Location: Food Safety and Enteric Pathogens Research
Publications
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Comparative evaluation of antimicrobial activity of human granulysin, bovine and porcine NK-lysins against Shiga toxin-producing Escherichia coli O157:H7
- (Peer Reviewed Journal)
Biernbaum, E.N., Dassanayake, R.P., Nicholson, E.M., Kudva, I.T. 2023. Comparative evaluation of antimicrobial activity of human granulysin, bovine and porcine NK-lysins against Shiga toxin-producing Escherichia coli O157:H7. PLOS ONE. 18(9):e0292234. https://doi.org/10.1371/journal.pone.0292234.
Impact of butyrate on short-chain fatty acid receptor expression in porcine monocytes
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Detection B cell and antibody-secreting cell populations in pigs at RNA and protein levels
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BCG induced innate training in neonatal and weaned pigs is dependent on route of administration
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Altered cytokine production and gene expression by porcine monocytes following neonatal inoculation with bacillus Calmette-Guerin
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Bovine rectoanal junction-in vitro organ culture model system to study Shiga toxin-producing Escherichia coli adherence
- (Peer Reviewed Journal)
Kudva, I.T., Biernbaum, E.N., Cassmann, E.D., Palmer, M.V. 2023. Bovine rectoanal junction-in vitro organ culture model system to study Shiga toxin-producing Escherichia coli adherence. Microorganisms. 11(5). Article 1289. https://doi.org/10.3390/microorganisms11051289.
Integrative profiling of gene expression and chromatin accessibility elucidates specific transcriptional networks in porcine neutrophils
- (Peer Reviewed Journal)
Herrera Uribe, J., Lim, K., Byrne, K.A., Daharsh, L., Liu, H., Corbett, R.J., Marco, G., Schroyen, M., Koltes, J.E., Loving, C.L., Tuggle, C.K. 2023. Integrative profiling of gene expression and chromatin accessibility elucidates specific transcriptional networks in porcine neutrophils. Frontiers in Genetics. 14. Article 1107462. https://doi.org/10.3389/fgene.2023.1107462.
Metagenomic detection and binning of plasmids for an improved understanding of the risk of antimicrobial resistance gene transfer events
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Non-fimbrial adhesins effect Escherichia coli O157:H7 biofilm formation on post-harvest food products
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Comparative evaluation of antimicrobial activity of human granulysin, bovine and porcine NK-lysins against Shiga toxin-producing Escherichia coli O157:H7
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Pseudotemporal and spatial organization of B cell activation and differentiation in Peyer’s patches
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Model systems to study Shiga toxin-producing Escherichia coli interactions with the bovine gastrointestinal tract
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Pangenome analyses of bovine rectoanal junction squamous epithelial cell–specific adherence factors in E. coli
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Insights into animal carriage and pathogen surveillance in Latin America: The case of STEC and APEC
- (Book / Chapter)
Galarcea, N., Sanchez, F., Kudva, I.T., Biernbaum, E.N., Knobl, T., Saidenberg, A.B. 2023. Insights into animal carriage and pathogen surveillance in Latin America: The case of STEC and APEC. Book Chapter. p.149-175. https://doi.org/10.1007/978-3-031-29882-0_7.
Buffered peptone water promotes the transfer of antimicrobial resistance genes to Salmonella in swine cecal samples
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Short transportation did not impact circulating cortisol levels or leukocyte abundance in cattle
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Expression of short-chain fatty acid receptors and transporters in the porcine gastrointestinal tract
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Regional specialization of intraepithelial T cells and microbiota in the pig intestinal tract
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Annotating cell transcriptomes in four immune tissues to establish a porcine single-cell Immune Atlas
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Improving blood phenomics: ISU station report
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3’mRNA-Seq analysis of the effects of weaning and influenza infection on gene expression in whole blood of pigs
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Integrative profiling of gene expression and chromatin accessibility elucidates specific transcriptional networks in porcine neutrophils
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Characterization and applications of advanced regulatory element annotation in circulating porcine immune cells
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Definition of regulatory elements and transcription factors controlling immune cell gene expression at single cell resolution using single cell ATAC-Seq
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Effect of dietary ß-glucan on intestinal microbiota diversity and Salmonella vaccine immunogenicity and efficacy in pigs
- (Peer Reviewed Journal)
Loving, C.L., Bearson, S.M., Bearson, B.L., Kerr, B.J., Kiros, T.G., Shippy, D.C., Trachsel, J.M. 2022. Effect of dietary ß-glucan on intestinal microbiota diversity and Salmonella vaccine immunogenicity and efficacy in pigs. Veterinary Microbiology. 278. Article 109648. https://doi.org/10.1016/j.vetmic.2022.109648.
Intraepithelial lymphocytes in the pig intestine: T cell and innate lymphoid cell contributions to intestinal barrier immunity
- (Literature Review)
Wiarda, J.E., Loving, C.L. 2022. Intraepithelial lymphocytes in the pig intestine: T cell and innate lymphoid cell contributions to intestinal barrier immunity. Frontiers in Immunology. 13. Article 104708. https://doi.org/10.3389/fimmu.2022.1048708.
Phenotypic and genomic comparison of human outbreak and cattle-associated Escherichia coli O157:H7
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Intestinal location- and age-specific variation of intraepithelial T lymphocytes and mucosal microbiota in pigs
- (Peer Reviewed Journal)
Wiarda, J.E., Watkins, H.R., Gabler, N.K., Anderson, C.L., Loving, C.L. 2023. Intestinal location- and age-specific variation of intraepithelial T lymphocytes and mucosal microbiota in pigs. Developmental and Comparative Immunology. 139. Article 104590. https://doi.org/10.1016/j.dci.2022.104590.
Regional epithelial cell diversity in the small intestine of pigs
- (Peer Reviewed Journal)
Wiarda, J.E., Becker, S.R., Sivasankaran, S.K., Loving, C.L. 2022. Regional epithelial cell diversity in the small intestine of pigs. Journal of Animal Science. 101. Article eskac318. https://doi.org/10.1093/jas/skac318.
Intestinal single-cell atlas reveals novel lymphocytes in pigs with similarities to human cells
- (Peer Reviewed Journal)
Wiarda, J.E., Trachsel, J.M., Sivasankaran, S.K., Tuggle, C.K., Loving, C.L. 2022. Intestinal single-cell atlas reveals novel lymphocytes in pigs with similarities to human cells. Life Science Alliance. 5(10). Article e202201442. https://doi.org/10.26508/lsa.202201442.
Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits
- (Peer Reviewed Journal)
Corbett, R.J., Luttmann, A.M., Herrera-Uribe, J., Liu, H., Raney, N.E., Grabowski, J.M., Loving, C.L., Tuggle, C.K., Ernst, C.W. 2022. Assessment of DNA methylation in porcine immune cells reveals novel regulatory elements associated with cell-specific gene expression and immune capacity traits. Biomed Central (BMC) Genomics. 23(1). Article 575. https://doi.org/10.1186/s12864-022-08773-5.
Integration of epigenomic and transcriptomic data to identify regulatory elements and networks controlling immune cell-type gene expression in the pig
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Diversity of Alternative Splicing in Porcine Peripheral Blood Immune Cells
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A Bovine Rectoanal Junction-In vitro Organ Culture Model System to Study Shiga Toxin-Producing Escherichia coli Adherence
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Intravenous BCG induction of innate memory in young pigs
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Integrative Profiling of Gene Expression and Chromatin Accessibility Elucidates Specific Transcriptional Networks in Porcine Neutrophils
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The impact of carbadox on the swine intestinal microbiota and intraepithelial T cell populations post-weaning
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Converse trends with adaptive and innate immune responses following intravenous BCG inoculation in pigs
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AB5 Enterotoxin-Mediated Pathogenesis: Perspectives gleaned from Shiga toxins
- (Peer Reviewed Journal)
Biernbaum, E.N., Kudva, I.T. 2022. AB5 Enterotoxin-Mediated Pathogenesis: Perspectives gleaned from Shiga toxins. Toxins. 14(1). Article 62. https://doi.org/10.3390/toxins14010062.
Characterization of Two Novel Butyrate-Producing Species Isolated From Swine Feces
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Escherichia coli O157 differentially express proteins with a potential role in bacterial adaptation and survival in vivo in the rumen of cattle
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Kudva, I.T., Trachsel, J.M., Biernbaum, E.N., Lippolis, J.D. 2021. Escherichia coli O157 differentially express proteins with a potential role in bacterial adaptation and survival in vivo in the rumen of cattle. Meeting Abstract. https://www.abstractsonline.com/pp8/#!/9286/presentation/12063.