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ARS Home » Northeast Area » Geneva, New York » Grape Genetics Research Unit (GGRU) » Research » Research Project #440860

Research Project: Explainable Deep Learning-Based Image Analysis with Blackbird RGB Imaging Robot for Laboratory High Throughput Phenotyping

Location: Grape Genetics Research Unit (GGRU)

Project Number: 8060-21220-007-022-S
Project Type: Non-Assistance Cooperative Agreement

Start Date: Sep 15, 2021
End Date: Sep 14, 2022

Objective:
Laboratory computer vision is being used to quantify visible traits from images. ARS and Cornell have amassed expertise in high throughput phenotyping for grapevine powdery mildew severity via automation and machine learning data analysis. The goal of this project is to adapt current machine learning data analysis methods to other traits and containerize these for distribution via ARS high performance computers. This will empower additional ARS scientists for user-friendly and effective high-throughput lab phenotyping.

Approach:
a) Provide two imaging robots to collaborating ARS laboratories for testing new crops and/or traits. b) Guide those labs through imaging and data analysis. c) With the SCINet team, design an optimal solution for data uploading, curation, and management. d) Develop training materials to facilitate widespread deployment of Blackbird in ARS and university labs as a uniform phenotyping platform.