Page Banner

United States Department of Agriculture

Agricultural Research Service

Terence R Whitehead (Terry)
Research Microbiologist


Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Sodium tetraborate decahydrate treatment reduces hydrogen sulfide emissions and the sulfate reducing bacteria population of swine manure -
Yokoyama, M.T., Spence, C., Hengemuehle, S.M., Whitehead, T.R., Von Bernuth, R., Cotta, M. 2016. Sodium tetraborate decahydrate treatment reduces hydrogen sulfide emissions and the sulfate reducing bacteria population of swine manure. Journal of Environmental Quality. doi: 10.2134/jeq2016.06.0219.
Genome sequence of a novel multiple antibiotic resistant member of Erysipelotrichaceae family isolated from a swine manure storage pit -
Pirin-like proteins are regulated by oxidative stress and iron in bacteroides fragilis and involved in the modulation of central energy metabolism and metronidazole susceptibility -
Rocha, E.R., Gough, A.M., O Bryan, P.J., Whitehead, T.R., Smith, C. 2016. Pirin-like proteins are regulated by oxidative stress and iron in bacteroides fragilis and involved in the modulation of central energy metabolism and metronidazole susceptibility [abstract]. American Society for Microbiology.
Robinsoniella peoriensis: A model anaerobic commensal bacterium for acquisition of antibiotic resistance? -
Whitehead, T.R. 2016. Robinsoniella peoriensis: A model anaerobic commensal bacterium for acquisition of antibiotic resistance? [abstract]. American Society for Microbiology.
Microbial Ecology of Stored Swine Manure and Reduction of Emissions Using Condensed Tannins. -
Whitehead, T.R. 2015. Microbial Ecology of Stored Swine Manure and Reduction of Emissions Using Condensed Tannins [abstract].
Examination of the Aerobic Microflora of swine feces and stored swine manure -
Whitehead, T.R., Cotta, M.A. 2015. Examination of the aerobic microflora of swine feces and stored swine manure. Journal of Environmental Quality. 45(2):604-608. doi: 10.2134/jeq2015.05.0248.
Miscanthus x giganteus xylooligosaccharides: Purification andfermentation -
Chen, M.H., Bowman, M.J., Cotta, M.A., Dien, B.S., Iten, L.B., Whitehead, T.R., Rausch, K.D., Tumbleson, M.E., Singh, V. 2016. Miscanthus x giganteus xylooligosaccharides: Purification and fermentation. Carbohydrate Polymers. 140:96-103. doi: 10.1016/j.carbpol.2015.12.052.
Savagea faecisuis gen. nov., sp. nov., a tylosin- and tetracycline-resistant bacterium isolated from a swine-manure storage pit Reprint Icon -
Whitehead, T.R., Johnson, C.N., Patel, N.B., Cotta, M.A., Moore, E.R.B., Lawson, P.A. 2015. Savagea faecisuis gen. nov., sp. nov., a tylosin- and tetracycline-resistant bacterium isolated from a swine-manure storage pit. Antonie van Leeuwenhoek. 108(1):151-161.
Analyses of microbial populations and antibiotic resistance present in stored swine manure from underground storage pits -
Whitehead, T.R., Cotta, M.A. 2015. Analyses of microbial populations and antibiotic resistance present in stored swine manure from underground storage pits [abstract].
Draft genome sequences of Streptococcus bovis strains ATCC 33317 and JB1 Reprint Icon -
Benahmed, F.H., Gopinath, G.R., Harbottle, H., Cotta, M.A., Lou, Y., Henderson, C., Teri, P., Soppet, D., Rasmussen, M., Whitehead, T.R., Davidson, M. 2014. Draft genome sequences of Streptococcus bovis strains ATCC 33317 and JB1. Genome Announcements. 2(5):e01012-14.
Peptoniphilus stercorisuis sp. nov. from a swine manure storage tank and description of Peptoniphilaceae fam. nov. -
Johnson, C.N., Whitehead, T.R., Cotta, M.A., Rhoades, R.E., Lawson, P.A. 2014. Peptoniphilus stercorisuis sp. nov. from a swine manure storage tank and description of Peptoniphilaceae fam. nov. International Journal of Systematic and Evolutionary Microbiology. 64:3538-3545.
Examination of the cultivatable, aerobic microflora of swine feces and stored swine manure on various media and antibiotics -
Whitehead, T.R., Cotta, M.A. 2014. Examination of the cultivatable, aerobic microflora of swine feces and stored swine manure on various media and antibiotics [abstract]. American Society of Microbiology. Poster No. 1451.
Effects of chlorophyll-derived efflux pump inhibitor pheophorbide a and pyropheophorbide a on growth and macrolide antibiotic resistance of indicator and anaerobic swine manure bacteria -
Kraatz, M., Whitehead, T.R., Cotta, M.A., Berhow, M.A., Rasmussen, M.A. 2014. Effects of chlorophyll-derived efflux pump inhibitor pheophorbide a and pyropheophorbide a on growth and macrolide antibiotic resistance of indicator and anaerobic swine manure bacteria. International Journal of Antibiotics. Available: http://dx.doi.org/10.1155/2014/185068.
Inhibition of total gas production, methane, hydrogen sulfide, and sulfate-reducing bacteria from in vitro stored swine manure using condensed tannins -
Whitehead, T.R., Spence, C., Cotta, M.A. 2013. Inhibition of total gas production, methane, hydrogen sulfide, and sulfate-reducing bacteria from in vitro stored swine manure using condensed tannins [abstract]. Waste to Worth: "Spreading" Science & Solutions.
Combination of borax and quebracho condensed tannins treatment to reduce hydrogen sulfide, ammonia and greenhouse gas emissions from stored swine manure -
Yokoyama, M., Whitehead, T.R., Spence, C., Cotta, M.A., Penner, D., Hengemuehle, S., Michael, J. 2013. Combination of borax and quebracho condensed tannins treatment to reduce hydrogen sulfide, ammonia and greenhouse gas emissions from stored swine manure [abstract]. Waste to Worth: "Spreading" Science & Solutions.
Stored swine manure and swine faeces as reservoirs of antibiotic resistance genes -
Whitehead, T.R., Cotta, M.A. 2013. Stored swine manure and swine faeces as reservoirs of antibiotic resistance genes. Letters in Applied Microbiology. 56:264-267.
Inhibition of hydrogen sulfide, methane, and total gas production and sulfate-reducing bacteria in in vitro swine manure by tannins, with focus on condensed quebracho tannins Reprint Icon -
Whitehead, T.R., Spence, C., Cotta, M.A. 2013. Inhibition of hydrogen sulfide, methane, and total gas production and sulfate-reducing bacteria in in vitro swine manure by tannins, with focus on condensed quebracho tannins. Applied Microbiology and Biotechnology. 97:8403-8409.
Effects of chlorophyll-derived efflux pump inhibitor pheophorbide a and pyropheophorbide a on erythromycin resistance of Staphylococcus aureus, Enterococcus faecalis, Salmonella Typhimurium and Escherichia coli -
Kraatz, M., Whitehead, T.R., Cotta, M.A. 2012. Effects of chlorophyll-derived efflux pump inhibitor pheophorbide a and pyropheophorbide a on erythromycin resistance of Staphylococcus aureus, Enterococcus faecalis, Salmonella Typhimurium and Escherichia coli. American Public Health Association 140th Annual Meeting and Exposition.
Erratum to: two novel species Enterococcus lemanii sp. nov. and Enterococcus eurekensis sp. nov., isolated from a swine manure storage pit -
Cotta, M.A., Whitehead, T.R., Falsen, E., Moore, E., Lawson, P.A. 2013. Erratum to: Two novel species Enterococcus lemanii sp. nov. and Enterococcus eurekensis sp. nov., isolated from a swine manure storage pit. Antonie van Leeuwenhoek. 103:1409-1418.
Analyses of methanogenic archaea populations in swine feces and stored swine manure using 16S rDNA and mcrA PCR and pure culture isolation -
Microbial production of volatile sulphur compounds in the large intestine of pigs fed two different diets -
Poulsen, H.V., Jensen, B.B., Finster, K., Spence, C., Whitehead, T.R., Cotta, M.A., Canibe, N. 2012. Microbial production of volatile sulphur compounds in the large intestine of pigs fed two different diets. Journal of Applied Microbiology. 113:143-154.
Inhibition of total gas production, hydrogen sulfide, and sulfate-reducing bacteria from in vitro stored swine manure using condensed tannins -
Whitehead, T.R., Spence, C., Cotta, M.A. 2011. Inhibition of total gas production, hydrogen sulfide, and sulfate-reducing bacteria from in vitro stored swine manure using condensed tannins [abstract]. In: Proceedings of the 2011 Allen D. Leman Swine Conference, September 18-20, 2011, St. Paul, Minnesota. p. 277.
Inhibition of total gas production, hydrogen sulfide, and sulfate-reducing bacteria from in vitro stored swine manure using condensed tannins -
Combined borax and tannin treatment of stored dairy manure to reduce bacterial populations and hydrogen sulfide emissions -
Spence, C., Seymour, K., Whitehead, T.R., Cotta, M.A., Hengemuehle, S., Yokoyama, M. 2011. Combined borax and tannin treatment of stored dairy manure to reduce bacterial populations and hydrogen sulfide emissions [abstract]. American Society for Microbiology. Paper No. 2809.
Effect of dietary inorganic sulfur level on growth performance, fecal composition, and measures of inflammation and sulfate-reducing bacteria in the intestine of growing pigs -
Kerr, B.J., Weber, T.E., Ziemer, C.J., Spence, C., Cotta, M.A., Whitehead, T.R. 2011. Effect of dietary inorganic sulfur level on growth performance, fecal composition, and measures of inflammation and sulfate-reducing bacteria in the intestine of growing pigs. Journal of Animal Science. 89:426-437.
Treatment of colitis with a commensal gut bacterium engineered to secrete human TGF-beta1 under the control of dietary xylan -
Hamady, Z.Z., Scott, N., Farrar, M.D., Wadhwa, M., Dilger, P., Whitehead, T.R., Holland, K.T., Lodge, J.P., Carding, S.R. 2011. Treatment of colitis with a commensal gut bacterium engineered to secrete human TGF-beta1 under the control of dietary xylan. Inflammatory Bowel Diseases. 17(9):1925-1935.
Peptostreptococcus russellii sp. nov., isolated from a swine-manure storage pit -
Whitehead, T.R., Cotta, M.A., Falsen, E., Moore, E., Lawson, P.A. 2011. Peptostreptococcus russellii sp. nov., isolated from a swine-manure storage pit. International Journal of Systematic and Evolutionary Microbiology. 61(8):1875-1879.
Inhibitory Effects of Condensed Tannins on Sulfate-Reducing Bacteria Populations and Hydrogen Sulfide Production from Swine Manure -
Borax and Octabor Treatment of Stored Swine Manure: Reduction in Hydrogen Sulfide Emissions and Phytotoxicity to Agronomic Crops -
The swine gastrointestinal tract and stored manure: reservoirs of antibiotic resistance? -
Whitehead, T.R., Cotta, M.A. 2010. The swine gastrointestinal tract and stored manure: reservoirs of antibiotic resistance?. American Society for Microbiology. Paper No. Z-978.
Borax and octabor treatment of stored swine manure to reduce sulfate reducing bacteria and hydrogen sulfide emissions -
Spence, C., Whitehead, T.R., Cotta, M.A., Von Bernuth, R., Hengemuchle, S.M., Penner, D., Yokoyama, M.T. 2010. Borax and octabor treatment of stored swine manure to reduce sulfate reducing bacteria and hydrogen sulfide emissions [abstract]. American Society for Microbiology. Paper No. Q-1484.
Investigation of Methanogen Diversity in Stored Swine Manure -
Xylan-regulated Delivery of Human Keratinocyte Growth Factor-2 to the Inflamed Colon by the Human Anaerobic Commensal Bacterium Bacteroides ovatus -
Hamady, Z.Z., Scott, N., Farrar, M.D., Lodge, J.P., Holland, K.T., Whitehead, T.R., Carding, S.R. 2010. Xylan-regulated Delivery of Human Keratinocyte Growth Factor-2 to the Inflamed Colon by the Human Anaerobic Commensal Bacterium Bacteroides ovatus. Gut. 59(4):461-469.
Development of a quantitative real-time PCR assay for detection and enumeration of methanogenic archaea in stored swine manure -
Group specific quantitative real-time polymerase chain reaction (qRT-PCR) analysis of methanogenic archaea in stored swine manure -
Microbial Ecology of and Antimicrobial Resistance in Stored Swine Manure -
The genome sequence of bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome -
Sela, D.A., Chapman, J., Adeuya, A., Kim, J.H., Chen, F., Whitehead, T.R., Lapidus, A., Rokhsar, D.S., Lebrilla, C.B., German, J.B., Price, N.P., Richardson, P.M., Mills, D.A. 2008. The Genome Sequence of Bifidobacterium longum subsp. infantis Reveals Adaptations for Milk Utilization Within the Infant Microbiome. Proceedings of the National Academy of Sciences. 105(48):18964-18969.
Carbohydrate Metabolism in Bifidobacteria: Human Symbiotic Bacteria -
Price, N.P., Adeuya, A., Whitehead, T.R. 2008. Carbohydrate Metabolism in Bifidobacteria: Human Symbiotic Bacteria [abstract]. 11th Bratislava Symposium on Saccharides, Bratislava, Slovakia. p. 45.
Isolation of skatole-producing bacteria from stored swine manure: individual or consortium? -
Quantitative real-time PCR analyses of sulfate-reducing bacteria in swine manure and the inhibitory effects of condensed tannins -
Identification and Use of the Putative Bacteroides ovatus Xylanase Promoter for the Inducible Production of Recombinant Human Proteins -
Hamady, Z.Z.R., Farrar, M.D., Whitehead, T.R., Holland, K.T., Lodge, J.P.A., Carding, S.R. 2008. Identification and Use of the Putative Bacteroides ovatus Xylanase Promoter for the Inducible Production of Recombinant Human Proteins. Microbiology. 154(10):3165-3174.
Effects of dietary inorganic sulfate levels on growth performance and markers of intestinal inflammation in growing pigs -
Weber, T.E., Spence, C., Whitehead, T.R., Kerr, B.J. 2008. Effects of dietary inorganic sulfate levels on growth performance and markers of intestinal inflammation in growing pigs. Journal of Animal Science. 86(E-Suppl. 2):444.
Detection of methanogenic archaea in stored swine manure by direct mcrA PCR and sequence analysis -
Development and Comparison of SYBR Green Quantitative Real-time PCR Assays for Detection and Enumeration of Sulfate-reducing Bacteria in Stored Swine Manure -
Spence, C., Whitehead, T.R., Cotta, M.A. 2008. Development and Comparison of SYBR Green Quantitative Real-time PCR Assays for Detection and Enumeration of Sulfate-reducing Bacteria in Stored Swine Manure. Journal of Applied Microbiology. 105(6):2143-2152.
Analyses of the bifid shunt and carbohydrate metabolism in Bifidobacterium spp. using **13C-labeled substrates and gas chromatography-mass spectrometry -
Whitehead, T.R., Adeuya, A., Price, N.P. 2008. Analyses of the bifid shunt and carbohydrate metabolism in Bifidobacterium spp. using **13C-labeled substrates and gas chromatography-mass spectrometry. American Society for Microbiology Meeting. p.
Effects of borax treatment on hydrogen sulfide emissions and sulfate reducing bacteria in stored swine manure -
Robinsonia peoriae Gen. Nov., Sp. Nov., Isolated from a Swine-manure Storage Pit and a Human Clinical Source -
Cotta, M.A., Whitehead, T.R., Falsen, E., Moore, E., Lawson, P.A. 2009. Robinsoniella peoriensis Gen. Nov., Sp. Nov., Isolated from a Swine-manure Storage Pit and a Human Clinical Source. International Journal of Systematic and Evolutionary Microbiology. 59(1):150-155.
Evaluation of the Sulfate-Reducing Bacterial Population Associated With Stored Swine Slurry -
Cook, K.L., Whitehead, T.R., Spence, C., Cotta, M.A. 2008. Evaluation of the sulfate-reducing bacterial population associated with stored swine slurry. Anaerobe. 14:172-180.
Effects of condensed tannins on hydrogen sulfide production and the sulfate-reducing bacterial population of swine manure -
Catabolite pathway for the production of skatole and indole acetic acid by the acetogen Clostridium drakei, Clostridium scatologenes, and swine manure -
Whitehead, T.R., Price, N.P., Drake, H.L., Cotta, M.A. 2008. Catabolic pathway for the production of skatole and indoleacetic acid by the acetogen Clostridium drakei, Clostridium scatologenes, and swine manure. Applied and Environmental Microbiology. 74(6):1950-1953.
Isotopomer-Flux Analysis of Bifidobacterium ssp. Carbohydrate Metabolism -
Price, N.P., Adeuya, A., Whitehead, T.R., Sela, D.A., Mills, D.A. 2007. Isotopomer-Flux analysis of Bifidobacterium ssp. carbohydrate metabolism [abstract]. 4th International Symposium: Milk Genomics & Human Health. Available: http://lactoknow.ucdavis.edu/symposiums. p. 19.
Isotopomer-flux analysis of Bifidobactrium ssp. carbohydrate metabolism -
Price, N.P., Adeuya, A., Whitehead, T.R., Sela, D.A., Mills, D.A. 2007. Isotopomer-flux analysis of Bifidobactrium ssp. carbohydrate metabolism [abstract]. p. 19.
Genus IX. Hespellia -
Whitehead, T.R., Lawson, P.A., Cotta, M.A. 2009. Genus IX. Hespellia. In: De Vos, P., Garrity, G.M., Jones, D., Krieg, N.R., Ludwig, W., Rainey, F.A., Schleifer, K.-H., Whitman, W.B., editors. Bergey's Manual of Systematic Bacteriology. Volume 3. 2nd edition. New York, NY: Springer. p. 944-945.
Genus VII. Atopostipes -
Whitehead, T.R., Lawson, P.A., Cotta, M.A. 2009. Genus VII. Atopostipes. In: De Vos, P., Garrity, G.M., Jones, D., Krieg, N.R., Ludwig, W., Rainey, F.A., Schleifer, K.-H., Whitman, W.B., editors. Bergey's Manual of Systematic Bacteriology. Volume 3. 2nd edition. New York, NY: Springer. p. 566-568
REDUCTION OF EMISSIONS FROM IN VITRO SWINE MANURE USING MONENSIN -
Whitehead, T.R., Cotta, M.A. 2007. Reduction of emissions from in vitro swine manure using monensin [abstract]. Journal of Animal Science. 85(1):92.
VAGOCOCCUS ELONGATUS SP. NOV., ISOLATED FROM A SWINE-MANURE STORAGE PIT -
Lawson, P.A., Falsen, E., Cotta, M.A., Whitehead, T.R. 2007. Vagococcus elongatus sp. nov., isolated from a swine-manure storage pit. International Journal of Systematic and Evolutionary Microbiology. 57:751-754.
BETA-D-XYLOSIDASE FROM SELENOMONAS RUMINANTIUM OF GLYCOSIDE HYDROLASE FAMILY 43 -
Jordan, D.B., Li, X., Dunlap, C.A., Whitehead, T.R., Cotta, M.A. 2007. Beta-D-xylosidase from Selenomonas ruminantium of glycoside hydrolase family 43. Applied Biochemistry and Biotechnology. 136-140:93-104.
THE SWINE GASTROINTESTINAL TRACT AND STORED MANURE: RICH ECOSYSTEMS FOR ISOLATION OF NOVEL BACTERIA -
Whitehead, T.R., Lawson, P.A., Cotta, M.A. 2006. The swine gastrointestinal tract and stored manure: rich ecosystems for isolation of novel bacteria [abstract]. International Microbial Ecology. p. A123.
SWINE FECES AND STORED MANURE: THE SEARCH FOR THE GOOD, THE BAD, AND THE NOT SO BAD -
Lawson, P.A., Whitehead, T.R., Cotta, M.A. 2006. Swine feces and stored manure: the search for the good, the bad, and the not so bad [abstract]. Congress of the Anaerobe Society of the Americas. p. 49.
BETA-D-XYLOSIDASE FROM SELENOMONAS RUMINANTIUM OF GLYCOSIDE HYDROLASE FAMILY 43 -
Jordan, D.B., Li, X., Dunlap, C.A., Whitehead, T.R., Cotta, M.A. 2006. Beta-D-xylosidase from Selenomonas ruminantium of glycoside hydrolase family 43 [abstract]. Gordon Research Conference. p. 3.
STRUCTURE-FUNCTION RELATIONSHIPS OF A CATALYTICALLY EFFICIENT BETA-D-XYLOSIDASE -
Jordan, D.B., Li, X.-L., Dunlap, C.A., Whitehead, T.R., Cotta, M.A. 2007. Structure-function relationships of a catalytically efficient beta-D-xylosidase. Applied Biochemistry and Biotechnology. 141:51-76.
DETERMINATION OF BREAKDOWN PATHWAY OF TRYPTOPHAN AND INDOLE ACETIC ACID TO SKATOLE BY CLOSTRIDIUM DRAKEI AND SWINE MANURE SLURRY -
Whitehead, T.R., Price, N.P., Cotta, M.A. 2006. Determination of breakdown pathway of tryptophan and indole acetic acid to skatole by Clostridium drakei and swine manure slurry [abstract]. Reproduction Nutrition Development. 46(S60):113.
ENGINEERING OF THE HUMAN COMMENSAL BACTEROIDES OVATUS FOR THE IN SITU DELIVERY OF IMMUNOMODULATORY PROTEINS -
Hamady, Z.Z., Farrar, M.D., Whitehead, T.R., Lodge, J.P., Carding, S.R. 2006. Engineering of the human commensal Bacteroides ovatus for the in situ delivery of immunomodulatory proteins [abstract]. Reproduction Nutrition Development. 46(S64):0-18.
STABLE ISOTOPES AND MASS SPECTROMETRY. FLUX ANALYSIS OF THE FRUCTOSE-6-P-PHOSPHOKETOLASE SHUNT PATHWAY IN BIFIDOBACTERIUM. -
Adeuya, A., Whitehead, T.R., Price, N.P. 2006. Stable isotopes and mass spectrometry. Flux analysis of the fructose-6-p-phosphoketolase shunt pathway in bifidobacterium [abstract]. American Society for Mass Spectrometry. 17(5S):118S.
BETA-D-XYLOSIDASE FROM SELENOMONAS RUMINANTIUM OF GLYCOSIDE HYDROLASE FAMILY 43 -
Jordan, D.B., Li, X., Dunlap, C.A., Whitehead, T.R., Cotta, M.A. 2006. Beta-D-xylosidase from Selenomonas ruminantium of glycoside hydrolase family 43 [abstract]. Biotechnology for Fuels and Chemicals. p.93
BACTEROIDES COPROSUIS SP. NOV., ISOLATED FROM SWINE MANURE STORAGE PITS -
Whitehead, T.R., Cotta, M.A., Collins, M.D., Falsen, E., Lawson, P.A. 2005. Bacteroides coprosuis sp. nov., isolated from swine-manure storage pits. International Journal of Systematic and Evolutionary Microbiology. 55:2515-2518.
PHYLOGENETIC IDENTIFICATION OF BACTERIAL MICROFLORA OF IN VITRO RUMINAL PROTOZOAL CULTURES BY 16S RDNA SEQUENCE ANALYSES -
Whitehead, T.R., Dehority, B.A. 2005. Phylogenetic identification of bacterial microflora of in vitro ruminal protozoal cultures by 16S rDNA sequence analyses [abstract]. International Union of Microbiological Societies. Paper No. B-1020.
GAS CHROMATOGRAPHY-MASS SPECTROMETRY (GC-MS) TECHNIQUES FOR METABOLIC FLUX ANALYSIS OF THE BIFIDO SHUNT PATHWAY -
Price, N.P., Whitehead, T.R., Cote, G.L. 2006. Global metabolic flux analysis of the bifidobacterial bifido shunt pathway. Biocatalysis and Biotransformation. 24(1-2):95-98.
DISTRIBUTION OF THE ERMG GENE IN BACTERIAL ISOLATES FROM PORCINE INTESTINAL CONTENTS -
Wang, Y., Wang, G., Shoemaker, N.B., Whitehead, T.R., Salyers, A.A. 2005. Distribution of the ermG gene among bacterial isolates from porcine intestinal contents. Applied and Environmental Microbiology. 71(8):4930-4934.
CHARACTERIZATION OF MICROBIAL POPULATIONS OF IN VITRO RUMINAL PROTOZOAL CULTURES BY 16S RDNA SEQUENCE ANALYSES -
Whitehead, T.R., Dehority, B.A. 2005. Characterization of microbial populations of in vitro ruminal protozoal cultures by 16S rDNA sequence analyses [abstract]. Conference on Gastrointestinal Function. Paper No. 32.
ENGINEERING OF THE GUT COMMENSAL BACTERIUM BACTEROIDES OVATUS TO PRODUCE AND SECRETE BIOLOGICALLY ACTIVE MURINE INTERLEUKIN-2 IN RESPONSE TO XYLAN -
Farrar, M.D., Whitehead, T.R., Lan, J., Dilger, P., Thorpe, R., Holland, K.T., Carding, S.R. 2005. Engineering of the gut commensal bacterium Bacteroides ovatus to produce and secrete biologically active murine interleukin-2 in response to xylan. Journal of Applied Microbiology. 98:1191-1197.
RECOMBINANT BIOCATALYSTS FOR CONVERTING SUGAR MIXTURES TO LACTIC ACID -
Dien, B.S., Whitehead, T.R., Nichols, N.N., Skory, C.D., Cotta, M.A. 2004. Recombinant biocatalysts for converting sugar mixtures to lactic acid [abstract]. Great Lakes Regional American Chemical Society Symposium. Paper No. 40.
DETECTION OF SULFATE REDUCING BACTERIA IN STORED SWINE MANURE USING QUANTITATIVE, REAL-TIME PCR ANALYSIS -
Cook, K.L., Whitehead, T.R., Cotta, M.A. 2004. Detection of sulfate reducing bacteria in stored swine manure using quantitative, real-time pcr analysis [abstract]. Microbial Ecology International Symposium. Paper No. 226.
IDENTIFICATION OF SULFATE-REDUCING BACTERIA FROM STORED SWINE MANURE BY PURE CULTURE ISOLATION AND DIRECT DSRA PCR -
Whitehead, T.R., Cook, K.L., Cotta, M.A. 2004. Identification of sulfate-reducing bacteria from stored swine manure by pure culture isolation and direct dsra pcr [abstract]. Microbial Ecology International Symposium. Paper No. 228.
ISOLATION AND IDENTIFICATION OF SKATOLE-PRODUCING BACTERIA FROM STORED SWINE MANURE -
PURE CULTURE AND PCR ANALYSES OF SULFATE-REDUCING BACTERIA FROM SWINE FECES AND STORED SWINE MANURE -
Whitehead, T.R., Cook, K.L., Cotta, M.A. 2004. Pure culture and pcr analyses of sulfate-reducing bacteria from swine feces and stored swine manure [abstract]. Reproduction Nutrition Development. 44(1):S32.
VARIABILITY IN THE CONCENTRATION OF SULFATE-REDUCING BACTERIA IN SWINE MANURE AND FECES AS DETERMINED USING A REAL-TIME PCR ASSAY -
Cook, K.L., Cotta, M.A., Whitehead, T.R. 2004. Variability in the concentration of sulfate-reducing bacteria in swine manure and feces as determined using a real-time PCR assay [abstract]. Reproduction Nutrition Development. 44(1):S6.
DEVELOPMENT OF A REAL-TIME PCR ASSAY FOR DETECTION OF SULFATE-REDUCING BACTERIA IN STORED SWINE MANURE AND SWINE FECES -
Cook, K.L., Whitehead, T.R., Cotta, M.A. 2004. Development of a real-time PCR assay for detection of sulfate-reducing bacteria in stored swine manure and swine feces [abstract]. American Society for Microbiology. Paper No. Q-093.
ENGINEERING KLEBSIELLA OXYTOCA FOR PRODUCTION OF LACTIC ACID FROM HEXOSE AND PENTOSE -
Dien, B.S., Whitehead, T.R., Nichols, N.N., Cotta, M.A. 2004. Engineering klebsiella oxytoca for production of lactic acid from hexose and pentose [abstract]. Biotechnology for Fuels and Chemicals. Paper No. 2-08.
APPLICATION OF GROUP SPECIFIC AMPLIFIED RDNA RESTRICTION ANALYSIS TO CHARACTERIZE SWINE FECAL AND MANURE STORAGE PIT SAMPLES -
Ziemer, C.J., Cotta, M.A., Whitehead, T.R. 2004. Application of group specific amplified rDNA restriction analysis to characterize swine fecal and manure storage pit samples. Anaerobe. 10:217-227.
ATOPOSTIPES SUICLOACALE GEN. NOV., SP. NOV., ISOLATED FROM AN UNDERGROUND SWINE MANURE STORAGE PIT -
Cotta, M.A., Whitehead, T.R., Collins, M.D., Lawson, P.A. 2004. Atopostipes suicloacale gen. nov., sp. nov., isolated from an underground swine manure storage pit. Anaerobe. 10(3):191-195.
DESCRIPTION OF HESPELLIA STERCORISUIS GEN. NOV. SP. NOV. AND HESPELLIA PORCINUS SP. NOV. ISOLATED FROM MANURE STORAGE PITS -
WHITEHEAD, T.R., COTTA, M.A., COLLINS, M.D., LAWSON, P.A. HESPELLIA STERCORISUIS GEN. NOV., SP. NOV. AND HESPELLIA PORCINUS SP. NOV., ISOLATED FROM SWINE MANURE STORAGE PITS. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 2004. V. 54. P. 241-245.
THE COMMENSAL BACTERIAL POPULATIONS OF SWINE FECES AND STORED SWINE MANURE: RESERVOIRS OF ANTIBIOTIC RESISTANCE? -
WHITEHEAD, T.R., COTTA, M.A., WHITTLE, G., SHOEMAKER, N., SALYERS, A.A. THE COMMENSAL BACTERIAL POPULATIONS OF SWINE FECES AND STORED SWINE MANURE: RESERVOIRS OF ANTIBIOTIC RESISTANCE?. JOURNAL OF ANIMAL SCIENCE. 2003. V. 81(SUPPL.1): ABSTRACT P. 461.
IDENTIFICATION OF NEW ERYTHROMYCIN (ERM(35)) AND TETRACYCLINE (TET(36)) RESISTANCE GENES FROM A BACTEROIDES SP. ISOLATED FROM SWINE MANURE -
WHITEHEAD, T.R., WHITTLE, G., SHOEMAKER, N., COTTA, M.A., SALYERS, A.A. IDENTIFICATION OF NEW ERYTHROMYCIN (ERM(35)) AND TETRACYCLINE (TET(36)) RESISTANCE GENES FROM A BACTEROIDES SP. ISOLATED FROM SWINE MANURE. 103RD ANNUAL MEETING OF THE AMERICAN SOCIETY FOR MICROBIOLOGY. 2003. ABSTRACT P. 20.
IDENTIFICATION OF A NEW RIBOSOMAL PROTECTION TYPE OF TETRACYCLINE RESISTANCE GENE, TET(36), FROM SWINE MANURE PITS -
WHITTLE, G., WHITEHEAD, T.R., HAMBURGER, N., SHOEMAKER, N.B., COTTA, M.A., SALYERS, A.A. IDENTIFICATION OF A NEW RIBOSOMAL PROTECTION TYPE OF TETRACYCLINE RESISTANCE GENE, TET(36), FROM SWINE MANURE PITS. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2003. V. 69. P. 4151-4158.
ISOLATION AND IDENTIFICATION OF HYPER-AMMONIA PRODUCING BACTERIA FROM SWINE MANURE STORAGE PITS -
WHITEHEAD, T.R., COTTA, M.A. ISOLATION AND IDENTIFICATION OF HYPER-AMMONIA PRODUCING BACTERIA FROM SWINE MANURE STORAGE PITS. CURRENT MICROBIOLOGY. 2004. V. 48. P. 20-26.
MOLECULAR TAXONOMY: REVEALING UNSEEN DIVERSITY WITH THE GI TRACT -
LAWSON, P.A., WHITEHEAD, T.R., COTTA, M.A., COLLINS, M.D. MOLECULAR TAXONOMY: REVEALING UNSEEN DIVERSITY WITH THE GI TRACT. 25TH CONFERENCE ON GASTROINTESTINAL FUNCTION. 2003. ABSTRACT P. 28.
HESPELLIA STERCORISUIS GEN. NOV. SP. NOV., AND HESPELLIA PORCINUS SP. NOV., ISOLATED FROM MANURE STORAGE PITS -
LAWSON, P.A., COTTA, M.A., COLLINS, M.D., WHITEHEAD, T.R. HESPELLIA STERCORISUIS GEN. NOV. SP. NOV., AND HESPELLIA PORCINUS SP. NOV., ISOLATED FROM MANURE STORAGE PITS. 25TH CONFERENCE ON GASTROINTESTINAL FUNCTION. 2003. ABSTRACT P. 58.
ISOLATION, CHARACTERIZATION, AND COMPARISON OF BACTERIA FROM SWINE FECES AND MANURE STORAGE PITS -
COTTA, M.A., WHITEHEAD, T.R., ZELTWANGER, R.L. ISOLATION, CHARACTERIZATION, AND COMPARISON OF BACTERIA FROM SWINE FECES AND MANURE STORAGE PITS. ENVIRONMENTAL MICROBIOLOGY. 2003. V. 5. P. 737-745.
DEVELOPMENT AND APPLICATION OF A POLYMERASE CHAIN REACTION ASSAY FOR THE DETECTION AND ENUMERATION OF BILE ACID 7 ALPHA-DEHYDROXYLATING BACTERIA IN HUMAN FECES -
WELLS, J., WILLIAMS, K.B., WHITEHEAD, T.R., HEUMAN, D.M., HYLEMON, P.B. 2003. DEVELOPMENT AND APPLICATION OF A POLYMERASE CHAIN REACTION ASSAY FOR THE DETECTION AND ENUMERATION OF BILE ACID 7 ALPHA-DEHYDROXYLATING BACTERIA IN HUMAN FECES. CLINICA CHIMICA ACTA. 331:127-134.
PERSISTENCE AND FUNCTIONAL IMPACT OF A MICROBIAL INOCULANT ON NATIVE MICROBIAL COMMUNITY STRUCTURE, NUTRIENT DIGESTION, AND FERMENTATION CHARACTERISTICS IN A RUMEN MODEL -
ZIEMER, C.J., SHARP, R., STERN, M.D., COTTA, M.A., WHITEHEAD, T.R., STAHL, D.A. PERSISTENCE AND FUNCTIONAL IMPACT OF A MICROBIAL INOCULANT ON NATIVE MICROBIAL COMMUNITY STRUCTURE, NUTRIENT DIGESTION, AND FERMENTATION CHARACTERISTICS IN A RUMEN MODEL. SYSTEMATIC AND APPLIED MICROBIOLOGY. 2002. V. 25. P. 416-422.
ISOLATION AND CHARACTERIZATION OF AMMONIA-HYPERPRODUCING BACTERIA FROM STORED SWINE MANURE -
PHYLOGENETIC AND PCR ANALYSES OF ANTIBIOTIC RESISTANT BACTERIA FROM SWINE FECES AND MANURE STORAGE PITS -
DIFFERENTIATION BETWEEN MICROBIAL POPULATIONS OF SWINE FECES AND STORED MANURE BY GROUP SPECIFIC AMPLIFIED RDNA RESTRICTION ANALYSIS -
EFFECTS OF MONENSIN ON MICROBIAL ACTIVITY IN IN VITRO SWINE MANURE SLURRIES -
CHARACTERIZATION AND COMPARISON OF MICROBIAL POPULATIONS IN SWINE FECES ANDMANURE STORAGE PITS BY 16S RDNA GENE SEQUENCE ANALYSES -
IDENTIFICATION OF A BROAD-SPECIFICITY XYLOSIDASE/ARABINOSIDASE IMPORTANT FOR XYLOOLIGOSACCHARIDE FERMENTATION BY THE RUMINAL ANAEROBE SELENOMONAS RUMINANTIUM -
MICROBIAL ECOLOGY OF THE RUMEN AND PROSPECTS FOR MANIPULATING RUMEN FUNCTION -
SEQUENCE ANALYSES OF A BROAD HOST-RANGE PLASMID CONTAINING ERMT FROM A TYLOSIN-RESISTANT LACTOBACILLUS SP. ISOLATED FROM SWINE FECES -
ANALYSES OF ANTIBIOTIC RESISTANCE GENES IN ANAEROBIC BACTERIA AND TOTAL DNA FROM SWINE FECES MANURE -
COMPARATIVE CHEMISTRY AND MICROBIAL COMMUNITY STRUCTURE OF MODEL AND NATURAL RUMENS -
SCREENING FOR ANTIBIOTIC RESISTANCE IN ANAEROBIC BACTERIA FROM SWINE FECES AND WASTE STORAGE PITS -
ANALYSES OF ANTIBIOTIC RESISTANCE IN ANAEROBIC BACTERIA FROM SWINE FECES AND WASTE PITS -
GROUP SPECIFIC AMPLIFIED RIBOSOMAL-DNA RESTRICTION ANALYSIS TO EVALUATE MICROBIAL COMMUNITY CHANGES AMONG SWINE FECES AND STORAGE PIT SAMPLES -
DEVELOPMENT OF MOLECULAR METHODS FOR IDENTIFICATION OF STREPTOCOCCUS BOVIS FROM HUMAN AND RUMINAL ORIGINS -
STREPTOCOCCUS BOVIS MENINGITIS IN AN INFANT -
PHYLOGENETIC DIVERSITY OF METHANOGENIC ARCHAEBACTERIA IN SWINE WASTE STORAGE PITS -
ANALYSES OF MICROBIAL DIVERSITY OF SWINE FECES AND WASTE HANDLING PITS USING 16S PCR AND PURE CULTURE ISOLATION -
PRODUCTION OF LACTATE FROM HEXOSE AND PENTOSE SUGARS USING RECOMBINANT ESCHERICHIA COLI -
WHO'S THERE?-COMMUNITY ANALYSES OF BACTERIA IN SWINE FECES AND WASTE HANDLING PITS USING PCR AND PURE CULTURE ISOLATION -
ISOLATION AND CHARACTERIZATION OF THE MICROBIAL POPULATIONS OF SWINE WASTE -
CHARACTERIZATION OF MICROBIAL POPULATIONS IN SWINE FECES AND WASTE HANDLING PITS BY 16S RDNA SEQUENCE ANALYSES -
USE OF 16S RDNA SEQUENCES TO IDENTIFY PREDOMINANT BACTERIA FROM PORCINE FECES AND WASTE HANDLING PITS -
ISOLATION AND CHARACTERIZATION OF A NEW SPECIES OF XYLANOLYTIC BACTERIUM FROM THE BOVINE RUMEN -
CLONING, EXPRESSION AND SEQUENCING OF AN ADENYLATE CYCLASE GENE FROM THE RUMINAL ANAEROBIC BACTERIUM, PREVOTELLA RUMINICOLA -
DEGRADATION OF CORN FIBER XYLAN BY A RUMINAL PREVOTELLA SP. ISOLATED FROM RUMEN ENRICHMENT CULTURES -
IDENTIFICATION OF A NOVEL ADENYLATE CYCLASE IN THE RUMINAL ANAEROBE, PREVOTELLA RUMINICOLA D31D -
COMPLEMENTATION OF AN ESCHERICHIA COLI ADENYLATE CYCLASE MUTANT WITH A GENE FROM PREVOTELLA RUMINICOLA D31D -
IDENTIFICATION OF A BIFUNCTIONAL XYLOSIDASE/ARABINOSIDASE IMPORTANT FOR XYLOOLIGOSACCHARIDE FERMENTATION BY THE RUMINAL ANAEROBE SELENOMONAS RUMINANTIUM GA192 -
USE OF THE BACTEROIDES OVATUS XSA GENE AS A TRANSCRIPTIONAL REPORTER GENE FOR VARIOUS GRAM-NEGATIVE ANAEROBES AND ESCHERICHIA COLI -
IDENTIFICATION OF A BIFUNCTIONAL XYLOSIDASE/ARABINOSIDASE IMPORTANT FOR XYLOOLIGOSACCHARIDE FERMENTATION BY THE RUMINAL ANAEROBE SELENOMONAS RUMINANTIUM GA192 -
DEVELOPMENT OF A NOVEL BIFUNCTIONAL BACTEROIDES GENE AS A TRANSCRIPTIONAL REPORTER GENE FOR GRAM-NEGATIVE ANAEROBES AND ESCHERICHIA COLI -
XYLOOLIGOSACCHARIDE UTILIZATION BY THE RUMINAL ANAEROBIC BACTERIUM, SELENOMONAS RUMINANTIUM -
DEVELOPMENT OF A NOVEL BACTEROIDES GENE AS A TRANSCRIPTIONAL REPORTER GENE FOR GRAM-NEGATIVE ANAEROBES AND ESCHERICHIA COLI -
ISOLATION AND CHARACTERIZATION OF A XYLANOLYTIC BACTERIUM CAPABLE OF FERMENTING CORN FIBER XYLAN -
IDENTIFICATION OF A BIFUNCTIONAL XYLOSIDASE/ARABINOSIDASE IMPORTANT FOR XYLOOLIGOSACCHARIDE FERMENTATION BY THE RUMINAL ANAEROBE SELENOMONAS RUMINANTIUM -
DEVELOPMENT OF A BIFUNCTIONAL XYLOSIDASE/ARABINOSIDASE GENE AS A REPORTER GENE FOR THE GRAM-NEGATIVE ANAEROBES BACTEROIDES AND PORPHYROMONAS, AND ESCHERICHIA COLI -
XYLOOLIGOSACCHARIDE UTILIZATION BY THE RUMINAL BACTERIUM, SELENOMONAS RUMINANTIUM -
INTERRUPTED CATALYTIC DOMAIN STRUCTURES IN XYLANASES FROM TWO DISTANTLY RELATED STRAINS OF PREVOTELLA RUMINICOLA -
CLONING, SEQUENCE AND EXPRESSION OF THE L-(+) LACTATE DEHYDROGENASE OF STREPTOCOCCUS BOVIS -
SURVIVAL OF THE RECOMBINANT BACTEROIDES THETAIOTAOMICRON STRAIN BTX IN IN VITRO RUMEN INCUBATIONS -
CASE REPORT: STREPTOCOCCUS BOVIS SEPTIC ARTHRITIS IN A DAIRY FARMER -
HETEROLOGOUS EXPRESSION OF FIBER-DEGRADING ENZYMES IN STREPTOCOCCUS BOVIS -
EVALUATION OF RUMINAL MICROBIAL POPULATION CHANGES DURING ACIDOSIS USING RIBOSOMAL RNA-TARGETED DNA PROBES -
IMPROVED ELECTROPORATION PROTOCOL AND VECTORS FOR STREPTOCOCCUS BOVIS -
DEVELOPMENT OF A BIFUNCTIONAL XYLOSIDASE/ARABINOSIDASE GENE AS A REPORTER GENE FOR THE GRAM-NEGATIVE ANAEROBES BACTEROIDES AND PORPHYROMONAS AND ESCHERICHIA COLI -
CLONING, EXPRESSION, AND SEQUENCE OF THE L-LACTATE DEHYDROGEANSE (LDH) GENE OF STREPTOCOCCUS BOVIS -
PHYLOGENETICALLY-BASED PROBES FOR THE STUDY OF RUMEN MICROBIAL POPULATIONS -
COMPARISON BETWEEN MICROBIAL POPULATIONS IN THE RUMEN AND CONTINUOUS CULTURE FERMENTERS USING RIBOSOMAL RNA-TARGETED DNA PROBES -
CLONING, EXPRESSION, AND SEQUENCING OF AN ARABINOFURANOSIDASE GENE FROM THE RUMINAL ANAEROBE BUTYRIVIBRIO FIBRISOLVENS H17C -
EXPRESSION OF CLONED POLYSACCHARIDASE GENES FROM THE RUMEN ANAEROBIC BACTERIUM RUMINOCOCCUS FLAVEFACIENS IN LACTIC ACID BACTERIA -
EXPRESSION OF A CLONED CELLULASE/XYLANASE GENE FROM PREVOTELLA RUMINICOLA IN BACTEROIDES VULGATUS, BACTEROIDES UNIFORMIS AND PREVOTELLA RUMINICOLA -
DIFFERENTIATION OF RUMINAL AND HUMAN STREPTOCOCCUS BOVIS STRAINS BY DNA HOMOLOGY AND 16S RRNA PROBES -
NUCLEOTIDE SEQUENCES OF XYLAN-INDUCIBLE XYLANASE AND XYLOSIDASE/ ARABINOSIDASE GENES FROM BACTEROIDES OVATUS V975 -
Last Modified: 8/26/2016
Footer Content Back to Top of Page