Location: Sugarcane Research
Publications
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The genomic footprint of wild Saccharum species in domesticated and modern sugarcanes
- (Peer Reviewed Journal)
Garsmeur, O., Rio, S., Pompidor, N., Hervouet, C., Lipzen, A., Durand, T., Hale, A.L., Sanchez, A.W., Barry, K., Schmutz, J., D'Hont, A. 2025. The genomic footprint of wild Saccharum species in domesticated and modern sugarcanes. Cell. https://doi.org/10.1016/j.cell.2025.09.017.
Sugarcane genotype by environment interaction (G × E) in clonal trials in the U.S. Texas Rio Grande Valley
- (Peer Reviewed Journal)
Todd, J.R., Coto Arbelo, O., Hale, A.L., Pan, Y., Dufrene Jr, E.O., Verdun, D.L., Momotaz, A., Kinbeng, A.K., Waguespack Jr, H.L., Scott, A., Hernandez, E., Klosterman, M. 2025. Sugarcane genotype by environment interaction (G × E) in clonal trials in the U.S. Texas Rio Grande Valley. Euphytica. https://doi.org/10.1007/s10681-025-03607-3.
Machine learning enables genomic prediction of resistance to sugarcane (Saccharum Spp. Hybrids) diseases in Louisiana
- (Peer Reviewed Journal)
Notice of release of sugarcane variety USDA-ARS HoCP 18-803
- (Trade Journal)
Selecting Single-dose Single Nucleotide Polymorphism (SNP) Markers for Accurate Identification of Sugarcane Clones (Saccharum spp. hybrids) Using KASP Genotyping
- (Abstract Only)
Exploiting historical agronomic data to develop genomic prediction strategies for clonal selection early in Louisiana sugarcane variety development program
- (Peer Reviewed Journal)
Shahi, D., Todd, J.R., Gravois, K., Hale, A.L., Blanchard, B., Collins, K., Pontif, M., Baisakh, N. 2024. Exploiting historical agronomic data to develop genomic prediction strategies for clonal selection early in Louisiana sugarcane variety development program. The Plant Genome. https://doi.org/10.1002/tpg2.20545.
Quantitative trait nucleotides associated with cane and sucrose yield across test environments and selection stages of sugarcane variety development
- (Abstract Only)
Sugarcane genetics: underlying theory and practical application
- (Peer Reviewed Journal)
Wang, H., Pan, Y., Wu, M., Liu, J., Yang, S., Wu, Q., Que, Y. 2024. Sugarcane genetics: underlying theory and practical application. The Crop Journal. https://doi.org/10.1016/j.cj.2024.11.005.
A genomic wide association study and genomic prediction for yield-related traits in a ‘LCP 85-384’-derived sugarcane mapping population
- (Peer Reviewed Journal)
Phiri, T.M., Xiong, H., Pan, Y., Dickson, R.W., Joshi, N., Rojas, A., Shi, A. 2024. A genomic wide association study and genomic prediction for yield-related traits in a ‘LCP 85-384’-derived sugarcane mapping population. Plant Breeding. https://doi.org/10.1111/pbr.13221.
Phenotypic evaluation of Saccharum spp. genotypes during the plant-cane crop for biomass production in northcentral Mississippi
- (Peer Reviewed Journal)
Baldwin, B.S., Hale, A.L., Eason, W.A., Morrison, J.I. 2024. Phenotypic evaluation of Saccharum spp. genotypes during the plant-cane crop for biomass production in northcentral Mississippi. Agriculture. Volume 14/8. https://doi.org/10.3390/agriculture14081375.
Near infrared prediction of sugarcane genotypes and yield
- (Abstract Only)
Development and integration of an SSR marker-based molecular identity database into Louisiana sugarcane breeding program
- (Abstract Only)
A genome-wide association study and genomic prediction for yield-related traits in a self-progeny mapping population of LCP 85-384 sugarcane.
- (Abstract Only)
Pan, Y., Xiong, H., Phiri, T., Song, J., Ming, R., Shi, A. 2024. A genome-wide association study and genomic prediction for yield-related traits in a self-progeny mapping population of LCP 85-384 sugarcane.. International Society of Sugar Cane Technologists Proceedings. abstract.
Development and integration of an SSR marker-based molecular identity database into Louisiana sugarcane breeding program
- (Abstract Only)
Near infrared sucrose yield trait prediction and cluster analysis
- (Abstract Only)