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ARS Home » Plains Area » Kerrville, Texas » Knipling-Bushland U.S. Livestock Insects Research Laboratory » LAPRU » Research » Publications at this Location » Publication #348685

Research Project: Genomics of Livestock Pests

Location: Livestock Arthropod Pests Research

Title: Haematobia irritans dataset of raw sequence reads from Illumina and Pac Bio sequencing of genomic DNA

Author
item Bendele, Kylie
item Guerrero, Felicito - Felix

Submitted to: National Center for Biotechnology Information (NCBI)
Publication Type: Other
Publication Acceptance Date: 11/1/2017
Publication Date: 1/1/2018
Citation: Bendele, K.G., Guerrero, F. 2018. Haematobia irritans dataset of raw sequence reads from Illumina and Pac Bio sequencing of genomic DNA.. National Center for Biotechnology Information (NCBI). GenBank Accession Sequence Submission PRJNA30967, SAMN07830356.

Interpretive Summary: The genome of the horn fly was sequenced using Illumina- and Pac Bio-based technology. This dataset of raw sequence reads has been submitted to the National Center for Biotechnology Information (NCBI; http://www.ncbi.nlm.nih.gov) under the BioProject and BioSample accession numbers PRJNA30967 and SAMN07830356, respectively. The Illumina reads are under Short Read Archive (SRA) accession number SRR6231656, while the Pac Bio reads are under SRA accession number SRR6231657. USDA is an equal opportunity employer.

Technical Abstract: The genome of the horn fly, Haematobia irritans, was sequenced using Illumina- and Pac Bio-based protocols. Following quality filtering, the raw reads have been deposited at NCBI under the BioProject and BioSample accession numbers PRJNA30967 and SAMN07830356, respectively. The Illumina reads are under Short Read Archive (SRA) accession number SRR6231656, while the Pac Bio reads are under SRA accession number SRR6231657. USDA is an equal opportunity employer.