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United States Department of Agriculture

Agricultural Research Service

About the database

DGIL Porcine Translational Research Database

PINdb

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This database contains functional information on genes commonly studied in humans, pigs, and rodents, including more than 2,300 sequenced at DGIL. Each entry has been manually-annotated and is linked to other porcine databases as well as Homologene, InnateDb and Gene Ontology Annotations.

Current Statistics (03/15/2014)

Gene entries

6,096

Full-length RNA transcripts (full 5’ and 3’)

3,285

Genes

3,078

% of genome

14.3%

Splice variants

207

Full-length protein sequences

4,227

% of genome

19.5%

Error notations (# of entries)

1,938

Artifactually duplicated genes

451

Missing genes (Ensembl 10.2)

450

Real-time PCR Assays

2,191

Taqman

1,855

SYBR Green

339

Antibodies (# entries)

532

 

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Disclaimer

This database is currently in a beta version, there are some incomplete annotations. We cannot guarantee the performance of the antibodies or PCR assays that have not been tested in our lab under conditions not specified in the published literature.

Updated

03/15/2014


Last Modified: 3/21/2014
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