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Plant Genome Mapping
item First genome and transcription factor profile for Asimina triloba, a native North American fruit tree (Mar 2026)
item High Nighttime Temperature (HNT)-responsive MicroRNA profiles in developing Caryopses and flag leaves of 13 rice varieties (Feb 2026)
item Genome-wide association study and RNA sequencing identify candidate genes regulating nitrogen use efficiency and associated traits in sorghum (Sorghum bicolor (L.) Moench) (Feb 2026)
item Haplotype-phased genomes elucidate genetic architecture of environmental adaptation and domestication traits in Silphium (Feb 2026)
item Characterization and multivariate analysis of engineering properties of red sunflower seed weevil-infested achenes (Feb 2026)
item QTL mapping of oat crown rust resistance in Australian fields and identification of a seedling resistance locus in oat line GS7 (Jan 2026)
item Effectiveness of low-density high-throughput marker platform and easy-to-measure traits for genomic prediction for biomass yield improvement in oat (Avena sativa L.). (Jan 2026)
item SorghumBase as a Knowledgebase for Sorghum Genomic Data and Community Interaction (Jan 2026)
item Sorghum Pan-genomic Resources Reveal Novel Genetic Networks for Trait Discovery (Jan 2026)
item Development of diagnostic markers for Lr53, Lr56, and Lr59 to facilitate deployment of leaf rust resistance in wheat (Jan 2026)
item High-quality T2T genomes of spring wheat cultivars Boost and Timstein provide cultivar-resolved frameworks for wheat disease resistance genetics (Jan 2026)
item Developing FAIR open-source interactive web browsers for individual labs to explore single-cell data: Shiny-PIGGI as an example from the AgBioData Single Cell Working Group. (Jan 2026)
item SorghumBase as a Knowledgebase for Sorghum Genomic Data and Community Interaction (Jan 2026)
item Quantitative trait loci (QTLs) mapping for drought stress tolerance using chromosomal substitution lines and recombinant inbred lines (RILs) in durum wheat (Jan 2026)
item Field evaluation of spring wheat varieties and breeding lines to Fusarium head blight infection and mycotoxin accumulation in southeast Idaho (Jan 2026)
item Navigating rice seedling cold resilience in the Aus and Tropical Japonica Subpopulations: QTL Mapping and the search for genes (Jan 2026)
item Identification of Halo Blight disease on oat in Idaho and exploration of resistant sources in oat, barley and wheat (Jan 2026)
item Genome-wide association study for early morning flowering trait in the AUS rice diversity panel (Jan 2026)
item Assessing the response of Tropical Japonica accessions under alternate-wetting-drying conditions through hyperspectral analysis (Jan 2026)
item Screening Arkansas rice cultivars for resistance to leaf blast (Jan 2026)
item Elucidating the role of seeds as primary inoculum of Pantoea ananatis in rice production (Jan 2026)
item Two-Year studies of raising fish in rice fields in Arkansas (Jan 2026)
item Identification of useful genomic regions in a Tropical Japonica Core collection for U.S. rice breeding programs (Jan 2026)
item Identification of Blast QTL in a Presidio/Oryza rufipogon rice advanced backcross population (Jan 2026)
item The Genetic Stocks Oryza (GSOR) Germplasm Collection (Jan 2026)
item Plant biomass estimations with minimal equipment using deep learning-based image segmentation (Jan 2026)
item Identification of rice genes involved in chalkiness, seed traits and disease resistance (Jan 2026)
item Prevalence of blast and quality genes and traits in the Uniform Regional Rice Nursery (URRN) (Jan 2026)
item Managing As and Cd simultaneously by irrigation management without compromising grain yield, nutritional or processing qualities (Jan 2026)
item Uncovering hidden introgressions: optimizing breeding strategies in US long-grain rice (Jan 2026)
item Integration of host genetic resistance and fungicides to control Cercospora in rice (Jan 2026)
item Screening Arkansas rice cultivars for resistance to Leaf Blast (Jan 2026)
item Visions of Dale Bumpers National Rice Research Center (Jan 2026)
item Screening the Presidio/Oryza rufipogon rice advanced backcross population for reaction to leaf blast disease using two techniques (Jan 2026)
item Plant pathology challenges in Arkansas: Blast and Cercospora (Jan 2026)
item Improved reannotations of Aegilops umbellulata (PI 554389) genome and transcriptomics data provides candidates for leaf rust resistance for wheat improvement (Dec 2025)
item Understanding genetic architecture overcomes tradeoffs between seed quality and insect resistance (Dec 2025)
item A single hybrid origin of cultivated peanut (Dec 2025)
item Evaluation of seed treatments for the management of Rhizoctonia solani seedling disease in rice fields in Arkansas, 2023. (Dec 2025)
item Efficacy of seed treatments for control of Rhizoctonia solani seedling disease in rice in Arkansas, 2024. (Dec 2025)
item Genotype selection and microbial partnerships influence chickpea establishment in lunar regolith simulant (Dec 2025)
item Gramene 2025: expanded comparative genomics resources, integrated search, and pan-genome portals for crop research (Dec 2025)
item Genetic mapping of a chickpea (Cicer arietinum L.) diversity panel for mineral biofortification towards human nutrition (Nov 2025)
item High-Resolution introgression mapping of rice chromosome segment substitution lines (CSSLs) using skim sequencing (Nov 2025)
item Genome-Wide Association Study for drought response traits in a diverse tropical japonica rice panel (Nov 2025)
item All-in-one machine learning framework for early detection and characterization of sugar beet diseases using hyperspectral imaging (Nov 2025)
item Propagating rsIDs Across Crop Pan-Genomes in Gramene Platform Using the Ensembl Variant Remapping Pipeline (Nov 2025)
item Visualizing Functional Divergence and Conservation in Gene Families with TBrowse (Nov 2025)
item A pangenome and pantranscriptome of hexaploid oat (Oct 2025)
item A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat (Sep 2025)
item Phenotypic data on seedling traits of hexaploid spring wheat panel evaluated under heat stress (Sep 2025)
item Identification of a major rice blast quantitative trait Loci containing Pita/Pi39(t)/Ptr in USA Blackhull Awn Weedy Rice (Sep 2025)
item Above-and below-ground microenvironmental attributes cluster to varying degrees around Wyoming Big Sagebrush canopies (Sep 2025)
item Genetic gains in durum wheat (Triticum turgidum ssp. durum) across the globe: yield, quality, and adapting for variable weather patterns (Sep 2025)
item Complex reticulation in backbone subfamily relationships in Leguminosae (Sep 2025)
item The Need for Robust, FAIR Phenomic Databases Supporting Agricultural Efficiency and Resiliency (Aug 2025)
item Evaluation of long grain advanced breeding lines for genetic tolerance to reduced irrigation (Aug 2025)
item Unifying Rice Diversity: The GrameneOryza 2025 Pan-Genome Platform for Research and Community Engagement (Aug 2025)
item Improving genomic prediction for plant disease using environmental covariates (Aug 2025)
item Comparative analysis of genomic selection models for trait improvement in Arkansas rice varieties (Aug 2025)
item Cytonuclear analysis of barley spike traits using a cytoplasm-aware population (Aug 2025)
item Genetic basis of phenotypic diversity in Coffea stenophylla: a stepping stone for climate-adapted coffee cultivar development (Aug 2025)
item Genetic confirmation of postulated Sr genes transferred to Rusty monogenic lines (Aug 2025)
item Vibrio cholerae integrates interspecies quorum-sensing signals to regulate virulence (Jul 2025)
item Data for: Chromosome-level haplotype-resolved genome assemblies and annotations of Apios americana and Apios priceana (Jul 2025)
item SorghumBase is a Knowledgebase for Sorghum Genomic Data and Community Interaction (Jul 2025)
item Structural variability of Pfam domains based on alphafold2 predictions (Jul 2025)
item Nitrogen status of mixed clover and Kentucky bluegrass dicultures in a greenhouse setting (Jul 2025)
item Comparative genome-wide characterization and evolutionary insights into the AP2/ERF gene family in three Coffea species (C. canephora, C. eugenioides, and C. arabica) (Jul 2025)
item Genome-wide characterization of invertases in Arabica coffee and its progenitors reveals putative genes involved in fruit development (Jul 2025)
item Primary investigation of rice-fish co-culture: Investigating the feasibility of raising fish in flooded rice paddies in the Southern USA (Jul 2025)
item Understanding the genetic basis of heat stress tolerance in wheat (Triticum aestivum L.) through genome-wide association studies (Jul 2025)
item Registration of 'USDA-Basin' and 'USDA-Wasatch' bluebunch wheatgrass, originating from and adapted to the Central Great Basin of the western USA (Jul 2025)
item New threats to rice production: emerging pathogens and their impact (Jul 2025)
item Regulation of arsenic methylation and demethylation dynamics by organic carbon in rice paddy soil (Jul 2025)
item Why do some predicted protein structures fold poorly? Benchmarking AlphaFold, ESMFold, and Boltz in maize (Jul 2025)
item Assessing genetic redundancy and diversity in Colombian cacao germplasm collections using SNP fingerprinting (Jul 2025)
item Genetic analysis of the single internode dwarf 1 mutant in barley (Jul 2025)
item Identification and molecular mapping of two quantitative trait loci for Hessian fly resistance in a durum × cultivated emmer wheat population (Jul 2025)
item Development of diagnostic markers for the disease susceptibility gene Tsn1 in wheat reveals novel resistance alleles and a new locus required for ToxA sensitivity (Jun 2025)
item Data from: Identification and molecular mapping of two quantitative trait loci for Hessian fly resistance in a durum × cultivated emmer wheat population (Jun 2025)
item Registration of six Oryza rufipogon Species Complex (ORSC) chromosome segment substitution sine (CSSL) libraries in elite Indica and Japonica rice backgrounds (Jun 2025)
item Fructan biosynthesis gene expression upon cold acclimation in orchardgrass (Dactylis glomerata L.) (Jun 2025)
item Phenotypic data related to seedling traits of hexaploid spring wheat panel evaluated under salinity (Jun 2025)
item Grazing intensities regulated the effects of seasonal dietary pattern on gut bacterial community composition of sheep (Jun 2025)
item Effect of soil amendments on grain yield, yield components, and milling qualities in organic rice production (Jun 2025)
item Wild bee visitation unaffected by disparate nectar phenotypes in a sunflower inbred line population (Jun 2025)
item Environmental data provide marginal benefit for predicting climate adaptation. (Jun 2025)
item Influence of genotype and environment on field pea composition and milling traits (Jun 2025)
item Fourier-transform mid-infrared spectroscopy for high-throughput phenotyping of total dietary fiber in pulse crops (Jun 2025)
item Out of Africa: tracing the genomic footprints of the Vietnamese Robusta coffee (May 2025)
item Genetic and physical localization of a leaf rust susceptibility gene in barley (May 2025)
item Association analysis identified superior haplotypes for improved salt stress tolerance in wheat (Triticum aestivum L.) (May 2025)
item Genetic gains from sixty years of spring wheat breeding in the northern plains of the U.S. (May 2025)
item Shotgun metagenome analysis of two Schizaphis graminum biotypes over time with and without carried Cereal Yellow Dwarf Virus (May 2025)
item SsMet1 is a critical gene in methionine biosynthesis in Sclerotinia sclerotiorum (May 2025)
item Unraveling genomic regions and optimizing genomic predictions for grain yield and yield-related traits in oats (Avena sativa L.) (May 2025)
item Identification of a novel genetic locus conferring virulence in the wheat tan spot pathogen Pyrenophora tritici-repentis (May 2025)
item Variant filters using segregation information improve mapping of nectar production genes in sunflower (Helianthus annuus L.) (May 2025)
item Evaluation of genotype x environment interaction using yield and UAV-based vegetation index data from multi-environment trials in chickpea (May 2025)
item Multi-experiment and multi-locus genome-wide association mapping for grain arsenic in rice population (May 2025)
item Seed-yield components, reproductive health, and ecological fitness of six Snake River wheatgrass populations (May 2025)
item Extensive modulation of a conserved cis-regulatory code across 589 grass species (Apr 2025)
item Biology, ecology, and pest management of the red sunflower seed weevil (Coleoptera: Curculionidae) (Apr 2025)
item Genetic analysis and molecular mapping of the purple leaf sheath in barley (Hordeum vulgare) (Apr 2025)
item A global assembly of landrace oat (Avena sativa L.) accessions is a discovery resource for adaptive variation, association mapping, and trait deployment (Apr 2025)
item Different concentrations of 2-undecanone triggers repellent and nematicidal responses in Caenorhabditis elegans (Apr 2025)
item Protein kinase-major sperm protein (PK-MSP) genes mediate recognition of the fungal necrotrophic effector SnTox3 to cause septoria nodorum blotch in wheat (Apr 2025)
item Evaluation of biological fungicides for the management of rice sheath blight in Arkansas, 2023 (Apr 2025)
item Pre-breeding studies focused on rice grown in temperate regions at the USDA-ARS Dale Bumpers National Rice Research Center (Apr 2025)
item Interannual variation in soil respiration and its components across cropland, grassland, and pasture in the agro-pastoral ecotone of Northern China (Apr 2025)
item Accelerating Agricultural Research Through Interoperable Genetic and Phenotypic Variation Data (Apr 2025)
item GrameneOryza: A Comprehensive Resource for Oryza Genomes, Genetic Variation, and Functional Data (Apr 2025)
item Elite cacao clonal cultivars with diverse genetic structure, high production potential, and good organoleptic quality are helping to rebuild the cocoa industry in Brazil (Apr 2025)
item Elite cacao clonal cultivars with diverse genetic structure, high potential of production, and good organoleptic quality are helping to rebuild the cocoa industry in Brazil (Apr 2025)
item Comparative study of different water management practices on element content in rice grain, yield, and yield components (Apr 2025)
item Evaluation of durum and hard red spring wheat panels for sensitivity to necrotrophic effectors produced by Parastagonospora nodorum (Apr 2025)
item Modern tools for unveiling the genetic basis of prickliness in plants and their applications in plant breeding (Mar 2025)
item Unlocking genomic diversity through comparative and pan-genome analysis for crop research communities (Mar 2025)
item 'USDA-Accelerate' creeping foxtail, a new creeping foxtail with increased seedling vigor (Mar 2025)
item Understanding nitrogen adaptation in maize and sorghum through gene networks (Mar 2025)
item Haplotype analysis identified key genes associated with improved salt stress tolerance in wheat (Triticum aestivum L.) (Mar 2025)
item Chromosome-level haplotype-resolved genome assembly of bread wheat’s wild relative Aegilops mutica (Mar 2025)
item Genetic and pathogenic diversity among isolates of Diaporthe helianthi causing Phomopsis stem canker on cultivated sunflower (Mar 2025)
item Characterization of key regulators in microRNA-mediated responses to phosphate deficiency during Arabidopsis root development (Mar 2025)
item Genomic strategies to improve nitrogen use efficiency and reduce nitrate levels in sorghum forage lines (Mar 2025)
item Understanding iron response mechanisms and carbon partitioning strategies in sorghum under Fe stress (Mar 2025)
item Pan-transcriptome of delevoping sorghum meristems reveal putative regulatory targets for mature seed traits (Mar 2025)
item Gramene plants: empowering agricultural research from genomic diversity through pan-genome analysis (Mar 2025)
item Maize data for biology, breeding, and genomics: the pan maize gramene database (Mar 2025)
item Assessment of NPGS sugar beet germplasm for resistance to Rhizoctonia Root and Crown Rot in Fort Collins, CO, 2024 (Mar 2025)
item Status on genetic resistance to rice blast disease in the post genomic era (Mar 2025)
item Spatial predictions of soil moisture across a longitudinal gradient in semiarid ecosystems using UAV and RGB sensors (Mar 2025)
item Using Pan-genomes, Databases, and Genomics to Advance Agriculture (Feb 2025)
item Genetic and phenotypic responses of temperature-independent Hessian fly resistant durum wheat to larval attack during heat stress (Feb 2025)
item Assessing the performance of generative artificial intelligence in retrieving information against manually curated genetic and genomic data (Feb 2025)
item First report of Diaporthe caulivora causing Phomopsis stem canker on sunflower (Helianthus annuus L.) in Minnesota (Feb 2025)
item Identification of stem rust resistance genes in monogenic lines derived from wheat cultivar Waldron (Feb 2025)
item Leveraging historical trials to predict Fusarium head blight resistance in wheat breeding programs (Feb 2025)
item Higher order repeat structures reflect diverging evolutionary paths in maize centromeres and knobs (Feb 2025)
item Quantitative trait loci analysis for anthracnose resistance in a population derived from Andean varieties Bukoba and Kijivu of common bean (Phaseolus vulgaris L.) (Jan 2025)
item Extensive genome evolution distinguishes maize within a stable tribe of grasses (Jan 2025)
item Guidelines for gene and genome assembly nomenclature (Jan 2025)
item Genomic strategies to facilitate breeding for increased ß-Glucan content in oat (Avena sativa L.) (Jan 2025)
item Genome-wide association and genomic prediction of alfalfa (Medicago sativa L.) biomass yield under drought stress (Jan 2025)
item Aus sub-population of Oryza sativa L. for bridging food security and water sustainability in rice (Jan 2025)
item Genome-Wide Association and Genomic Prediction of Alfalfa (Medicago sativa L.) Biomass Yield Under Drought Stress (Jan 2025)
item Metabolic engineering of lipid biosynthesis enhances oil composition in oat (Jan 2025)
item Surveys of Magnaporthe oryzae genotypes in breeding stations and commercial rice fields in Arkansas, Louisiana and Puerto Rico from 2017 to 2019 (Jan 2025)
item The construction of a standard karyotype of intermediate wheatgrass and its potential progenitor species (Jan 2025)
item The history and hidden impacts of subpopulation introgressions in US rice breeding (Jan 2025)
item AlphaFold application in the rice blast system (Jan 2025)
item Overexpression of the QTL OsABC9 enhances resistance to rice sheath blight (Jan 2025)
item Epigenetic mapping to unravel the driving forces of stress response variation in oats (Jan 2025)
item Using ontologies to identify genetic loci overlapping across multiple traits in a tropical Japonica rice core panel (Jan 2025)
item Insights into the resistance mechanisms of Aegilops umbellulata against leaf rust and bacterial leaf streak using transcriptomics (Jan 2025)
item Deciphering the genetic basis of salt stress tolerance in wheat (Triticum aestivum L.) through association studies and SNP-based haplotype analysis (Jan 2025)
item Empowering Sorghum Research: SorghumBase as a Hub for Genomic Data and Community Collaboration (Jan 2025)
item Registration of three long grain rice germplasm lines with improved blast resistance with the Ptr gene, low chalk, excellent milling quality, and good yield (Jan 2025)
item Effects of ray petals and disc color on pollinator visitation and seed damage (Jan 2025)
item Spatial patterns of seed weevil damage in grower fields in central South Dakota (Jan 2025)
item Update on effects of planting date on seed weevil damage and other yield components (Jan 2025)
item Genetic and physical localization of Hessian fly resistance genes in barley (Jan 2025)
item Genome-wide association studies for seed thermoinhibition in lettuce reveals the interplay of seed age, color, and germination under high temperatures (Jan 2025)
item MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication (Dec 2024)
item Unveiling the genetic diversity and demographic history of coffea stenophylla in Sierra Leone using genotyping-by-sequencing (Dec 2024)
item Maize and wild relatives show distinct patterns of genome downsizing following polyploidy (Dec 2024)
item Transcriptomic profiling reveals distinct plant responses to beet curly top virus (BCTV) infection in resistant and susceptible sugar beet genotypes (Dec 2024)
item Maize inbreds show allelic variation for diel transcription patterns (Dec 2024)
item Association mapping of drought stress response for yield and quality traits in barley (Dec 2024)
item Development and validation of a quantitative PCR assay method to assess relative resistance of winter wheat to dwarf bunt at early growth stages (Dec 2024)
item Effect of alternate wetting and drying and organic matter addition on greenhouse gas and arsenic dynamics in rice paddy soil (Dec 2024)
item AMMI and GGE biplot analysis of seed protein concentration, yield, and 100-seed weight for chickpea cultivars and breeding lines in the US Pacific Northwest (Dec 2024)
item Genome-wide characterization and evolutionary analysis of the AP2/ERF gene family in lettuce (Lactuca sativa) (Dec 2024)
item A barley MLA receptor is targeted by a specialized non-ribosomal peptide effector of the necrotrophic spot blotch fungus to induce disease susceptibility (Dec 2024)
item Evolutionary signatures of the erosion of sexual reproduction genes in domesticated cassava (Manihot esculenta) (Dec 2024)
item Dual mechanisms of salinity tolerance in wheat germplasm lines W4909 and W4910 (Nov 2024)
item Building a FAIR data ecosystem for incorporating single-cell transcriptomics data into agricultural genome to phenome research (Nov 2024)
item A fully phased, chromosome-scale genome of sugar beet line FC309 enables the discovery of Fusarium yellows resistance QTL (Nov 2024)
item Characterization and genomic insights for the emerging rice pathogen, Pantoea ananatis (Nov 2024)
item Lambs grazing with adult ewes prefer forbs with high-nutrient content in native grasslands dominated by Leymus chinensis and Stipa grandis (Nov 2024)
item Genome-Wide Association Study for drought response traits in a diverse tropical japonica rice panel (Nov 2024)
item Mining the diversity in rice and it’s ancestral species for rice improvement (Nov 2024)
item Genetic mapping of QTLs for resistance to bacterial leaf streak in hexaploid wheat (Nov 2024)
item The impact of pollen and nectar availability on insect communities of cultivated sunflowers (Nov 2024)
item Genome-wide dissection and haplotype analysis identified superior haplotypes for improved salt stress tolerance in wheat (Triticum aestivum L.) (Nov 2024)
item She loves me / she loves me not: How petal and anthocyanin presence in cultivated sunflower affect native bee foraging preferences (Nov 2024)
item Population genomics of red sunflower seed weevil, Smicronyx fulvus (Nov 2024)
item Diversity and composition of pollen collected by the sunflower specialists Melissodes agilis and M. trinodis (Nov 2024)
item Genetic variation and population structure of the rice accessions maintained in the AfricaRice genebank using DArTseq (Nov 2024)
item A standard area diagram for Fusarium yellows rating in sugar beet (Beta vulgaris L.) (Nov 2024)
item Manifold and spatiotemporal learning on multispectral unoccupied aerial system imagery for phenotype prediction (Nov 2024)
item Functional diversification within the heme-binding split-barrel family (Nov 2024)
item Prediction of turfgrass quality using multispectral UAV imagery and Ordinal Forests: Validation using a fuzzy approach (Nov 2024)
item An effector essential for virulence of necrotrophic fungi targets plant HIRs to inhibit host immunity (Oct 2024)
item Environment, plant genetics, and their interaction shape important aspects of sunflower rhizosphere microbial communities (Oct 2024)
item Genomic dissection of barley regeneration ability 1 (Bra1) and its integration with RoboSeed for genome editing with mature embryos (Oct 2024)
item Plastid terminal oxidase is required for chloroplast biogenesis and tillering control in barley (Oct 2024)
item Triticum monococcum subsp. monococcum and aegilopoides: new sources of resistance to the dipteran pest, Hessian fly (Diptera: Cecidomyiidae) (Oct 2024)
item Precise, quantitative measurement of sunflower capitulum inclination: a trigonometry-based approach (Oct 2024)
item Guadeloupe and Haiti’s Coffee genetic resources reflect the crop’s history of regional and global dispersal (Oct 2024)
item Fishing for a reelGene: evaluating gene models with evolution and machine learning (Sep 2024)
item Metabolic engineering-induced transcriptome reprogramming enhance oil composition and content in oat (Avena sativa L.) (Sep 2024)
item Identification of two QTL for Hessian fly resistance in tetraploid wheat (Sep 2024)
item Elucidating genetic determinants for salt tolerance in spring wheat (Triticum aestivum L.) (Sep 2024)
item Genomes of Aegilops umbellulata provide new insights into unique structural variations and genetic diversity in the U-genome for wheat improvement (Sep 2024)
item Assembly, comparative analysis, and utilization of a single haplotype reference genome for soybean (Sep 2024)
item Challenges and opportunities of rice disease managements in the USA (Sep 2024)
item Undercover genes: The hidden impact of introgressions in US rice (Sep 2024)
item Understanding blast resistance through overexpression of the Pita-2 gene in rice (Sep 2024)
item GrameneOryza 2024: A Collaborative Pan-Genome Resource for Rice Diversity, Knowledge Discovery, and Community Engagement (Sep 2024)
item Legume genome structures and histories inferred from Cercis canadensis and Chamaecrista fasciculata genomes (Sep 2024)
item Mapping yield related traits in a suite of six oryza rufipogon species complex chromosome segment substitution line libraries in Indica and Japonica rice backgrounds (Sep 2024)
item Improving rice milling quality by identifying and deploying loci affecting kernel fissure resistance (Sep 2024)
item Aus sub-population of Oryza sativa L.: a unique source for improving rice sustainability and climate resiliency related traits in elite US rice varieties (Sep 2024)
item Rice germplasm characterization and enhancement for the sustainability and resilience of the US rice industry using functional genomics toolsand stress tolerance (Sep 2024)
item A review on soil moisture dynamics monitoring in semi-arid ecosystems: Methods, techniques, and tools applyied at different scales (Aug 2024)
item Evaluation of fungicide seed treatmnents for control of chickpea damping-off caused by metalaxyl-resistant Pythium spp. 2023 (Aug 2024)
item Field evaluation of fungicides for managing Ascochyta blight on chickpea, 2023 (Aug 2024)
item Pandagma: a tool for identifying pan-gene sets and gene families at desired evolutionary depths and accommodating whole genome duplications (Aug 2024)
item Identification of genetic loci for grain traits and disease resistance reveals a potential trade off in rice (Aug 2024)
item Advances in quantitative genetic analysis in sunflower, applied to breeding programs (Aug 2024)
item The effects of abiotic stressors on rice resistance responses to the blast fungus Magnaporthe oryzae (Aug 2024)
item Tools and resources at the maize genetics and genomics database (MaizeGDB) (Aug 2024)
item Genomic analysis of sheath blight resistance in rice: identifying resistant accessions and key genetic markers (Aug 2024)
item Functional analysis of a new allele of the broad-spectrum rice blast resistance gene Ptr in weedy species of rice (Aug 2024)
item Protected Rice - Blast resistance genes, genetic markers developed from a cloned major blast resistance gene resulted in more than a dozen U.S. blast resistant rice varieties and germplasm lines (Aug 2024)
item Rice 'Tiara' - High in Antioxidants (Aug 2024)
item Rice 'Jojutla' - Parboiling Quality (Aug 2024)
item Receptor-ligand interactions in the rice blast system revealed by AlphaFold protein structure prediction (Aug 2024)
item Characterization of the uniform regional rice nursery (URRN) for blast and quality using molecular markers for US rice breeding programs. (Aug 2024)
item Development, gene discovery and allele mining of a global tropical japonica core collection (Aug 2024)
item Convergent evolution of plant prickles is driven by repeated gene co-option over deep time (Aug 2024)
item USDA ARS has hidden treasure! genetic discoveries in the USDA collection of world rice varieties (Aug 2024)
item USDA ARS DB NRRC research on rice sustainability and tolerance to biotic & abiotic stresses (Aug 2024)
item USDA ARS develops a new production system for food sustainability and security (Aug 2024)
item USDA ARS develops pre-breeding rice germplasm for enhanced yield, grain quality and stress tolerance (Aug 2024)
item Species-specific microsymbiont discrimination mediated by a Medicago receptor kinase (Jul 2024)
item Surveys of Magnaporthe oryzae genotypes in breeding stations and commercial rice fields in Arkansas, Louisiana and Puerto Rico from 2017 to 2019 (Jul 2024)
item Unraveling the genetic diversity of Magnaporthe oryzae through a graph pangenome approach (Jul 2024)
item Analyzing Medicago spp. seed morphology using GWAS and machine learning (Jul 2024)
item Genomic insights for enhanced sheath blight resistance in rice (Oryza sativa L.) (Jul 2024)
item Understanding the impact of seed-borne pantoea ananatis on rice crop (Jul 2024)
item Genomic insights and primer design for the rice pathogen, Pantoea ananatis (Jul 2024)
item Identification of blast resistance QTLs in black hull awn weedy rice (RR14) and Aus-196 rice variety (Jul 2024)
item Biological Control of Clubroot of Rapeseed (Plasmodiophora brassicae) by the Endophytic Fungus Didymella macrostoma P2 (Jul 2024)
item Vegetative indices data boost genomic selection models in predicting oat grain yield (Jul 2024)
item Understanding the genetic basis of stem rust resistance in southeastern US oat through genome wide association stud (Jul 2024)
item Can GWAS information from oat breeding programs be used to develop higher-yield oat varieties? A case study in the SDSU Oat Breeding Program (Jul 2024)
item Complex reticulation in backbone subfamily relationships in Leguminosae (Jul 2024)
item Association studies of salinity tolerance in sunflower provide robust breeding and selection strategies under climate change (Jul 2024)
item Arabidopsis and maize terminator strength is determined by GC content, polyadenylation motifs and cleavage probability (Jul 2024)
item The identification of the peanut wild relative Arachis stenosperma as a source of resistance to stem rot and analyses of genomic regions conferring disease resistance through QTL mapping (Jul 2024)
item Clover (Trifolium spp.) inclusion in Kentucky bluegrass (Poa pratensis) lawns (Jul 2024)
item Evolution, diversity, and function of the disease susceptibility gene Snn1 in wheat (Jun 2024)
item Association analysis identified candidate genomic regions for heat stress tolerance in bread wheat (Triticum aestivum L.) (Jun 2024)
item Efficacy of red sunflower seed weevil resistance from inbred line cms HA 488 in single-cross hybrids (Jun 2024)
item Receptor- ligand interactions in plant inmate immunity revealed by artificial intelligence AlphaFold (Jun 2024)
item Cross-species modeling of plant genomes at single nucleotide resolution using a pre-trained DNA language model (Jun 2024)
item Genetic mapping of a recessive resistance to stripe rust in barley (Jun 2024)
item Using major resistance genes to manage rice blast disease in the USA (Jun 2024)
item Dissection of nonhost resistance in barley to the heterologous leaf rust pathogen Puccinia triticinay (Jun 2024)
item Discovering bacterial leaf streak disease resistance loci in barley in the interspecific Cytonuclear Multi-Parent Population (CMPP) (Jun 2024)
item Genomic regions associated with spot blotch (SB) resistance in barley in the interspecific cytonuclear multi-parent population (CMPP) (Jun 2024)
item Map-based cloning of the Nec50 gene which regulates programmed cell death in barley (Jun 2024)
item Fine mapping of a QTL conferring susceptibility to spot blotch in barley (Jun 2024)
item SorghumBase: A Public Genetic and Genomic Resource for the Sorghum Community (Jun 2024)
item Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress (May 2024)
item Implementing multi-trait genomic selection to improve grain milling quality in oats (Avena sativa L.) (May 2024)
item Identifying genomic regions associated with key agro-morphological traits in soft red winter wheat using genome-wide association study (May 2024)
item Low frequency of the wild-type freezing-tolerance LsCBF7 allele among lettuce population suggest negative selection during domestication and breeding (May 2024)
item Future of durum wheat research and breeding: insights from early career researchers (May 2024)
item A unified VCF dataset from nearly 1,500 diverse maize accessions and resources to explore the genomic landscape of maize (May 2024)
item An effector SsCVNH promotes the virulence of Sclerotinia sclerotiorum through targeting class III peroxidase AtPRX71 (May 2024)
item Chromosome-scale genome assembly of bread wheat’s wild relative Triticum timopheevii (Apr 2024)
item Current genomic deep learning architectures generalize across grass species but not alleles (Apr 2024)
item Three de novo assembled wild cacao genomes from Upper Amazon reveal new insights into an early divergence of chocolate trees (Apr 2024)
item Genome-wide association study of seed morphology-related traits in sorghum mini core and Senegalese lines (Apr 2024)
item Enhanced pan-genomic resources at the maize genetics and genomics database (Apr 2024)
item Role of moss and Arabidopsis zinc-fnger homeodomain transcription factors in regulating plant architecture (Apr 2024)
item Genome-wide association analysis uncovers genes associated with resistance to head smut pathotype 5 in senegalese sorghum accessions (Mar 2024)
item Efforts to re-establish sunflower IPM in South Dakota (Mar 2024)
item Towards a more holistic approach for red sunflower seed weevil management (Mar 2024)
item Harnessing the predicted maize pan-interactome for putative gene function prediction and prioritization of candidate genes for important traits (Mar 2024)
item Spatio-temporal modeling of high-throughput multispectral aerial images improves agronomic trait genomic prediction in hybrid maize (Mar 2024)
item The Hessian fly resistance gene HvRHF1 is localized in an NBS-LRR gene cluster in barley (Mar 2024)
item Elucidating the effect of polyphenol-protein interactions on rheological properties of purple waxy rice (Mar 2024)
item Beet crop wild relative germplasm mining uncovers new sources of disease resistance (Feb 2024)
item MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication. (Feb 2024)
item Tetraploid wheat (Triticum turgidum) lines from the United States as a source of Hessian fly (Mayetiola destructor) resistance (Feb 2024)
item A combination of conserved and diverged responses underlies Theobroma cacao’s defense response to Phytophthora palmivora (Feb 2024)
item Muller’s Ratchet in Action: The Erosion of Sexual Reproduction Genes in Domesticated Cassava (Manihot esculenta) (Feb 2024)
item PanEffect: a pan-genome visualization tool for variant effects in maize (Feb 2024)
item Strategies and ongoing research for managing the red sunflower seed weevil (Feb 2024)
item Future outlook of dryland crop production systems in the semi-arid High Plains amid climate change (Feb 2024)
item Hessian fly (Diptera: Cecidomyiidae) virulence in Louisiana: assessment of field populations from 2023 to efficacy of 27 Hessian fly resistance genes in wheat (Jan 2024)
item PhosBoost: Improved phosphorylation prediction recall using gradient boosting and protein language models (Jan 2024)
item Agrobacterium-mediated transfer of the Fusarium graminearum Tri6 gene into barley using mature seed-derived shoot tips as explants (Jan 2024)
item One hundred years of comparative genetic and physical mapping in cultivated oat (Avena sativa) (Jan 2024)
item Establishing a global Tropical Japonica rice core collection for allele mining and gene discovery: construction, sequencing, and phenotyping (Jan 2024)
item Development of epigenetic landscape and gene expression atlas of oats (Jan 2024)
item Haplotype and transcriptome analyses reveal genes and gene regions that promote FHB resistance in spring wheat (Jan 2024)
item The USDA-SoyWheOatBar-3K: a rapid, inexpensive genotyping platform to enable genomics-assisted breeding of small grains (Jan 2024)
item Exploratory genomic sequence analysis reveals structural differences at key loci for growth habit, seed dormancy, and rust resistance in barley (Jan 2024)
item Towards improving oil composition and content in oat through metabolic engineering (Jan 2024)
item Genetic mapping of resistance QTLs to bacterial leaf streak in wheat (Jan 2024)
item Identification of QTLs associated with yield components, agronomic traits, and kernel parameters in hard red spring wheat (Jan 2024)
item Telomere-to-telomere genome assembly and resequencing of 20 Aegilops umbellulata genomes reveals broad genetic and phenotypic diversity for novel disease resistance traits (Jan 2024)
item Molecular cloning of the septoria nodorum blotch susceptibility gene Snn2 in wheat (Jan 2024)
item Introduction rice as a model for genetics, genomics, and breeding (Jan 2024)
item Genome-wide association study unravel the genetic basis of seedling heat stress tolerance in wheat (Triticum aestivum L.) (Jan 2024)
item Molecular mapping of a novel genetic locus governing enhanced susceptibility to tan spot in durum wheat (Jan 2024)
item Effects of early planting and early-maturing sunflower hybrids on damage from the red sunflower seed weevil (Jan 2024)
item Cytonuclear analysis of barley spike traits using a cytoplasm-aware population (Jan 2024)
item Plastid terminal oxidase is required for chloroplast biogenesis and tillering control in barley (Jan 2024)
item A uniform gene and chromosome nomenclature system for oat (Avena spp.) (Jan 2024)
item Understanding the cocoa genetic resources in the Pacific to assist producers to supply the growing craft market (Dec 2023)
item Genotype and phenotype data standardization, utilization and integration in the big data era for agricultural sciences (Dec 2023)
item Genotype and phenotype data standardization, utilization and integration in the big data era for agricultural sciences (Dec 2023)
item The identity, virulence, and antifungal effects of the Didymellacesous fungi associated with the Rapeseed Blackleg pathogen Leptosphaeria biglobosa (Dec 2023)
item Map-based cloning of the Liguleless1 gene regulating architecture in barley (Dec 2023)
item A genomic retrospective of beet breeding progress (Nov 2023)
item Reinstatement and expansion of the genus Anatherum (Andropogoneae, Panicoideae, Poaceae) (Nov 2023)
item Introduction of plant transposon annotation for beginners (Nov 2023)
item Untapped sources of dual resistance to Hessian fly and greenbug in synthetic hexaploid wheats (Nov 2023)
item An online database for einkorn wheat to aid in gene discovery and functional genomics studies (Nov 2023)
item Ensembl 2024 (Nov 2023)
item Synergizing Proximal Remote Sensing Modalities for Enhanced Prediction of Key Agronomic Crop Traits (Oct 2023)
item PanEffect: A pan-genome visualization tool for variant effects in maize (Sep 2023)
item Editorial: Advances in Ascochyta Research, Volume II (Sep 2023)
item New whole-genome alignment tools are needed for tapping into plant diversity (Sep 2023)
item Beet crop wild relative germplasm mining uncovers new sources of disease resistance (Sep 2023)
item Transposable element abundance subtly contributes to lower fitness in maize (Sep 2023)
item Quantitative trait locus analysis of Hessian fly resistance in soft red winter wheat (Sep 2023)
item Einkorn genomics sheds light on evolutionary history of the oldest domesticated wheat (Aug 2023)
item Medicago truncatula resources to study legume biology and symbiotic nitrogen fixation (Mar 2023)