Projects

Positional Cloning in Maize of Genes That Regulate Plant Architecture Appropriated (D)   Accession Number: 410649

Molecular Mechanisms of Phytochrome Signaling and Gene Regulation Appropriated (D)   Accession Number: 410645

Maintenance of Polarity in the Maize Leaf Reimbursable (R)   Accession Number: 413441

The Control of Maize Leaf Differentiation and Biomass Accumulation by the Spl Transcription Factor Family Reimbursable (R)   Accession Number: 414531

Agricultural Crop Enhancement Through Molecular and Genetic Research on Mechanisms of Plant Growth, Development, and Survival Specific Cooperative Agreement (S)   Accession Number: 409112

Agricultural Crop Improvement Through Genomic and Molecular Research on Mechanisms of Plant Growth and Adaption to a Changing Environment Specific Cooperative Agreement (S)   Accession Number: 415222

Publications

The Maize Transcription Factor KNOTTED1 Directly Regulates the Gibberellin Catabolism Gene ga2ox1 - (Peer Reviewed Journal)

Bolduc, N., Hake, S.C. 2009. The Maize Transcription Factor KNOTTED1 Directly Regulates the Gibberellin Catabolism Gene ga2ox1. The Plant Cell, 10.1105/tpc.109.068221.

The Interaction of knotted1 and thick tassel dwarf1 in Vegetative and Reproductive Meristems of Maize - (Peer Reviewed Journal)

Lunde, C., Hake, S.C. 2009. The Interaction of knotted1 and thick tassel dwarf1 in Vegetative and Reproductive Meristems of Maize. Genetics (Epub 1/19/09) 191(4):1693-7.

Inflorescence Architecture: The Transition from Branches to Flowers - (Review Article)

Hake, S.C. 2008. Inflorescence Architecture: The Transition from Branches to Flowers. Current Biology, 18(23):R1106-R1108.

Big Impacts by Small RNAs in Plant Development - (Review Article)

Chuck, G.S., Candela Anton, H., Hake, S.C. 2009. Big Impacts by Small RNAs in Plant Development. Current Opinion in Plant Biology 12(1):81-6, Epub 2008 Nov 6.

Translational Biology: From Arabidopsis Flowers to Grass Inflorescence Architecture - (Peer Reviewed Journal)

Thompson, B.E., Hake, S.C. 2008. Translational Biology: From Arabidopsis Flowers to Grass Inflorescence Architecture. Plant Physiology 149(1):38-45.

A Recommendation for Naming Transcription Factor Proteins in the Grasses - (Peer Reviewed Journal)

Gray, J., Bevan, M., Brutnell, T., Buell, C., Cone, K., Hake, S.C., Jackson, D., Kellogg, E., Lawrence, C.J., Mccouch, S., Mockler, T., Moose, S., Paterson, A., Peterson, T., Rokshar, D., Souza, G., Springer, N., Stein, N., Timmermans, M., Wang, G., Grotewold, E. 2009. A Recommendation for Naming Transcription Factor Proteins in the Grasses. Plant Physiology. 149(1):4-6.

Floral meristem initiation and meristem cell fate are regulated by the maize AP2 genes ids1 and sid1 - (Peer Reviewed Journal)

Chuck, G.S., Meeley, R., Hake, S.C. 2008. Floral meristem initiation and meristem cell fate are regulated by the maize AP2 genes ids1 and sid1. Development 135: 3013-3019.

The milkweed pod1 Gene Encodes a KANADI Protein That Is Required for Abaxial/Adaxial Patterning in Maize Leaves - (Peer Reviewed Journal)

Candela Anton, H., Johnston, R., Gerhold, A., Foster, T., Hake, S.C. 2008. The milkweed pod1 Gene Encodes a KANADI Protein That Is Required for Abaxial/Adaxial Patterning in Maize Leaves. The Plant Cell 20:2073-2087.

Dual Functions of the KNOTTED1 Homeodomain: Sequence-Specific DNA Binding and Regulation of Cell-to-Cell Transport - (Peer Reviewed Journal)

Bolduc, N., Hake, S.C., Jackson, D. 2008. Dual Functions of the KNOTTED1 Homeodomain: Sequence-Specific DNA Binding and Regulation of Cell-to-Cell Transport. American Association for the Advancement of Science Meeting, 1:23, p. pe28.

Knox Lost the Ox: the Arabidopsis Knatm Gene Defines a Novel Class of Knox Transcriptional Regulators Missing the Homeodomain - (Peer Reviewed Journal)

Magnani, E., Hake, S.C. 2008. KNOX Lost the OX: The Arabidopsis KNATM Gene Defines a Novel Class of KNOX Transcriptional Regulators Missing the Homeodomain. The Plant Cell 9:875-887.

The art and design of genetic screens: maize - (Review Article)

Candela Anton, H., Hake, S.C. 2008. The art and design of genetic screens: maize. Nature Reviews Genetics 9:192-203.

The maize tasselseed4 microRNA controls sex determination and meristem cell fate by targeting Tasselseed6/indeterminate spikelet1 - (Peer Reviewed Journal)

Chuck, G.S., Meely, R., Irish, E., Sakai, H., Hake, S.C. 2007. The maize tasselseed4 microRNA controls sex determination and meristem cell fate by targeting Tasselseed6/indeterminate spikelet1. Nature Genetics 39(12):1517-1521.

Barren inflorescence2 Encodes a Co-ortholog of the PINOID Serine/threonine Kinase and Is Required for Organogenesis during Inflorescence and Vegetative Development in Maize - (Peer Reviewed Journal)

Mcsteen, P., Malcomber, S., Skirpan, A., Lunde, C., Wu, X., Kellogg, E., Hake, S.C. 2007. Barren inflorescence2 Encodes a Co-ortholog of the PINOID Serine/threonine Kinase and Is Required for Organogenesis during Inflorescence and Vegetative Development in Maize. Plant Physiology Plant Physiology 144 (10.1104): 107.098558.

The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA - (Peer Reviewed Journal)

Chuck, G.S., Cigan, A., Saeteurn, K., Hake, S.C. 2007. The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA. Nature Genetics, 39(4):544-549.

The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA - (Peer Reviewed Journal)

Chuck, G.S., Cigan, M.A., Saetrun, K., Hake, S.C. 2007. The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA. Nature Genetics 39(4)544-549.

Flowering and Determinacy in Maize - (Review Article)

Bortiri, E., Hake, S.C. 2007. Flowering and Determinacy in Maize. Journal of Experimental Biology Online, Vol 3, 58(5):909-16. Epub 2007 Mar 3.

From gateway to multisite gateway in one recombination event - (Peer Reviewed Journal)

Magnani, E., Bartling, L., Hake, S.C. 2006. From gateway to multisite gateway in one recombination event. BMC Microbiology 7(1):46.

Advances in Maize Genomics: the Emergence of Positional Cloning - (Review Article)

Bortiri, E., Jackson, D., Hake, S.C. 2006. Advances in maize genomics: the emergence of positional cloning. Current Opinion in Plant Biology, 9(2):164-171.

Ramosa2 Encodes a Lateral Organ Boundary Domain Protein That Determines the Fate of Stem Cells in Branch Meristems of Maize - (Peer Reviewed Journal)

Bortiri, E., Chuck, G.S., Vollbrecht, E., Rocheford, T., Martienssen, R., Hake, S.C. 2006. ramosa2 Encodes a LATERAL ORGAN BOUNDARY Domain Protein That Determines the Fate of Stem Cells in Branch Meristems of Maize. The Plant Cell. 18:574-585.

Florets and Rosettes: Meristem Genes in Maize and Arabidopsis - (Peer Reviewed Journal)

Lunde, C., Hake, S.C. 2005. Florets and Rosettes: Meristem Genes in Maize and Arabidopsis. Maydica, 50:451-458.

Fertility Versus Disease Resistance, a Hard Choice - (Peer Reviewed Journal)

Bart, R., Ronald, P., Hake, S.C. 2006. Fertility versus disease resistance, a hard choice. Genes and Development. 20:1215-1217.

Thick Tassel Dwarf1 Encodes a Putative Maize Ortholog of the Arabidopsis Clavata1 Leucine-Rich Repeat Receptor-Like Kinase - (Peer Reviewed Journal)

Bommert, P., Lunde, C., Nardmann, J., Vollbrecht, E., Running, M., Jackson, D., Hake, S.C., Werr, W. 2005. Thick tassel dwarf1 encodes a putative maize ortholog of the Arabidopsis CLAVATAL1 leucine-rich repeat receptor-like kinase. Development, 132:1235-1245.

Regulation of Developmental Transitions - (Review Article)

Chuck, G.S., Hake, S.C. 2004. Regulation of developmental transitions. Current Opinion in Plant Biology, 8(1):67-70.

Principles of Developmental Biology - (Other)

Wilt, F.H., Hake, S.C. 2004. Principles of Developmental Biology. Complete Book. New York, NY. W.W. Norton & Company, Inc. ISBN 0-393-97430-8, 450 p.

From Endonucleases to Transcription Factors: Evolution of the Ap2 DNA Binding Domain in Plants - (Peer Reviewed Journal)

Magnani, E., Sjolander, K., Hake, S.C. 2004. From Endonucleases to Transcription Factors: Evolution of the AP2 DNA Binding Domain in Plants. The Plant Cell 16:2265-2277

The Role of Knox Genes in Plant Development - (Review Article)

Hake, S.C., Smith, H.M., Holtan, H., Magnani, E., Mele, G., Ramirez, J. 2004. The Role of KNOX Genes in Plant Development. Annual Reviews of Cell and Developmental Biology, 20:125-151.

The Establishment of Axial Patterning in the Maize Leaf - (Peer Reviewed Journal)

Foster, T., Hay, A., Hake, S.C. 2004. The establishment of axial patterning in the maize leaf. Development, 131:3921-3929.

Competence to Respond to Floral Inductive Signals Requires the Homeobox Genes Pennywise and Pound-Foolish - (Peer Reviewed Journal)

Smith, H.M., Campbell, B.C., Hake, S.C. 2004. Competence to Respond to Floral Inductive Signals Requires the Homebox Genes PENNYWISE and POUND-FOOLISH. Current Biology 14(9):812-817.

The Dominant Mutant Wavy Auricle in Blade1 Disrupts Patterning in a Lateral Domain of the Maize Leaf - (Peer Reviewed Journal)

Hay, A., Hake, S.C. 2004. The Dominant Mutant Wavy auricle in blade1 Disrupts Patterning in a Lateral Domain of the Maize Leaf. Plant Physiology 135:300-308.

The Maize Id1 Flowering Time Regulator Is a Zinc Finger Protein with Novel DNA Binding Properties - (Peer Reviewed Journal)

Kozaki, A., Hake, S.C., Colasanti, J. 2004. The maize ID1 flowering time regulator is a zinc finger protein with novel DNA binding properties. Nucleic Acids Research, 12;32(5):1710-20.

Exploiting Quantitative Trait Loci in Gene Discovery - (Review Article)

Hake, S.C., Rocheford, T. 2004. Exploiting quantitative trait loci in gene discovery. Genes and Development, 18:597-601.

Frontiers in Plant Genetics - (Review Article)

Hake, S.C. 2003. Frontiers in plant genetics. Genome Biology, 5:302.

Micrornas: a Role in Plant Development - (Peer Reviewed Journal)

HAKE, S.C. MICRORNAS: A ROLE IN PLANT DEVELOPMENT. CURRENT BIOLOGY. 2003. v. 13:21, R851-R852.

Quantitative Trait Locus Analysis of Leaf Dissection in Tomato Using Lycopersicon Pennellii Segmental Introgression Lines - (Peer Reviewed Journal)

Holtan, H.E., Hake, S.C. 2003. Quantitative Trait Locus Analysis of Leaf Dissection in Tomato Using Lycopersicon Pennellii Segmental Introgression Lines. Genetics 165:1541-1550.

The Knotted1-Like Homeobox Gene Brevipedicellus Regulates Cell Differentiation by Modulating Metabolic Pathways - (Peer Reviewed Journal)

MELE, G., ORI, N., SATO, Y., HAKE, S.C. 2003. The knotted1-like homeobox gene BREVIPEDICELLUS regulates cell differentiation by modulating metabolic pathways. 2003. GENES & DEVELOPMENT 17:2088-2093.

The Interaction of Two Homeobox Genes, Brevipedicellus and Pennywise, Regulates Internode Patterning in the Arabidopsis Inflorescence - (Peer Reviewed Journal)

Smith, H.M., Hake, S.C. The Interaction of Two Homeobox Genex, BREVIPEDICELLUS and PENNYWISE, Regulates Internode Patterning in the Arabidopsis Inflorescence. The Pant Cell. 2003. 15:1717-27.

Analysis of the Competence to Respond to Knotted1 Activity in Arabidopsis Leaves Using a Sterioid Induction System - (Peer Reviewed Journal)

HAY, A., DAVID, J., ORI, N., HAKE, S.C. 2003. Analysis of the Competence to Respond to KNOTTED1 Activity in Arabidopsis Leaves Using a Sterioid Induction System. Plant Physiology 131:1671-1680.

Expression Profiling of Plant Development - (Peer Reviewed Journal)

MELE, G., HAKE, S.C. EXPRESSION PROFILING OF PLANT DEVELOPMENT. GENOME BIOLOGY. 2003. 4:215.

The Development of Plant Leaves - (Peer Reviewed Journal)

MICOL, J., HAKE, S.C. THE DEVELOPMENT OF PLANT LEAVES. PLANT PHYSIOLOGY. 2003. 131:389-394.

Expression Patterns and Mutant Phenotype of Teosinte Branched1 Correlate with Growth Suppression in Maize and Teosinte - (Peer Reviewed Journal)

HUBBARD, L., MCSTEEN, P.C., DOEBLEY, J., HAKE, S.C. EXPRESSION PATTERNS AND MUTANT PHENOTYPE OF TEOSINTE BRANCHED1 CORRELATE WITH GROWTH SUPPRESSION IN MAIZE AND TEOSINTE. GENETICS. 2002. 162:1927-1935.

The Control of Spikelet Identity by the Branched Silkless1 Gene in Maize - (Peer Reviewed Journal)

CHUCK, G.S., MUSZYNSKI, M., KELLOGG, E., HAKE, S.C., SCHMIDT, R.J. THE CONTROL OF SPIKELET IDENTITY BY THE BRANCHED SILKLESS1 GENE IN MAIZE. SCIENCE. 2003. 298*5596):1238-41.

The Gibberellin Pathway Mediates Knotted1-Type Homeobox Function in Plants with Different Body Plans - (Peer Reviewed Journal)

HAY, A., KAUR, H., PHILLIPS, A., HEDDEN, P., HAKE, S.C., TSIANTIS, M. THE GIBBERELLIN PATHWAY MEDIATES KNOTTED1-TYPE HOMEOBOX FUNCTION IN PLANTS WITH DIFFERENT BODY PLANS. CURRENT BIOLOGY. 2002. 12:18:1557-1565.

Plant Development Makes Strides in Vermont - (Abstract)

FLETCHER, J.C., HAKE, S.C. PLANT DEVELOPMENT MAKES STRIDES IN VERMONT. DEVELOPMENTAL CELL 3:479-485, October 2002.

Selective Interaction of Plant Homeodomain Proteins Mediates High Dna-Binding Affinity - (Peer Reviewed Journal)

Smith, H.M., Boschke, I., Hake, S.C. 2002. Selective interaction of plant homeodomain proteins mediates high DNA-binding affinity. Proceedings of the National Academy of Sciences, 99(14):9579-9584.

Plant Morphogenesis and Knox Genes - (Review Article)

Hake, S.C., Ori, N. 2002. Plant morphogenesis and KNOX genes. Nature Genetics, 31(2):121-122.

Biodiversity (Communications Arising): Maize Transgene Results in Mexico Are Artefacts - (Review Article)

Kaplinsky, N., Braun, D., Lisch, D., Hay, A., Hake, S.C., Freeking, M. 2002. Biodiversity (communications arising): maize transgene results in Mexico are artefacts. Nature 416:601-602.

The Indeterminate Floral Apex1 Gene Regulates Meristem Determinacy and Identity in the Maize Inflorescence - (Peer Reviewed Journal)

Laudencia-Chingcuanc, D., Hake, S.C. 2002. The indeterminate floral apex1 gene regulates meristem determinacy and identity in the maize inflorescence. Development 129:2629-2638.

The Fasciated Ear2 Gene Encodes a Leucine-Rich Repeat Receptor-Like Protein That Regulates Shoot Meristem Proliferation in Maize - (Peer Reviewed Journal)

Taguchi-Shiobara, F., Hake, S.C., Jackson, D. 2001. The fasciated ear2 gene encodes a leucine-rich repeat receptor-like protein that regulates shoot meristem proliferation in maize. Genes and Development, 15(2):2755-2766.

Barren Inflorescence2 Regulates Axillary Meristem Development in the Maize Inflorescence - (Peer Reviewed Journal)

Mcsteen, P.C., Hake, S.C. 2001. Barren inflorescence2 regulates axillary meristem development in the maize inflorescence. Development 128:2881-2891.

Transcription Factors on the Move - (Peer Reviewed Journal)

Hake, S.C. 2001. Transcription factors on the move. Trends in Genetics, 17(1):2-3.

The Role of Floral Meristems in Patterning - (Literature)

Running, M., Hake, S.C. 2001. The role of floral meristems in patterning. Current Opinion in Plant Biology, 4(1):69-74.

Mechanisms That Control Knox Gene Expression in the Arabidopsis Shoot - (Peer Reviewed Journal)

Hake, S.C., Ori, N., Eshed, Y., Chuck, G., Bowman, C.G. 2000. Mechanisms that control knox gene expression in the Arabidopsis shoot. Development, 127(24):5523-5532.

Mobile Protein Signals Cell Fate - (Review Article)

Hake, S.C. 2001. Mobile protein signals cell fate. Nature 413:261-264.

Regulation of Leaf Initiation by the Terminal Ear 1 Gene of Maize - (Peer Reviewed Journal) - (14-May-98)

The Control of Maize Spikelet Meristem Fate by the Apetala2-Like Gene Indeterminate Spikelet1 - (Peer Reviewed Journal)

Chuck, G., Meeley, R.B., Hake, S.C. 1998. The control of maize spikelet meristem fate by the APETALA2-like gene indeterminate spikelet1. Genes and Development 12(8):1145-1154.

Genetic Control of Plant Development genetic Control of Plant Development genetic Control of Plant Development - (Review Article) - (01-Apr-98)

Mu Element-Generated Gene Conversions in Maize Attenuate the Dominant Knotted Phenotype - (Peer Reviewed Journal)

Mathern, J., Hake, S.C. 1997. Mu element-generated gene conversions in maize attenuate the dominant knotted phenotype. Genetics 147(1):305-14.

Ectopic Expression of the Maize Kn1 Gene Phenocopies the Hooded Mutant of Barley - (Peer Reviewed Journal)

Williams-Carter, R.E., Lie, Y.S., Hake, S.C., Lemaux, P.G. 1997. Ectopic expression of the maize kn1 gene phenocopies the Hooded mutant of barley. Development 124:3737-3745.

Morphogenesis on the Move: Cell-to-Cell Trafficking of Plant Regulatory Proteins - (Review Article)

Jackson, D., Hake, S.C. 1997. Morphogenesis on the move: cell-to-cell trafficking of plant regulatory proteins. Current Opinion in Genetics and Development 7(4) 495-500.

Loss-of-Function Mutations in the Maize Homeobox Gene, Knotted1, Are Defective in Shoot Meristem Maintenance - (Peer Reviewed Journal)

Kerstetter, R.A., Laudencia-Chigcuangc, D., Hake, S.C. 1997. Loss-of-function mutations in the maize homeobox gene, knotted1, are defective in shoot meristem maintenance. Development 124:3045-3054.

Isolation and Characterization of Two Knotted-Like Homeobox Genes from Tomato - (Peer Reviewed Journal) - (23-Apr-97)

Shootmeristemless Ties the Knot - (Review Article)

Hake, S.C. 1996. Shootmeristemless ties the knot. Trends in Plant Science 1(3):75-76.