchulus reniformis Linford & Oliveira) resistance in Upland Cotton (Gossypium hirsutum L.). Euphytica. 213:1-9.
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Registration of six germplasm lines of cotton, Gosspyium hirsutum L. with resistance to root-knot and reniform nematodes
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Mccarty Jr, J.C., Jenkins, J.N., Wubben, M., Hayes, R.W., Callahan, F.E., Deng, D.D. 2017. Registration of six germplasm lines of cotton, Gosspyium hirsutum L. with resistance to root-knot and reniform nematodes. Journal of Plant Registrations. 11:168-171.
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A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton
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Islam, M.S., Thyssen, G.N., Jenkins, J.N., Zeng, L., Delhom, C.D., McCarty, J.C., Deng, D.D., Hinchliffe, D.J., Jones, D.C., Fang, D.D. 2016. A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton. BMC Genomics. 17:903. https://doi.org/10.1186/s12864-016-3249-2.
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Coupling of MIC-3 overexpression with the chromosome 11 and 14 root-knot nematode (RKN) (Meloidogyne incognita) resistance QTLs provides insights into the regulation of the RKN resistance response in Upland cotton...
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Wubben, M., Callahan, F.E., Jenkins, J.N., Deng, D.D. 2016. Coupling of MIC-3 overexpression with the chromosome 11 and 14 root-knot nematode (RKN) (Meloidogyne incognita) resistance QTLs provides insights into the regulation of the RKN resistance response in Upland cotton.... Theoretical and Applied Genetics. 129:1759-1767.
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Effects of low-grade weirs on soil microbial communities to advance agricultural best management practices for nitrate remediation
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Molecular confirmation of Gossypium hirsutum chromosome substitution lines
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Saha, S., Stelly, D.M., Makamov, A.K., Ayubov, M., Raska, D., Gutierrez, O.A., Manchali, S., Jenkins, J.N., Deng, D.D., Abdurakhmonov, I.Y. 2016. Molecular confirmation of Gossypium hirsutum chromosome substitution lines. Genetica. 144(3):289-306.
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Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.)
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Fang, D.D., Jenkins, J.N., Deng, D.D., McCarty Jr, J.C., Li, P., Wu, J. 2014. Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.). Biomed Central (BMC) Genomics. 15:397.
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A microsatellite-based genome-wide analysis of genetic diversity and linkage disequilibrium in Upland cotton (Gossypium hirsutum L.) cultivars from major cotton-growing countries
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Fang, D.D., Hinze, L.L., Percy, R.G., Li, P., Deng, D.D., Thyssen, G.N. 2013. A microsatellite-based genome-wide analysis of genetic diversity and linkage disequilibrium in Upland cotton (Gossypium hirsutum L.) cultivars from major cotton-growing countries. Euphytica. 191:391-401.
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Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode
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McCarty Jr., J.C., Jenkins, J.N., Wubben, M., Gutierrez, O.A., Hayes, R.W., Callahan, F.E., Deng, D.D. 2013. Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode. Journal of Plant Registrations. 7:220-223.
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Association of SSR markers with important fiber traits in Upland cotton
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Saha, S., Emgamberdiev, S.S., Wu, J., Jenkins, J.N., McCarty Jr, J.C., Deng, D.D., Abdurakhmonov, I. 2012. Association of SSR markers with important fiber traits in Upland cotton [abstract]. National Cotton Council Beltwide Cotton Conference. p. 754.
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SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.)
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Jenkins, J.N., McCarty Jr., J.C., Wubben, M.J., Hayes, R.W., Gutierrez, O.A., Callahan, F.E., Deng, D.D. 2012. SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.). Euphytica. 183:49-54.
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