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United States Department of Agriculture

Agricultural Research Service

Research Project: Conservation, Genetic Analyses, and Utilization of Subtropical/Tropical Fruit Crops, Sugarcane, and Miscanthus Genetic Resources

Location: Subtropical Horticulture Research

Title: The Genome of the Most Widely Cultivated Cacao Type and Its Use to Identify Candidate Genes Regulating Traits: Pod Color as an Example)

item Motamayor arias, Juan carlos
item Mockaitis, Keithanne
item Schmutz, Jeremy
item Haiminen, Niina
item Livingstone iii, Donald
item Cornejo, Omar
item Findley, Seth
item Zheng, Ping
item Utro, Filippo
item Royaert, Stefan
item Saski, Christopher
item Jenkins, Jerry
item Podicheti, Ram
item Zhao, Meixia
item Scheffler, Brian
item Feltus, Alex
item Amores, Freddy
item Phillips, Wilberth
item Marelli, Jean-philippe
item May, Gregory
item Shapiro, Howard-yana
item Ma, Jianxin
item Bustamante, Carlos
item Schnell, Raymond
item Main, Dorrie
item Gilbert, Don
item Parida, Laxmi
item Kuhn, David

Submitted to: Meeting Abstract
Publication Type: Abstract only
Publication Acceptance Date: 1/13/2013
Publication Date: 1/13/2013
Citation: Motamayor Arias, J., Mockaitis, K., Schmutz, J., Haiminen, N., Livingstone Iii, D.S., Cornejo, O., Findley, S.D., Zheng, P., Utro, F., Royaert, S., Saski, C., Jenkins, J., Podicheti, R., Zhao, M., Scheffler, B.E., Feltus, A.F., Amores, F.M., Phillips, W., Marelli, J., May, G., Shapiro, H., Ma, J., Bustamante, C., Schnell, R.J., Main, D., Gilbert, D., Parida, L., Kuhn, D.N. 2013. The Genome of the Most Widely Cultivated Cacao Type and Its Use to Identify Candidate Genes Regulating Traits: Pod Color as an Example. Meeting Abstract. Plant and Animal Genome Meeting XXI, January 12-16, 2013 San Diego, CA.

Interpretive Summary:

Technical Abstract: Theobroma cacao, the source of cocoa beans for chocolate, is an important tropical agriculture commodity that is affected by a number of fungal pathogens and insect pests, as well as concerns about yield and quality. We are trying to find molecular genetic markers that are linked to disease resistance and other important economic traits to aid in a marker assisted selection (MAS) breeding program for cacao to ensure a reliable supply of cocoa for the US confectionary industry. Matina 1-6 belongs to the most cultivated cacao type worldwide. Availability of its genome sequence and methods for identifying genes responsible for important cacao traits promise to greatly aid cacao researchers and breeders. A preliminary version of the Theobroma cacao L. Matina 1-6 genome (V0.9) was released to the public in 2010. Our results are important to scientists trying to understand the mechanism of disease resistance and, eventually, to cacao farmers who will benefit from superior disease resistant and more productive cultivars produced through our MAS breeding program.

Last Modified: 8/24/2016
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