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ARS Home » Pacific West Area » Parlier, California » San Joaquin Valley Agricultural Sciences Center » Crop Diseases, Pests and Genetics Research » Research » Publications at this Location » Publication #404927
Research Project: Identifying Vulnerabilities in Vector-host-pathogen Interactions of Grapevine and Citrus Pathosystems to Advance Sustainable Management Strategies

Location: Crop Diseases, Pests and Genetics Research

Title: Genome sequence resource for “Candidatus Liberibacter asiaticus” strain GDCZ from a historical HLB endemic region in China

Author
item ZHENG, YONGQIN - South China Agricultural Univerisity
item LI, CHAOJI - South China Agricultural Univerisity
item XU, PENGBIN - South China Agricultural Univerisity
item LIU, CHAOJI - South China Agricultural Univerisity
item Chen, Jianchi
item DENG, XIAOLING - South China Agricultural Univerisity
item ZHENG, ZHENG - South China Agricultural Univerisity

Submitted to: BMC Genomic Data
Publication Type: Peer Reviewed Journal
Publication Acceptance Date: 9/19/2023
Publication Date: 11/4/2023
Citation: Zheng, Y., Li, C., Xu, P., Liu, C., Chen, J., Deng, X., Zheng, Z. 2023. Genome sequence resource for “Candidatus Liberibacter asiaticus” strain GDCZ from a historical HLB endemic region in China. BMC Genomic Data. 24. Article 63. https://doi.org/10.1186/s12863-023-01160-3.
DOI: https://doi.org/10.1186/s12863-023-01160-3

Interpretive Summary: Citrus Huanglongbing (HLB, also called citrus greening disease) is a devastating disease in citrus cultivation around the world. The disease is caused by a non-culturable bacterial pathogen. Research in HLB has been highly challenging. This study acquired and published the whole genome sequence of an HLB pathogen strain collected from Chaozhou City of Guangdong Province, China, where HLB was first described over a hundred years ago. This genome sequence enriches the HLB pathogen genome database with a unique geographical reference and will benefit research in HLB epidemiology and evolution of the pathogen.

Technical Abstract: "Candidatus Liberibacter asiaticus" is a fastidious phloem-limited Gram-negative proteobacterium causing citrus Huanglongbing (HLB, yellow shoot disease). HLB has devastated citrus production around the world. Due to the nutritional fastidiousness, current knowledge about "Ca. L. asiaticus" is mostly derived from genomic analyses. This study acquired the whole genome sequence of "Ca. L. asiaticus" strain GDCZ collected from Chaozhou City of Guangdong Province, China, where HLB was first described over a hundred years ago. The GDCZ genome is 1,230,507 bp with G+C content of 36.4% and a Type 2 prophage. The genome sequence enriches "Ca. L. asiaticus" genome database with a unique geographical reference and will benefit research in HLB epidemiology and evolution of the pathogen.