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United States Department of Agriculture

Agricultural Research Service

Title: A DRAFT SEQUENCE OF THE RICE GENOME (ORYZA SATIVA L. SSP. INDICA))

Author
item Goff, S.
item Ricke, D.
item Lan, T.
item Presting, G.
item Wang, R.
item Dunn, M.
item Glazebrook, J.
item Sessions, A.
item Oeller, P.
item Quail, Peter

Submitted to: Science
Publication Type: Peer Reviewed Journal
Publication Acceptance Date: 4/5/2002
Publication Date: 4/5/2002
Citation: GOFF, S.A., RICKE, D., LAN, T.H., PRESTING, G., WANG, R., DUNN, M., GLAZEBROOK, J., SESSIONS, A., OELLER, P., QUAIL, P.H. A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica). SCENCE. 2002. 296(5565):79-92.

Interpretive Summary: We have determined the entire genome sequence of rice.

Technical Abstract: The genome of the japonica subspecies of rice, an important cereal and model monocot, was sequenced and assembled by whole-genome shotgun sequencing. The assembled sequence covers 93% of the 420-megabase genome. Gene predictions on the assembled sequence suggest that the genome contains 32,000 to 50,000 genes. Homologs of 98% of the known maize, wheat, and barley proteins are found in rice. Synteny and gene homology between rice and the other cereal genomes are extensive, whereas synteny with Arabidopsis is limited. Assignment of candidate rice orthologs to Arabidopsis genes is possible in many cases. The rice genome sequence provides a foundation for the improvement of cereals, our most important crops.

Last Modified: 8/24/2016
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