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United States Department of Agriculture

Agricultural Research Service

Research Project: Genetics and Genomics of Complex Traits in Grain Crops

Location: Plant Genetics Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Genetic analysis of kernel traits in maize-teosinte introgression populations - (Peer reviewed journal)
Liu, Z., Garcia, A., McMullen, M., Flint Garcia, S.A. 2016. Genetic analysis of kernel traits in maize-teosinte introgression populations. G3, Genes/Genomes/Genetics. 6(8):2523-2530. doi: 10.1534/g3.116.030155/-/DC1.

MeSH-informed enrichment analysis and MeSH-guided semantic similarity among functional terms and gene products in chicken - (Peer reviewed journal)
Morota, G., Beissinger, T.M., Penagaricano, F. 2016. MeSH-informed enrichment analysis and MeSH-guided semantic similarity among functional terms and gene products in chicken. G3, Genes/Genomes/Genetics. 6(8):2447-2453. doi: 10.1534/g3.116.031096.

Metabolomic assessment of key maize resources: GC-MS and NMR profiling of grain from B73 hybrids of the nested association mapping (NAM) founders and of geographically diverse landraces - (Peer reviewed journal)
Venkatesh, T.V., Chassy, A., Fiehn, O., Flint Garcia, S.A., Zeng, Q., Skogerson, K., Harrigan, G.G. 2016. Metabolomic assessment of key maize resources: GC-MS and NMR profiling of grain from B73 hybrids of the nested association mapping (NAM) founders and of geographically diverse landraces. Journal of Agricultural and Food Chemistry. 64(10):2162-2172. doi: 10.1021/acs.jafc.5b04901.

Recent demography drives changes in linked selection across the maize genome Reprint Icon - (Peer reviewed journal)
Beissinger, T.M., Wang, L., Crosby, K., Durvasula, A., Hufford, M.B., Ross-Ibarra, J. 2016. Recent demography drives changes in linked selection across the maize genome. Nature Plants. doi:10.1038/nplants.2016.84.

Expanding maize genetic resources with predomestication alleles: maize-teosinte introgression populations Reprint Icon - (Peer reviewed journal)
Liu, Z., Cook, J., Melia-Hancock, S., Guill, K.E., Bottoms, C., Garcia, A., Ott, O., Nelson, R., Recker, J., Balint-Kurti, P.J., Larsson, S., Lepak, N.K., Buckler, E.S., Trimble, L., Tracy, W., McMullen, M.D., Flint-Garcia, S.A. 2016. Expanding maize genetic resources with predomestication alleles: maize-teosinte introgression populations. The Plant Genome. 9(1). doi:10.3835/plantgenome2015.07.0053.

The genomic impacts of drift and selection for hybrid performance in maize Reprint Icon - (Peer reviewed journal)
Gerke, J.P., Edwards, J.W., Guill, K.E., Ross-Ibarra, J., McMullen, M.D. 2015. The genomic impacts of drift and selection for hybrid performance in maize. Genetics. 201(1201-1211). doi: 10.1534/genetics.115.182410.

Compositional assessments of key maize populations: B73 hybrids of the nested association mapping founder lines and diverse landrace inbred lines Reprint Icon - (Peer reviewed journal)
Venkatesh, T.V., Harrigan, G.G., Perez, T., Flint-Garcia, S.A. 2015. Compositional assessments of key maize populations: B73 hybrids of the nested association mapping founder lines and diverse landrace inbred lines. Journal of Agricultural and Food Chemistry. 63:5282-5295.

The resurrection genome of Boea hygrometrica: A blueprint for survival of dehydration Reprint Icon - (Peer reviewed journal)
Xiao, L., Yang, G., Zhang, L., Yang, X., Zhao, S., Ji, Z., Zhou, Q., Hu, M., Oliver, M.J., He, Y., et.al 2015. The resurrection genome of Boea hygrometrica: A blueprint for survival of dehydration. Proceedings of the National Academy of Sciences. 112(18):5833-5837.

Why we need GMO crops in agriculture - (Review article)
Oliver, M.J. 2014. Why we need GMO crops in agriculture. Missouri Medicine. 111.6:493-507.

Hallauer’s Tusón: a decade of selection for tropical-to-temperate phenological adaptation in maize Reprint Icon - (Peer reviewed journal)
Teixeira, J.E., Weldekidan, T., de Leon, N., Flint Garcia, S.A., Holland, J.B., Lauter, N.C., Murray, S.C., Xu, W., Hessel, D., Kleintop, A.E., Hawk, J., Hallauer, A.R., Wisser, R. 2015. Hallauer’s Tusón: a decade of selection for tropical-to-temperate phenological adaptation in maize. Heredity. 114:229-240.

Insights into the effects of long-term artificial selection on seed size in maize Reprint Icon - (Peer reviewed journal)
Hirsch, C.N., Flint Garcia, S.A., Beissinger, T.M., Eichten, S.R., Deshpande, S., Barry, K., Mcmullen, M.D., Holland, J.B., Buckler IV, E.S., Springer, N., Buell, R.C., de Leon, N., Kaeppler, S.M. 2014. Insights into the effects of long-term artificial selection on seed size in maize. Genetics. 198(1):409-421.

BC4GO: a full-text corpus for the BioCreative IV GO Task Reprint Icon - (Peer reviewed journal)
Van Auken, K., Schaeffer, M.L., McQuilton, P., Laulederkind, S.J., Li, D., Wang, S., Hayman, G., Tweedie, S., Arighi, C.N., Done, J., et al. 2014. BC4GO: a full-text corpus for the BioCreative IV GO Task. Database: The Journal of Biological Databases and Curation. 2014:1-9. Available: http://database.oxfordjournals.org/content/2014/bau074

Plant water relations II: how plants manage water deficit and why it matters - (Review article)
Williams, M., Oliver, M.J., Pallardy, S.G. 2014. Plant water relations II: how plants manage water deficit and why it matters. The Plant Cell. 26(4):1-15.

Plant water relations I: uptake and transport - (Review article)
Williams, M., Oliver, M.J., Pallardy, S.G. 2014. Plant water relations I: uptake and transport. The Plant Cell. 26:1.

Maize databases - (Book / chapter)
Schaeffer, M.L., Sen, T.Z., Lawrence, C.J. 2014. Maize databases. In: Wusirika, R., Bohn, M., Lai, J., Kole, C., editors. Genetics, Genomics and Breeding of Maize. Boca Raton, FL: CRC Press. p. 215-235.

The genetic architecture of maize height Reprint Icon - (Peer reviewed journal)
Peiffer, J.A., Romay, M.C., Gore, M.A., Flint Garcia, S.A., Zhang, Z., Millard, M.J., Gardner, C.A., McMullen, M.D., Holland, J.B., Bradbury, P., Buckler IV, E.S. 2014. The genetic architecture of maize height. Genetics. 196:1337-1356.

Last Modified: 2/23/2016
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