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ARS Home » Midwest Area » West Lafayette, Indiana » Crop Production and Pest Control Research » Research » Research Project #432624

Research Project: Molecular Mechanisms of Host-Fungal Pathogen Interactions in Cereal Crops

Location: Crop Production and Pest Control Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Identifying Specificity Mechanisms in Zymoseptoria tritici in Host and Non-Host interactions - (Abstract Only)

The wheat pathogen Zymoseptoria tritici senses and responds to different wavelengths of light Reprint Icon - (Peer Reviewed Journal)
Mccorrison, C.B., Goodwin, S.B. 2020. The wheat pathogen Zymoseptoria tritici senses and responds to different wavelengths of light. BMC Genomics. 21, 513 (2020). https://doi.org/10.1186/s12864-020-06899-y.

Genetic Diversity and Population Structure of Zymoseptoria tritici in Ethiopia as Revealed by Microsatellite Markers Reprint Icon - (Peer Reviewed Journal)
Mekonnen, T., Haileselassie, T., Goodwin, S.B., Tesfayea, K. 2020. Genetic Diversity and Population Structure of Zymoseptoria tritici in Ethiopia as Revealed by Microsatellite Markers. Fungal Genetics and Biology. 141(2020):103413. https://doi.org/10.1016/j.fgb.2020.103413.

Draft genome sequence resource for Phyllachora maydis – an obligate pathogen that causes tar spot of corn with recent economic impacts in the United States - (Peer Reviewed Journal)

Real-time loop-mediated isothermal amplification assay for rapid and accurate detection of fungal pathogens of wheat - (Abstract Only)
Gomez, S.V., Goodwin, S.B. 2020. Real-time loop-mediated isothermal amplification assay for rapid and accurate detection of fungal pathogens of wheat. In: Proceedings of Plant Health 2020. August 8-12, 2020. Denver, Colorado.

The Arabidopsis proteins AtNHR2A and AtNHR2B are multifunctional proteins integrating plant immunity with other biological processes Reprint Icon - (Peer Reviewed Journal)
Singh, R., Liyanage, R., Gupta, C., Lay, J.O., Pereira, A., Rojas, C.M. 2020. The Arabidopsis proteins AtNHR2A and AtNHR2B are multifunctional proteins integrating plant immunity with other biological processes. Frontiers in Plant Science. 11:232. https://doi.org/10.3389/fpls.2020.00232.

Tar Spot, an emerging disease threatening corn production in the US - (Abstract Only)
Singh, R., Goodwin, S.B. 2020. Tar Spot, an emerging disease threatening corn production in the US. In: Proceedings of Indiana Science Communication Day, May 2, 2020, Indianapolis, Indiana.

101 Dothideomycetes genomes: a test case for predicting lifestyles and emergence of pathogens Reprint Icon - (Peer Reviewed Journal)
Haridas, S., Albert, R., Binder, M., Bloem, J., Labutti, K., Salamov, A., Andreopoulos, B., Baker, S.E., Barry, K., Bills, G., Bluhm, B.H., Cannon, C., Castanera, R., Culley, D.E., Daum, C., Ezra, D., Gonzalez, J.B., Henrissat, B., Inderbitzin, P., Kuo, A., Liang, C., Lipzen, A., Lutzoni, F., Magnuson, J., Mondo, S., Nolan, M., Ohm, R., Pangilinan, J., Park, H., Sanchez, M., Ramirez, L., Sun, H., Tritt, A., Yoshinaga, Y., Zwiers, L., Turgeon, B., Goodwin, S.B., Spatafora, J.W., Crous, P., Grigoriev, I.V. 2020. 101 Dothideomycetes genomes: a test case for predicting lifestyles and emergence of pathogens. Studies in Mycology. 96:141-153. https://doi.org/10.1016/j.simyco.2020.01.003.

Elucidating mechanisms of non-host resistance towards Septoria passerinii and Zymoseptoria tritici in wheat and barley - (Abstract Only)
Million, C.R., Crane, C.F., Goodwin, S.B. 2020. Elucidating mechanisms of non-host resistance towards Septoria passerinii and Zymoseptoria tritici in wheat and barley. Plant and Animal Genome Conference Proceedings. Jan 11-15, 2020, San Diego, CA.

Holistic genotyping of Amplicon panels with SPAdes and Blastn - (Abstract Only)
Crane, C.F., Crane, Y.M. 2020. Holistic genotyping of Amplicon panels with SPAdes and Blastn. Plant and Animal Genome XXVIII Conference Proceedings. January 11-15, 2020, San Diego, CA.

Megagametophyte differentiation in Zephyranthes drummondii D. Don and Zephyranthes chlorosolen (Herb.) D. Dietr. (Amaryllidaceae) Reprint Icon - (Peer Reviewed Journal)
Crane, C.F. 2019. Megagametophyte differentiation in Zephyranthes drummondii D. Don and Zephyranthes chlorosolen (Herb.) D. Dietr. (Amaryllidaceae). Caryologia. 72(4):105-119. https://doi.org/10.13128/caryologia-670.

Genome-scale data suggest an ancestral rock-inhabiting life-style of Dothideomycetes (Ascomycota) Reprint Icon - (Peer Reviewed Journal)
Ametrano, C.G., Grewe, F., Crous, P.W., Goodwin, S.B., Liang, C., Selbmann, L., Lumbsch, H., Leavitt, S.D., Muggia, L. 2019. Genome-scale data suggest an ancestral rock-inhabiting life-style of Dothideomycetes (Ascomycota). IMA Fungus. 10:19. https://doi.org/10.1186/s43008-019-0018-2.

Effect of light-sensing genes on growth and pathogenicity of Zymoseptoria tritici - (Abstract Only)
Mccorison, C.B., Goodwin, S.B. 2019. Effect of light-sensing genes on growth and pathogenicity of Zymoseptoria tritici. American Phytopathological Society Abstracts. August 3-7, 2019, Cleveland, OH.

Virus-induced gene silencing (VIGS) for functional characterization of disease resistance genes in barley seedlings Reprint Icon - (Peer Reviewed Journal)
Gunupuru, L.R., Perochon, A., Ali, S.S., Scofield, S.R., Doohan, F.M. 2018. Virus-induced gene silencing (VIGS) for functional characterization of disease resistance genes in barley seedlings. Methods in Molecular Biology. 1900:95-114. https://doi.org/10.1007/978-1-4939-8944-7_7.

How can we protect bananas? - (Popular Publication)
Arango Isaza, R.E., Diaz-Trujillo, C., Dhillon, B., Goodwin, S.B., Kema, G. 2018. How can we protect bananas? Biomedical Science Journal for Teens. Available: http://www.sciencejournalforkids.org/uploads/5/4/2/8/54289603/fungus_genome_article.pdf.

Septoria tritici blotch - (Book / Chapter)
Goodwin, S. B. 2018. Diseases affecting wheat: Septoria tritici blotch. Pages 47-68 in Integrated Disease Management of Wheat and Barley (R. P. Oliver, ed.). Burleigh Dodds Science Publishing, Cambridge, UK.

Mapping 1000000 markers with Flipper - (Abstract Only)
Crane, C.F. 2018. Mapping 1000000 markers with Flipper. Plant and Animal Genome Conference XXVI Proceedings. January, 13-17, 2018, San Diego, CA.

Improvements to the Flipper Genetic Mapper - (Abstract Only)
Crane, C.F. 2016. Improvements to the Flipper Genetic Mapper. Plant and Animal Genome Conference XXIV Proceedings. January 8-13, 2016, San Diego, CA.