Welcome to the software download area! Please contact us if you have problems or questions.
OTUshuff is a set of tools written in Perl to identify and correct for the presence of pseudo •-diversity in contrasts between microbial communities. The variably weighted Odum dissimilarity (DwOdum) allows for down-weighting the influence of either abundant or rare taxa in calculating a measure of similarity between two communities. We show that down-weighting the influence of rare taxa can be used to minimize pseudo b-diversity arising from incomplete sampling. Down-weighting the influence of abundant taxa can increase the sensitivity of hypothesis testing. OTUshuff is an associated test for identifying the presence of pseudo •-diversity in pairwise community contrasts.
Download FormPlease complete the form below to track the use of the service we are providing and to help improve our product.
OMB 0518 - 0032 (02/2022)
According to the Paperwork Reduction Act of 1995, an agency cannot conduct or sponsor, and a person is not required to respond to, a collection of information unless it displays a valid OMB control number. The valid OMB control number for this information collection is 0518-0032. The time required to complete this information is estimated to vary from one to five minutes with an average of three minutes per response, including time for reviewing instructions, and completing and reviewing the collection of information. Send comments regarding this burden estimate or any other aspect of this collection of information, including suggestions for reducing this burden, to Department of Agriculture, Clearance Officer, OIRM, Room 404-W, Washington, DC 20250, and to the Office of Information and Regulatory Affairs, Office of Management and Budget.