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United States Department of Agriculture

Agricultural Research Service

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Location: Plant Stress and Germplasm Development Research

2011 Annual Report

1a. Objectives (from AD-416)
(1) To characterize selected germplasm lines of sorhgum for response to cold stress at early season and other specified stages of development. (2) To identify additional germplasm resources for enhanced cold tolerance breeding programs in different types of sorghums. (3) To assemble phenotypic and DNA marker information that can be applied towards accelerated development of cold-tolerant sorghum germplasm.

1b. Approach (from AD-416)
An evaluation of cold tolerance responses across four locations within the U.S. grain sorghum belt will be performed in this study. Analysis using Quantitative trait loci (QTL) mapping of the BTx623 x PI567946 RIL population multi-location data will be performed to identify genome regions associated with enhanced early season cold tolerance. Determination of effective means of hybrid development for grain sorghum will be conducted through the analysis of F1 hybrids between three sterile versions of Chinese sources of cold tolerance and three elite US A/B lines. Additional new sets of germplasm from China (Stillwater investigator's accessions), the highlands of Sudan (and Ethiopia), and novel mutant lines of BTx 623 will be characterized for their cold tolerance at early stages and at grain filling stages. Detailed study of cold-tolerant lines will be conducted by characterizing disease reactions of sorghum to various seedling pathogens and through studies of linkage drag with other traits such as the association of cold tolerance with colored testa. At the end of various studies, all data will be assembled and analyzed statistically to (1) identify new germplasm of sorghums (eg; landraces and mutant lines) that can be used sources of cold tolerance for various applications, (2) gather genetic data on inheritance of cold tolerance in hybrids and the relative contribution of maternal effects to serve as guide in variety development; and (3) pinpoint DNA marker and phenotypic information that can applied for development of cold tolerant sorghum germplasm.

3. Progress Report
This project was formally started in January 2011, and to date has led to identification of five Chinese germplasms as sources of early season cold tolerance for grain sorghum application. Furthermore, four accessions from the Sudan/Ethiopian collection were identified as germplasm sources for biomass application. Characterization of ten AIMS (Annotated Individually mutagenized sorghum) mutant lines as novel sources of early season cold tolerance has been initiated. An in-depth study using next generation sequencing technology of transcriptome of the cold-tolerant accession PI567946 is in progress to elucidate the molecular basis of cold tolerance in this germplasm resource. Multidisciplinary approaches involving breeding/genetics, agronomy, and pathology/entomology are being launched as part of the implementation of this project.

4. Accomplishments

Last Modified: 06/23/2017
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