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United States Department of Agriculture

Agricultural Research Service

Related Topics

Research Project: New and Emerging Viral and Bacterial Diseases of Ornamental Plants: Detection, Identification, and Characterization

Location: Floral and Nursery Plants Research Unit

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Occurrence of Apple stem grooving virus in commercial apple seedlings and analysis of its coat protein sequence - (Peer Reviewed Journal)
Han, J., Park, C., Seo, E., Kim, J., Hammond, J., Lim, H. 2016. Occurrence of Apple stem grooving virus in commercial apple seedlings and analysis of its coat protein sequence. CNU Journal of Agricultural Science. 43:21-27.
A computer program for fast and easy typing of partial endoglucanase gene sequence into phylotypes and sequevars 1&2 (select agents) of Ralstonia solanacearum - (Peer Reviewed Journal)
Stalberg, M., Huang, Q. 2016. A computer program for fast and easy typing of partial endoglucanase gene sequence into phylotypes and sequevars 1&2 (select agents) of Ralstonia solanacearum. Journal of Microbiological Methods. 123:101-107.
Functional analysis of the ferric uptake requlator gene, fur, in Xanthomonas vesicatoria - (Peer Reviewed Journal)
Liu, H., Dong, C., Zhao, T., Han, J., Wang, T., Wen, X., Yang, G., Huang, Q. 2016. Functional analysis of the ferric uptake requlator gene, fur, in Xanthomonas vesicatoria. PLoS One. doi:10.1371/journal.pone.0149280.
2015 nationwide survey revealed Barley stripe mosaic virus in Korean barley fields - (Peer Reviewed Journal)
Lim, H., Seo, E., Kim, H., Kim, J., Park, C., Gong, J., Him, I., Han, A., Kilcrease, J.P., Tsuchiya, K., Hammond, J., Lim, H. 2016. 2015 nationwide survey revealed Barley stripe mosaic virus in Korean barley fields. Journal of Faculty of Agriculture. 61:71-77.
A TaqMan-based multiplex qPCR assay and DNA extraction method for phylotype IIB sequevars 1&2 (select agent) strains of Ralstonia solanacearum - (Peer Reviewed Journal)
Stulberg, M.J., Huang, Q. 2015. A TaqMan-based multiplex qPCR assay and DNA extraction method for phylotype IIB sequevars 1&2 (select agent) strains of Ralstonia solanacearum. PLoS One. doi:10.1371/journal.pone.0139637.
Survey of viruses present in radish fields in 2014 - (Peer Reviewed Journal)
Chung, J., Kim, J., Ju, H., Han, J., Seo, E., Hammond, J., Lim, H. 2015. 2014 nationwide survey revealed Turnip mosaic virus, Radish mosaic virus and Cucumber mosaic virus as the major viruses in Korean Radish Fields. Research in Plant Disease. 21:235-242.
Create the genus Pelarspovirus in the family Tombusviridae - (Peer Reviewed Journal)
(24-Jul-15)
Leek yellow stripe virus isolates from Brazil form a distant clade based on the P1 gene - (Peer Reviewed Journal)
Bampi, D., Mituti, T., Paven, M.A., Hammond, J., Krause-Sakate, R. 2015. Leek yellow stripe virus isolates from Brazil form a distant clade based on the P1 gene. Journal of Plant Pathology. 97:457-463.
Pelarspovirus, a proposed new genus in the family Tombusviridae - (Peer Reviewed Journal)
Scheets, K., Jordan, R.L., White, A., Hernandez, C. 2015. Pelarspovirus, a proposed new genus in the family Tombusviridae. Archives of Virology. 160:2385-2393.
Survey of apple chlorotic leaf spot virus and apple stem grooving virus occurrence in Korea and frequency of mixed infections in apple - (Peer Reviewed Journal)
Han, J., Kim, J., Cheong, J., Seo, E., Park, C., Ju, H., Cho, I., Gotoh, T., Moon, J., Hammond, J., Lim, H. 2015. Survey of apple chlorotic leaf spot virus and apple stem grooving virus occurrence in Korea and frequency of mixed infections in apple. Journal of Faculty of Agriculture. 60:323-329.
A 2014 nationwide survey of the distribution of Soybean mosaic virus (SMV), Soybean yellow mottle mosaic virus (SYMMV) and Soybean yellow common mosaic virus (SYCMV) major viruses in South Korean soybean fields, and changes.. - (Peer Reviewed Journal)
Li, M., Seo, E., Cho, S., Kim, J., Chung, J., Lim, H., Gotoh, T., Hammond, J., Lim, H. 2015. A 2014 nationwide survey of the distribution of Soybean mosaic virus (SMV), Soybean yellow mottle mosaic virus (SYMMV) and Soybean yellow common mosaic virus (SYCMV) major viruses in South Korean soybean fields, and changes... Journal of Faculty of Agriculture. 60:339-347.
Utilization of a tobacco rattle virus vector to clone an Nicotiana benthamiana cDNA library for VIGS - (Peer Reviewed Journal)
Seo, E., Kim, H., Kim, J., Gotoh, T., Hammond, J., Lim, H. 2015. Utilization of a tobacco rattle virus vector to clone an Nicotiana benthamiana cDNA library for VIGS. Journal of Faculty of Agriculture. 60:331-337.
Specific detection and identification of mulberry-infecting strains of Xylella fastidiosa by polymerase chain reaction - (Peer Reviewed Journal)
Guan, W., Shao, J.Y., Davis, R.E., Zhao, T., Huang, Q. 2015. Specific detection and identification of mulberry-infecting strains of Xylella fastidiosa by polymerase chain reaction. PLoS One. DOI: 10.1371/journal.pone.0129330.
Viruses present in ornamental Allium in the United States - (Abstract Only)
(08-May-15)
Detection of Helenium virus S and two distinct isolates of Butterbur mosaic virus in a single plant of Veronica - (Abstract Only)
(05-May-15)
Comparison of helper component-protease RNA silencing suppression activity, subcellular localization, and aggregation of three Korean isolates of Turnip mosaic virus - (Peer Reviewed Journal)
Han, J., Chung, J., Kim, J., Seo, E., Kilcrease, J.P., Bauchan, G.R., Lim, S., Hammond, J., Lim, H. 2016. Comparison of helper component-protease RNA silencing suppression activity, subcellular localization, and aggregation of three Korean isolates of Turnip mosaic virus. Virus Genes. 52:592-596.
A high throughput soybean gene identification system developed using soybean yellow common mosaic virus (SYCMV) - (Peer Reviewed Journal)
Seo, E., Cho, S., Moon, J.S., Gotoh, T., Kim, H., Domier, L.L., Hammond, J., Lim, H., Song, K. 2015. A high throughput soybean gene identification system developed using soybean yellow common mosaic virus (SYCMV). Journal of Faculty of Agriculture. 60:127-138.
Developing an Alternanthera mosaic virus vector for efficient clonging of Whitefly cDNA RNAi to screen gene function - (Peer Reviewed Journal)
Ko, N., Kim, H., Kim, J., Cho, S., Seo, E., Kwon, H., Yu, Y., Gotoh, T., Hammond, J., Youn, Y., Lim, H. 2015. Developing an Alternanthera mosaic virus vector for efficient clonging of Whitefly cDNA RNAi to screen gene function. Journal of Faculty of Agriculture. 60:139-149.
First report of Plantago asiatica mosaic virus in imported Asiatic and Oriental lilies (Lilium hybrids) in the United States     Reprint Icon - (Peer Reviewed Journal)
Hammond, J., Bampi, D., Reinsel, M.D. 2015. First report of Plantago asiatica mosaic virus in imported Asiatic and Oriental lilies (Lilium hybrids) in the United States. Plant Disease. 99:292.
A multiplex PCR assay to detect and differentiate select agent strains of Ralstonia solanacearum - (Peer Reviewed Journal)
Stulberg, M.J., Shao, J.Y., Huang, Q. 2014. A multiplex PCR assay to detect and differentiate select agent strains of Ralstonia solanacearum. Applied and Environmental Microbiology. 99:333-341.
Create four new unassigned species in the family Tombusviridae     Reprint Icon - (Peer Reviewed Journal)
Scheets, K., Hernandez, C., Jordan, R.L., White, A. 2014. Create four new unassigned species in the family Tombusviridae. Archives of Virology. DOI:10.1007/s00705-015-2500-5.
Genome sequence of a Xylella fastidiosa strain causing sycamore leaf scorch disease in Virginia - (Peer Reviewed Journal)
Guan, W., Shao, J.Y., Davis, R.E., Zhao, T., Huang, Q. 2014. Genome sequence of a Xylella fastidiosa strain causing sycamore leaf scorch disease in Virginia. Genome Announcements. 2(4):e00773-14.
First detection in the United States of Ligustrum necrotic ringspot virus in Mazus reptans with mild mosaic symptoms, in mixed infection with Cucumber mosaic virus     Reprint Icon - (Peer Reviewed Journal)
Henderson, D., Reinsel, M.D., Fischer, K., Hammond, J. 2015. First detection in the United States of Ligustrum necrotic ringspot virus in Mazus reptans with mild mosaic symptoms, in mixed infection with Cucumber mosaic virus. Plant Disease. 98(10):1446.
Selective interaction between Chloroplast B ATPase and TGB1 retards severe symptoms caused by Alternanthera mosaic virus infection - (Peer Reviewed Journal)
Seo, E., Nam, J., Kim, H., Lakshman, D.K., Bae, H., Hammond, J., Lim, H. 2014. Selective interaction between Chloroplast B ATPase and TGB1 retards severe symptoms caused by Alternanthera mosaic virus infection. Plant Pathology Journal. 11736-11743.
Detection of mixed virus population in freesea plants with necrotic disease - (Peer Reviewed Journal)
Vaira, A., Vallino, M., Lenzi, R., Masenga, V., Lisa, V., Constatini, A., Salvi, D., Carra, A., Hammond, J. 2015. Detection of mixed virus population in freesea plants with necrotic disease. Acta Horticulturae. 1072:173-178.
Variability in alternanthera mosaic virus isolates from different hosts - (Peer Reviewed Journal)
Hammond, J., Reinsel, M.D. 2015. Variability in alternanthera mosaic virus isolates from different hosts. Acta Horticulturae. 1072:47-52.
Progress in development of a Universal Plant Virus Micrarray for the detection and identification of plant viruses - (Peer Reviewed Journal)
Hammond, J., Henderson, D.C., Bagewadi, B., Jordan, R.L., Perr, K., Melcher, U., Wang, D., Fischer, K., Fauquet, C. 2015. Progress in development of a Universal Plant Virus Micrarray for the detection and identification of plant viruses. Acta Horticulturae. 1072:149-156.
Sequence variability in HC-Pro genes of Korean Soybean mosaic virus isolates is associated with differences in gene silencing suppression     Reprint Icon - (Peer Reviewed Journal)
Li, M., Kim, J., Seo, E., Hwang, E., Domier, L.L., Hammond, J., Youn, Y., Lim, H. 2014. Sequence variability in HC-Pro genes of Korean Soybean mosaic virus isolates is associated with differences in gene silencing suppression. Archives of Virology. 159(6):1373-1383.
Occurrance in Korea of three major soybean viruses, Soybean mosaic virus (SMV), Soybean yellow mottle mosaic virus (SYCMV), and Soybean yellow common mosaic virus (SYCMV) revealed by a nationwide survey of soybean fields     Reprint Icon - (Peer Reviewed Journal)
Cho, S., Kim, J., Li, M., Seo, E., Lim, S., Moon, J., Hammond, J., Lim, H. 2013. Occurrance in Korea of three major soybean viruses, Soybean mosaic virus (SMV), Soybean yellow mottle mosaic virus (SYCMV), and Soybean yellow common mosaic virus (SYCMV) revealed by a nationwide survey of soybean fields. Research in Plant Disease. 19(4):313-325.
Possible role of the Nt-4/1 protein in macromolecular transport in vascular tissue - (Peer Reviewed Journal)
Solovyev, A.G., Makarova, S.S., Remizowa, M.V., Lim, H., Hammond, J., Owens, R.A., Kopertech, L., Schiemann, J., Morozov, S.Y. 2013. Possible role of the Nt-4/1 protein in macromolecular transport in vascular tissue. Plant Signaling and Behavior. 8(10):e25784.
AltMV TGB1 nucleolar localization requires homologous interaction and correlates with cell wall localization associated with cell-to-cell movement     Reprint Icon - (Peer Reviewed Journal)
Nam, J., Nam, M., Bae, H., Lee, C., Lee, B., Hammond, J., Lim, H. 2013. AltMV TGB1 nucleolar localization requires homologous interaction and correlates with cell wall localization associated with cell-to-cell movement. Plant Pathology Journal . 29(4):454-459.
Interactions with the actin cytoskeleton are required for cell wall localization of barley stripe mosaic virus TGB proteins - (Peer Reviewed Journal)
Lim, H., Lee, M., Jang, C., Nam, J., Bae, H., Ju, H., Lee, M., Yu, Y., Hammond, J., Jackson, A.O. 2013. Interactions with the actin cytoskeleton are required for cell wall localization of barley stripe mosaic virus TGB proteins. Plant Pathology Journal . 29:17-30.
First report of Freesia sneak virus associated with foliar necrosis of Freesia refracto in Bulgaria     Reprint Icon - (Peer Reviewed Journal)
Bobev, S.G., Taphradjiiski, O.I., Hammond, J., Vaira, A. 2013. First report of Freesia sneak virus associated with foliar necrosis of Freesia refracto in Bulgaria. Plant Disease. 97:1514.
Insights into Alternanthera mosaic virus TGB3 functions: Interactions with Nicotiana benthamiana PsbO correlate with chloroplast vesiculation and veinal necrosis caused by TGB3 overexpression - (Peer Reviewed Journal)
Jang, C., Seo, E., Nam, J., Bae, H., Gim, Y., Cho, I., Lee, Z., Bauchan, G.R., Hammond, J., Lim, H. 2013. Insights into Alternanthera mosaic virus TGB3 functions: Interactions with Nicotiana benthamiana PsbO correlate with chloroplast vesiculation and veinal necrosis caused by TGB3 overexpression. Frontiers in Plant Science. http://dx.doi.org/10.3389/fpls.2013.00005.
First report of Nerine yellow stripe virus in Amaryllis in the United States - (Peer Reviewed Journal)
Guaragna, M.A., Lamborn, J., Hammond, J., Schadewijk, T., Jordan, R.L. 2013. First report of Nerine yellow stripe virus in Amaryllis in the United States. Plant Disease. 97(10):1389.
Last Modified: 8/26/2016
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