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United States Department of Agriculture

Agricultural Research Service

Plant Pathogen Biology & Biosystematics
item Hyperspectral imaging to identify salt-tolerant wheat lines (Sep 2017)
item Rathayibacter toxicus: how a bacterium hitches a ride on a nematode to invade grass seeds and produce a toxin harmful to livestock (Sep 2017)
item Importance of resolving fungal nomenclature: the case of multiple pathogenic species in the Cryptococcus genus (Aug 2017)
item Discovery of a novel stem rust resistance allele in durum wheat that exhibits differential reactions to Ug99 isolates (Aug 2017)
item Molecular mechanisms behind the accumulation of adenosine triphosphate (ATP) and H2O2 in citrus plants in response to ‘Candidatus Liberibacter asiaticus’ infection (Aug 2017)
item Proposals to conserve Pyrenophora japonica (Drechslera japonica), Pyrenophora lolii, and Pleosphaeria seminiperda (Pyrenophora seminiperda) (Ascomycota, Dothideomycetes, Pleosporales) (Aug 2017)
item ICTV Virus Taxonomy Profile: Virgaviridae (Aug 2017)
item Genome-wide associations for water-soluble carbohydrate concentration and relative maturity in wheat using SNP and DArT marker arrays (Aug 2017)
item Wheat rusts in the United States in 2016 (Jul 2017)
item p22 of Tomato chlorosis virus, an RNA silencing suppressor, is naturally expressed in the infected plant (Jul 2017)
item First report of tomato chlorotic spot virus in sweet basil (Ocimum basilicum) and purslane (Portulaca oleracea) in Florida (Jul 2017)
item Tomato chlorotic spot virus Identified in Marsdenia floribunda in Florida (Jul 2017)
item Multi-locus mixed model analysis of stem rust resistance in a worldwide collection of winter wheat (Jun 2017)
item Proposals to conserve the names Balansia claviceps against Ephelis mexicana,……,and Tolypocladium inflatum against Cordyceps subsessilis (Ascomycota: Sordariomycetes: Hypocreales) (Jun 2017)
item Proposals to conserve Botryodiplodia theobromae (Lasiodiplodia theobromae) against Sphaeria glandicola, .....Ramularia brunnea against Sphaerella tussilaginis (Mycosphaerella tussilaginis) (Ascomycota: Dothideomycetes) (Jun 2017)
item Host-mediated effects of semipersistently transmitted Squash vein yellowing virus on sweetpotato whitefly (Hemiptera: Aleyrodidae) behavior and fitness (Jun 2017)
item Using small RNA deep sequencing data to detect siRNA duplexes induced by plant viruses (Jun 2017)
item Streptomyces asenjonii sp. nov., isolated from arid Atacama Desert soils and emended description of Streptomyces viridosporus Pridham et al. 1958 (Jun 2017)
item Enhancing genomic prediction with genome-wide association studies in multiparental maize populations (Jun 2017)
item Squash vein yellowing virus (Jun 2017)
item Cucumber vein yellowing virus (Jun 2017)
item First report of citrus leaf blotch virus in lemon in China (May 2017)
item Proposals to conserve the names Chaetomium piluliferum (Botryotrichum piluliferum) against ……and Gnomonia intermedia (Ophiognomonia intermedia) against Gloeosporium betulae (Discula betulae) (Ascomycota: Sordariomycetes) (May 2017)
item Hijacked: Co-option of host behavior by entomophthoralean fungi (May 2017)
item Genome sequence and physiological analysis of Yamadazyma laniorum f.a. sp. nov. and a reevaluation of the apocryphal xylose fermentation of its sister species, Candida tenuis (May 2017)
item Use of chemical flocculation and nested PCR for Heterodera glycines detection in DNA extracts from field soils with low population densities (Apr 2017)
item DP 18: Anguina spp. (Apr 2017)
item Identification of Teosinte (Zea mays ssp. parviglumis) alleles for resistance to southern leaf blight in near isogenic maize lines (Apr 2017)
item Identification of a new species of Aphis (Hemiptera: Aphididae) based on distinct morphology (Mar 2017)
item Fine mapping of a quantitative resistance gene for gray leaf spot of maize (Zea mays L.) derived from teosinte (Z. mays ssp. parviglumis) (Mar 2017)
item Which morel is this? (Mar 2017)
item Development of real-time and conventional PCR assays for identifying stubby root nematode Paratrichodorus allius (Mar 2017)
item Development and validation of polymorphic microsatellite loci for the NA2 lineage of Phytophthora ramorum from whole genome sequence data (Mar 2017)
item Genetic dissection of the maize (Zea mays L.) MAMP response (Mar 2017)
item Quantitative disease resistance: dissection and adoption in maize (Mar 2017)
item Streptomyces aridus sp. nov., isolated from a high altitude Atacama Desert soil and emended description of Streptomyces noboritoensis Isono et al. 1957 (Feb 2017)
item Population extremes for assessing trait value and correlated response of genetically complex traits (Feb 2017)
item Fusarium agapanthi sp. nov, a novel bikaverin and fusarubin-producing leaf and stem spot pathogen of Agapanthus praecox (African lily) from Australia and Italy (Jan 2017)
item Multilocus phylogeny and antifungal susceptibility of Aspergillus section Circumdati from clinical samples and description of A. pseudosclerotiorum sp. nov. (Jan 2017)
item High-Throughput resequencing of maize landraces at genomic regions associated with flowering time (Jan 2017)
item Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis (Dec 2016)
item Modifications to a LATE MERISTEM IDENTITY-1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.) (Dec 2016)
item Draft Genome Sequences of Historical Listeria monocytogenes from Human Listeriosis, 1933 (Dec 2016)
item Reconstructing the backbone of the Saccharomycotina yeast phylogeny using genome-scale data (Dec 2016)
item Overlooked competing asexual and sexually typified generic names of Ascomycota with recommendations for their use or protection (Nov 2016)
item Genetic mapping of stem rust resistance to Puccinia graminis f. sp. tritici race TRTTF in the Canadian wheat cultivar 'Harvest' (Nov 2016)
item Veterinary Fusarioses within the United States (Nov 2016)
item in silico Whole Genome Sequencer & Analyzer (iWGS): a computational pipeline to guide the design and analysis of de novo genome sequencing studies (Nov 2016)
item The genetics of leaf flecking in maize and its relationship to plant defense and disease resistance (Nov 2016)
item A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data (Oct 2016)
item Invasive Asian Fusarium – Euwallacea ambrosia beetle mutualists pose a serious threat to forests, urban landscapes and the avocado industry (Oct 2016)
item Taxonomic evaluation of species in the Streptomyces hirsutus clade using multi-locus sequence analysis and proposals to reclassify several species in this clade (Oct 2016)
item Evolution of the Fusarium–Euwallacea ambrosia beetle mutualism (Sep 2016)
item Genetic architecture of domestication-related traits in maize (Sep 2016)
item Comparative genomics of biotechnologically important yeasts (Aug 2016)
item Isolation and characterization of an atypical Listeria monocytogenes associated with a canine urinary tract infection (Aug 2016)
item Identification of highly variable supernumerary chromosome segments in an asexual pathogen (Aug 2016)
item Four new morel (Morchella) species in the Elata Subclade (sect. Distantes) from Turkey (Aug 2016)
item Two novel Fusarium species that cause canker disease of Sichuan pepper (Zanthoxylum bungeanum Maxim.) in northern China form a novel clade with F. torreyae (Aug 2016)
item Paecilomyces tabacinus (Jul 2016)
item Rasamsonia columbiensis (Jul 2016)
item Semi-automated confocal imaging of fungal pathogenesis on plants: microscopic analysis of macroscopic specimens (Jul 2016)
item Haenamindole and fumiquinazoline analogs from a fungicolous isolate of Penicillium lanosum (Jun 2016)
item Taxonomic evaluation of unidentified Streptomyces isolates in the ARS Culture Collection (NRRL) using multi-locus sequence analysis (Jun 2016)
item Proposal to conserve the name Discula (Gnomoniaceae, Diaporthales) with a conserved type (May 2016)
item Description of Groenewaldozyma gen. nov. for placement of Candida auringiensis, Candida salmanticensis and Candida tartarivorans (May 2016)
item Maize homologs of CCoAOMT and HCT, two key enzymes in lignin biosynthesis, form complexes with the NLR Rp1 protein to modulate the defense response (Apr 2016)
item A genome-wide association study for partial resistance to maize common rust (Mar 2016)
item Building the tree of life from scratch: an end-to-end work flow for phylogenomic studies (Mar 2016)
item The making of biodiversity across the yeast subphyllum (Mar 2016)
item Update: Our morels are named! (Feb 2016)
item Social wasps promote social behavior in Saccharomyces spp. (Feb 2016)
item Analysis of genetic diversity of Fusarium tupiense, the main causal agent of mango malformation disease in southern Spain (Feb 2016)
item New combinations of plant-associated fungi resulting from the change to one name for fungi (Jan 2016)
item Aspergillus asper sp.nov. and Aspergillus collinsii sp.nov., from Aspergillus section Usti (Jan 2016)
item Taxonomic evaluation of putative Streptomyces scabiei strains held in the ARS (NRRL) Culture Collection using multi-locus sequence analysis (Jan 2016)
item Identification of alleles conferring resistance to gray leaf spot in maize derived from its wild progenitor species teosinte (Zea mays ssp. parviglumis) (Jan 2016)
item Responses to recurrent index selection for reduced fusarium ear rot and lodging and for increased yield in maize (Dec 2015)
item Genomics and the making of yeast biodiversity (Dec 2015)
item A Taqman real-time PCR assay for detection of Meloidogyne hapla in root galls and in soil (Nov 2015)
item Identification of food and beverage spoilage yeasts from DNA sequence analyses (Nov 2015)
item Two new species of true morels from Newfoundland and Labrador: cosmopolitan Morchella eohespera and parochial M. laurentiana (Nov 2015)
item Charles W. Stuber: Maize geneticist and pioneer of marker-assisted selection (Nov 2015)
item Avellanin C, an inhibitor of quorum-sensing signaling in Staphylococcus aureus, from Hamigera ingelheimensis (Nov 2015)
item Ensemble learning of QTL models improves prediction of complex traits (Oct 2015)
item Taxonomic concepts and practice with complex microbial communities (Oct 2015)
item Metabolic profiles of soybean roots during early stages of Fusarium tucumaniae infection (Oct 2015)
item Discovery of phosphonic acid natural products by mining the genomes of 10,000 actinomycetes (Sep 2015)
item Association of the symbiotic fungi Fusarium euwallaceae, Graphium sp. and Acremonium sp., with the ambrosia beetle Euwallacea nr. fornicatus in avocado (Sep 2015)
item Comparative genomics of biotechnologically important yeasts (Sep 2015)
item Maize homologs of HCT, a key enzyme in lignin biosynthesis, bind the NLR Rp1 proteins to modulate the defense response (Sep 2015)
item MAGIC Maize: A new resource for plant genetics (Sep 2015)
item Advances in yeast systematics and phylogeny and their use as predictors of biotechnologically important metabolic pathways (Sep 2015)
item Cytoplasmic and nuclear localizations are important for the hypersensitive response conferred by maize autoactive Rp1-D21 protein (Sep 2015)
item The genetic basis of flecking and its relationship to disease resistance in the IBM maize mapping population (Aug 2015)
item Phylogenomics of zygomycete fungi: impacts on a phylogenetic classification of Kingdom Fungi (Jul 2015)
item Description of Martiniozyma gen. nov. and transfer of seven Candida species to Saturnispora as new combinations (Jul 2015)
item Recommendations of generic names in Diaporthales competing for protection or use (Jun 2015)
item Saccharomyces cerevisiae colonization associated with fecal microbiota treatment failure (Jun 2015)
item Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population (Jun 2015)
item Cyberlindnera xylolytica sp. nov., a xylitol-producing yeast species isolated from lignocellulosic materials (May 2015)
item Real-time-PCR for detection and identification of Anguina funesta, A. agrostis, A. tritici, and A. pacificae (May 2015)
item Comparative features of sixteen yeast genomes having significant biotechnological interest (Apr 2015)
item Saccharomycotina and Taphrinomycotina – progress in circumscription of genera (Apr 2015)
item Phylogenetic assessment of Pezizomycetes (Apr 2015)
item Name changes in medically important fungi and their implications for clinical practice (Apr 2015)
item Registration of the Ki14 × B73 recombinant inbred mapping population of maize (Mar 2015)
item Genomic evolution of the ascomycetous yeasts (Mar 2015)
item Biology of two species of Microcera associated with armoured scales on citrus in Australia (Mar 2015)
item QTL mapping using high-throughput sequencing (Mar 2015)
item True morels (Morchella, Pezizales) of Europe and North America: evolutionary relationships inferred from multilocus data and a unified taxonomy (Mar 2015)
item Molecular and functional analyses of a maize autoactive NB-LRR protein identify precise structural requirements for activity (Feb 2015)
item Fusarium and other opportunistic hyaline fungi (Feb 2015)
item Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel (Feb 2015)
item New insight into a complex plant-fungal pathogen interaction (Jan 2015)
item Revision of Aspergillus section Flavipedes: seven new species and proposal of section Jani sect. nov. (Jan 2015)
item A web-based genomic sequence database for the Streptomycetaceae: a tool for systematics and genome mining (Jan 2015)
item Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection (Dec 2014)
item Meeting report: 2nd workshop of the United States culture collection network (May 19-21, 2014, State College, PA, USA) (Dec 2014)
item Limits on the reproducibility of marker associations with southern leaf blight resistance in the maize nested association mapping population (Dec 2014)
item The Order Pseudonocardiales (Dec 2014)
item Discordant phylogenies suggest repeated host shifts in the Fusarium–Euwallacea ambrosia beetle mutualism (Nov 2014)
item Description of Kuraishia piskuri f.a., sp. nov., a new methanol assimilating yeast and transfer of phylogenetically related Candida species to the genera Kuraishia and Nakazawaea as new combinations (Nov 2014)
item First report of mango malformation disease caused by Fusarium pseudocircinatum in Mexico (Oct 2014)
item A roadmap for natural product discovery based on large-scale genomics and metabolomics (Sep 2014)
item Living on the edge: disease, population decline, and conservation efforts of the Florida Torreya (Sep 2014)
item Molecular comparisons for identification of food spoilage yeasts and prediction of species that may develop in different food products (Sep 2014)
item A genome-wide association study of the maize hypersensitive defense response identifies genes that cluster in related pathways (Aug 2014)
item Acute respiratory distress caused by Neosartorya udagawae (Aug 2014)
item Genetic relatedness versus biological compatibility between Aspergillus fumigatus and related species (Aug 2014)
item Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains (Aug 2014)
item Taxonomic evaluation of Streptomyces hirsutus and related species using multi-locus sequence analysis (Aug 2014)
item Nitrogen stress reduces fungal pathogen symptoms and dampens the correlation between disease and early-season bacterial epiphyte diversity in maize (Jul 2014)
item Discovery of novel phosphonate natural products and their biosynthetic pathways by large-scale genome mining (Jul 2014)
item Aspergillus pragensis sp. nov. discovered during molecular reidentification of clinical isolates belonging to Aspergillus section Candidi (Jul 2014)
item Clinical, morphological, and molecular characterization of Penicillium canis, sp. nov., isolated from a dog with osteomyelitis (Jul 2014)
item Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi (Jul 2014)
item On the reclassification of species assigned to Candida and other anamorphic ascomycetous yeast genera based on phylogenetic circumscription (Jul 2014)
item (2289) Proposal to conserve the name Morchella semilibera against Phallus crassipes, P. gigas and P. undosus (Ascomycota) (Jun 2014)
item Fusarium euwallaceae, a novel species cultivated by a Euwallacea ambrosia beetle that threatens avocado production in Israel and California (Jun 2014)
item Phylogenetic diversity and fidelity of the Euwallacea (Coleoptera: Xyleborini) - Fusarium mutualism (Jun 2014)
item Evolutionary history of Ascomyceteous Yeasts (Jun 2014)
item Living on the edge: disease, population decline and conservation efforts of the Florida torreya (Torreya taxifolia)" (May 2014)
item Update on the status of NRRL (May 2014)
item Three new anascosporic genera of the Saccharomycotina: Danielozyma gen. nov., Deakozyma gen. nov. and Middelhovenomyces gen. nov. (May 2014)
item Streptomyces leeuwenhoekii sp. nov., the producer of chaxalactins and chaxamycins, forms a distinct branch in Streptomyces gene trees (May 2014)
item Clonality, recombination, and hybridization in the plumbing-inhabiting human pathogen Fusarium keratoplasticum inferred from multilocus sequence typing (Apr 2014)
item Phylogenomics of the Zygomycete lineages: Exploring phylogeny and genome evolution (Mar 2014)
item Taxonomic evaluation of Streptomyces albus and related species using multilocus sequence analysis and proposals to emend the description of Streptomyces albus and describe Streptomyces pathocidini sp. nov (Mar 2014)
item How does the phylogenetic species concept correlate with biological characteristics of the pathogenic species in Aspergillus section Fumigati? (Mar 2014)
item A preliminary assessment of the true morels (Morchella) in Newfoundland and Labrador (Feb 2014)
item Mel-36 – preliminary description of a new morel species (Feb 2014)
item Morel species Mel-19 – preliminary report (Feb 2014)
item Use of gene sequence analyses and genome comparisons for yeast systematics (Feb 2014)
item Yield effecgs of two southern leaf blight resistance loci in maize hybrids (Jan 2014)
item Proposal to conserve the name Helminthosporium maydis Y. Nisik. & C. Miyake (Bipolaris maydis) against H. maydis Brond. and Ophiobolus heterostrophus (Ascomycota: Pleosporales: Pleosporaceae) (Dec 2013)
item Proposal to conserve the name Bipolaris against Cochliobolus (Ascomycota: Pleosporales: Pleosporaceae) (Dec 2013)
item Diversity and abundance of phosphonate biosynthetic genes in nature (Dec 2013)
item Occurrence of Meloidogyne fallax in North America, and molecular characterization of M. fallax and M. minor from U.S. golf course greens (Nov 2013)
item A genome-wide association study reveals genes associated with fusarium ear rot resistance in a maize core diversity panel (Nov 2013)
item Description of Ambrosiozyma oregonensis sp. nov., and reassignment of Candida species of the Ambrosiozyma clade to Ambrosiozyma kashinagacola f.a., comb. nov., Ambrosiozyma llanquihuensis f.a., comb. nov., etc. (Oct 2013)
item ICY 2012 Highlights (Aug 2013)
item Proposal to conserve the name Phomopsis citri H.S. Fawc. (Diaporthe citri), with a conserved type, against Phomopsis citri (Sacc.) Traverso & Spessa (Ascomycota, Diaporthales, Diaporthaceae) (Jun 2013)
item Impacts of the International Code of Nomenclature for algae, fungi and plants (Melbourne Code) on the scientific names of plant pathogenic fungi (Jun 2013)
item Ambrosia beetle fungiculture (Jun 2013)
item The impact of culture collections on molecular identification, taxonomy, and solving real problems (May 2013)
item The ARS Culture Collection and Developments in Biotechnology (May 2013)
item Data management and database structure at the ARS Culture Collection (May 2013)
item Overview of the ARS Culture Collection (May 2013)
item Culture Collections and Public Health Research (May 2013)
Last Modified: 10/16/2017
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