Location: Crop Improvement and Genetics Research
Publications
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CRISPR-Cas9 gene editing of the Sal1 gene family in wheat
- (Peer Reviewed Journal)
Mohr, T.J., Horstman, J.D., Gu, Y.Q., Elarabi, N.I., Abdallah, N.A., Thilmony, R.L. 2022. CRISPR-Cas9 gene editing of the Sal1 gene family in wheat. Plants. 11(17). Article 2259. https://doi.org/10.3390/plants11172259.
Tissue-specific expression of Ruby in Mexican lime (C. aurantiifolia) confers anthocyanin accumulation in fruit
- (Peer Reviewed Journal)
Thilmony, R.L., Dasgupta, K., Shao, M., Harris, D., Hartman, J., Harden, L.A., Chan, R., Thomson, J.G. 2022. Tissue-specific expression of Ruby in Mexican lime (C. aurantiifolia) confers anthocyanin accumulation in fruit. Frontiers in Plant Science. 13. Article 945738. https://doi.org/10.3389/fpls.2022.945738.
GrainGenes: A data-rich repository for small grains genetics and genomics
- (Peer Reviewed Journal)
Yao, E., Blake, V.C., Cooper, L., Wight, C.P., Michel, S., Cagirici, H.B., Lazo, G.R., Birkett, C., Waring, D.J., Jannink, J., Holmes, I., Waters, A.J., Eickholt, D.P., Sen, T.Z. 2022. GrainGenes: A data-rich repository for small grains genetics and genomics. Database: The Journal of Biological Databases and Curation. 2022. Article baac034. https://doi.org/10.1093/database/baac034.
Draft genome sequence of Agrobacterium fabrum strain 1D1104
- (Peer Reviewed Journal)
Huo, N., Gu, Y.Q., McCue, K.F., Alabed, D., Thomson, J.G. 2021. Draft genome sequence of Agrobacterium fabrum strain 1D1104. Microbiology Resource Announcements. 10(48). Article e00996-21. https://doi.org/10.1128/MRA.00996-21.
Gene assembly in agrobacterium via nucleic acid transfer using recombinase technology (GAANTRY)
- (Book / Chapter)
Hathwaik, L.T., Thomson, J.G., Thilmony, R.L. 2021. Gene assembly in agrobacterium via nucleic acid transfer using recombinase technology (GAANTRY). In: Bandyopadhyay, A., Thilmony, R.L, editors. Rice Genome Engineering and Gene Editing. Methods in Molecular Biology. New York, NY: Humana. p. 3-17.
Isolation of novel citrus and plum fruit promoters and their functional characterization for fruit biotechnology
- (Peer Reviewed Journal)
Dasgupta, K., Hotton, S., Belknap, W., Syed, Y., Dardick, C.D., Thilmony, R.L., Thomson, J.G. 2020. Isolation of novel citrus and plum fruit promoters and their functional characterization for fruit biotechnology. BioMed Central (BMC)Biotechnology. 20. https://doi.org/10.1186/s12896-020-00635-w.
Phenotypic examination of camelina sativa (L.) crantz accessions from the USDA – ARS National Genetics Resource Program
- (Peer Reviewed Journal)
Hotton, S., Kammerzell, M., Chan, R., Hernandez, B.T., Young, H.A., Tobias, C.M., Mckeon, T.A., Brichta, J.L., Thomson, N.J., Thomson, J.G. 2020. Phenotypic examination of camelina sativa (L.) crantz accessions from the USDA – ARS National Genetics Resource Program. Plants. 9(5). https://doi.org/10.3390/plants9050642.
Into the weeds: matching importation history to genetic consequences and pathways in two widely used biological control agents
- (Peer Reviewed Journal)
Hopper, J.V., McCue, K.F., Pratt, P.D., Duchesne, P., Grosholz, E.D., Hufbauer, R. 2019. Into the weeds: matching importation history to genetic consequences and pathways in two widely used biological control agents. Evolutionary Applications. 12(4):773-790. https://doi.org/10.1111/eva.12755.
Draft genome sequence of Agrobacterium tumefaciens strain 1D1526
- (Peer Reviewed Journal)
Huo, N., Gu, Y.Q., Mc Cue, K.F., Alabed, D., Thomson, J.G. 2019. Draft genome sequence of Agrobacterium tumefaciens strain 1D1526. Microbiology Resource Announcements. 8(45). https://doi.org/10.1128/MRA.01084-19.
Transgene stacking in potato using the GAANTRY system
- (Peer Reviewed Journal)
McCue, K.F., Gardner, E.B., Chan, R., Thilmony, R.L., Thomson, J.G. 2019. Transgene stacking in potato using the GAANTRY system. BMC Research Notes. 12:457. https://doi.org/10.1186/s13104-019-4493-8.
The Potato Association of America, a professional society for advancement of the potato industry
- (Abstract Only)
Draft genome sequence of serratia sp. 1D1416
- (Peer Reviewed Journal)
Alabed, D.F., Huo, N., Gu, Y.Q., McCue, K.F., Thomson, J.G. 2019. Draft genome sequence of serratia sp. 1D1416. Microbiology Resource Announcements. 8(3):e01354-18. https://doi.org/10.1128/MRA.01354-18.
RMCE methods of precise plant genome modification
- (Abstract Only)