Jason W Abernathy
(PhD)
Harry K. Dupree Stuttgart National Aquaculture Research Cntr
Research Physiologist (Animals)
Phone: (870) 672-8278
Fax: (870) 673-7710
2955 HWY 130 EAST
STUTTGART, AR 72160
Publications
(Clicking on the reprint icon
will take you to the publication reprint.)
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Proteome analysis of virulent Aeromonas hydrophila reveals the upregulation of iron acquisition systems in the presence of a xenosiderophore
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(Peer Reviewed Journal)
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Differential susceptibility of white bass (Morone chrysops), striped bass (Morone saxatilis) and hybrid striped bass (M. chrysops x M. saxatilis) to Flavobacterium columnare and effects of mucus on bacterial growth and bio
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(Peer Reviewed Journal)
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Farmer, B.D., Fuller, S.A., Beck, B.H., Abernathy, J.W., Lange, M.D., Webster, C.D. 2020. Differential susceptibility of white bass (Morone chrysops), striped bass (Morone saxatilis) and hybrid striped bass (M. chrysops x M. saxatilis) to Flavobacterium columnare and effects of mucus on bacterial growth and biofilm development. Journal of Fish Diseases. p. 1-9. https://doi.org/10.1111/jfd.13272.
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Aeromonas hydrophila stimulated with deferoxamine mesylate LC-MSMS
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USDA-ARS Stuttgart update of genetic and genomic resources contributing to hybrid striped bass aquaculture
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(Abstract Only)
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Abernathy, J.W., Rawles, S.D., McEntire, M.E. 2020. USDA-ARS Stuttgart update of genetic and genomic resources contributing to hybrid striped bass aquaculture [abstract]. 2020 North Carolina Aquaculture Development Conference, March 12-14, 2020, New Bern, North Carolina. p.1.
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Investigations in producing sterile sunshine bass
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(Abstract Only)
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Straus, D.L., Kelly, A.M., Quintero, H.E., Abernathy, J.W. 2020. Investigations in producing sterile sunshine bass [abstract]. Book of Abstracts Aquaculture America 2020, February 9-12, 2020, Honolulu, Hawaii. p. 641.
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Development and evaluation of white bass Morone chrysops genetic resources toward the selective improvement of hybrid striped bass
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(Abstract Only)
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Abernathy, J.W., Rawles, S.D., McEntire, M.E. 2020. Development and evaluation of white bass Morone chrysops genetic resources toward the selective improvement of hybrid striped bass [abstract]. Aquaculture America 2020, February 9-12, 2020, Honolulu, Hawaii. p. 7.
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Off-season spawning of white bass Morone chrysops and their selective improvement toward building a better hybrid striped bass Morone chrysops x M. saxatilis
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(Abstract Only)
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McEntire, M.E., Abernathy, J.W., Rawles, S.D. 2020. Off-season spawning of white bass Morone chrysops and their selective improvement toward building a better hybrid striped bass Morone chrysops x M. saxatilis [abstract]. Aquaculture America 2020, February 9-12, 2020, Honolulu, Hawaii. p. 435.
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Vertebrate mucus stimulates biofilm development and upregulates iron acquisition genes in Flavobacterium columnare
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(Peer Reviewed Journal)
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Lange, M.D., Farmer, B.D., Abernathy, J.W. 2019. Vertebrate mucus stimulates biofilm development and upregulates iron acquisition genes in Flavobacterium columnare. Journal of Fish Diseases. https://doi.org/10.1111/jfd.13103.
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Alternative gene splicing in catfish after treatment with copper sulfate and exposure to Flavobacterium columnare
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Gene expression profiling of catfish after treatment with copper sulfate and exposure to Flavobacterium columnare
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Evaluation of Flavobacterium columnare DnaK recombinant protein vaccine as a means of protection against columnaris disease in channel catfish, Ictalurus punctatus
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(Peer Reviewed Journal)
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Lange, M.D., Abernathy, J.W., Farmer, B.D. 2019. Evaluation of Flavobacterium columnare DnaK recombinant protein vaccine as a means of protection against columnaris disease in channel catfish, Ictalurus punctatus. Frontiers in Immunology. p. 1-13. https://doi.org/10.3389/fimmu.2019.01175.
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Effect of aeration and oxygenation on growth and survival of rainbow trout in a commercial serial-pass, flow-through raceway system
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(Peer Reviewed Journal)
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Welker, T.L., Overturf, K.E., Abernathy, J.W. 2019. Effect of aeration and oxygenation on growth and survival of rainbow trout in a commercial serial-pass, flow-through raceway system. Aquaculture Report. 14:1-9. https://doi.org/10.1016/j.aqrep.2019.100194.
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Development and enhancement of white bass Morone chrysops resources for genetic improvement of hybrid striped bass
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(Abstract Only)
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Abernathy, J.W., Anderson, L.K., Rawles, S.D., Schilling, J., Fuller, S.A., McEntire, M.E., Reading, B.J., Beck, B.H., Peatman, E. 2019. Development and enhancement of white bass Morone chrysops resources for genetic improvement of hybrid striped bass [abstract]. Aquaculture 2019, March 7-11, 2019, New Orleans, Louisana. p. 10.
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Catfish mucus changes the Flavobacterium columnare transcriptome
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(Abstract Only)
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Lange, M.D., Abernathy, J.W., Farmer, B.D. 2019. Catfish mucus changes the Flavobacterium columnare transcriptome [abstract]. Aquaculture 2019, March 7-11, 2019, New Orleans, Louisana. p. 602.
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Fish and porcine mucus stimulate F. columnare biofilm formation
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(Abstract Only)
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Farmer, B.D., Lange, M.D., Abernathy, J.W. 2019. Fish and porcine mucus stimulate F. columnare biofilm formation [abstract]. Aquaculture 2019, March 7-11, 2019, New Orleans, Louisana. p. 349.
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The striped bass Morone saxatilis genome sequence assembly
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(Abstract Only)
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Anderson, L.K., Baltzegar, D.A., Fuller, S.A., Abernathy, J.W., Reading, B.J. 2019. The striped bass Morone saxatilis genome sequence assembly. Aquaculture 2019, March 7-11, 2019, New Orleans, Louisana. p. 50.
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Minimizing fishmeal use in hybrid striped bass (Morone chrysops x Morone saxatilis) diets using commercial protein concentrates designed for aquafeeds
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(Abstract Only)
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Mccann, K., Rawles, S.D., Lochmann, R., Gaylord, T., Sealey, W., Abernathy, J.W. 2019. Minimizing fishmeal use in hybrid striped bass (Morone chrysops x Morone saxatilis) diets using commercial protein concentrates designed for aquafeeds. Aquaculture America [abstract]. Aquaculture 2019, March 7-11, 2019, New Orleans, Louisana. p. 702.
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Novel protein-based therapy for the managing disease that stimulates catfish antimicrobial immunity and tissue repair system
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(Abstract Only)
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Dolan, M.C., Elkins, L., Lange, M.D., Abernathy, J.W. 2018. Novel protein-based therapy for the managing disease that stimulates catfish antimicrobial immunity and tissue repair system [abstract]. 99th Conference of Research Workers in Animal Diseases, December 2-4, 2018, Chicago, Illinois. PO52.
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Gene expression profiling of catfish after treatment with Flavobacterium columnare DnaK protein
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Abernathy, J.W., Lange, M.D. 2019. Gene expression profiling of catfish after treatment with Flavobacterium columnare DnaK protein. Genbank Accession No. GSE121116.
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Fish mucus alters the Flavobacterium columnare biofilm transcriptome
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(Abstract Only)
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Lange, M.D., Farmer, B.D., Abernathy, J.W. 2018. Fish mucus alters the Flavobacterium columnare biofilm transcriptome [abstract]. Meeting Abstract, 5th International Conference on members of the genus Flavobacterium, November 27-29, 2018, Nara, Japan. p. 41.
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Catfish mucus alters the Flavobacterium columnare transcriptome
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(Peer Reviewed Journal)
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Lange, M.D., Abernathy, J.W., Farmer, B.D. 2018. Catfish mucus alters the Flavobacterium columnare transcriptome. FEMS Microbiology Letters. 365(22)1-13. https://doi.org/10.1093/femsle/fny244.
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SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops)
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(Peer Reviewed Journal)
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Zhao, H., Fuller, S.A., Thongda, W., Abernathy, J.W., Beck, B.H., Peatman, E. 2018. SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops). Animal Genetics. 50(1):92-96. https://doi.org/10.1111/age.12747.
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SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops)
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Zhao, H., Fuller, S.A., Thongda, W., Abernathy, J.W., Beck, B.H., Peatman, E. 2018. SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops). Genbank. Acession # SRP151393.
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SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops)
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Zhao, H., Fuller, S.A., Thongda, W., Abernathy, J.W., Beck, B.H., Peatman, E. 2018. SNP panel development for genetic management of wild and domesticated white bass (Morone chrysops). Genbank. Acession # SRP151437.
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Development of SNP panels for population genetics analyses of domestic and wild white bass (Morone chrysops)
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(Abstract Only)
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Zhao, H., Fuller, S.A., Thongda, W., Abernathy, J.W., Beck, B.H., Peatman, E. 2018. Development of SNP panels for population genetics analyses of domestic and wild white bass (Morone chrysops)[abstract]. Southeastern Association of Fish and Wildlife Agencies Conference, October 21-24, 2018, Mobile, Alabama. p. 1.
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Coordinated effort to advance genomes-to-phenomes through the integration of bioinformatics with aquaculture research
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(Abstract Only)
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Abernathy, J.W., Fuller, S.A., Green, B.W., Lange, M.D., Rawles, S.D., Straus, D.L., Webster, C.D. 2018. Coordinated effort to advance genomes-to-phenomes through the integration of bioinformatics with aquaculture research [abstract]. Meeting Abstract, 4th Annual Meeting of the Arkansas Bioinformatics Consortium AR-BIC 2018, April 23-24th, 2018, Little Rock, Arkansas. p. 45.
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Fish mucus alters the Flavobacterium columnare transcriptome
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(Abstract Only)
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Lange, M.D., Farmer, B.D., Abernathy, J.W. 2018. Fish mucus alters the Flavobacterium columnare transcriptome [abstract]. Meeting Abstract, 4th Annual Meeting of the Arkansas Bioinformatics Consortium AR-BIC 2018,April 23-24th, 2018, Little Rock, ARkansas. p. 56.
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Heritability of growth traits and correlation with hepatic gene expression among hybrid striped bass exhibiting extremes in performance
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(Peer Reviewed Journal)
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Fuller, S.A., Beck, B.H., McEntire, M.E., Peatman, E., Abernathy, J.W. 2018. Heritability of growth traits and correlation with hepatic gene expression among hybrid striped bass exhibiting extremes in performance. Cogent Biology. 4:1453319.
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Gene expression analysis between planktonic and biofilm states of Flavobacterium columnare
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Abernathy, J.W., Lange, M.D. 2018. Gene expression analysis between planktonic and biofilm states of Flavobacterium columnare. Genbank. Accession # GSE109937.
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Effect of water source and trout strain on expression of stress-affected genes in a commercial setting
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(Peer Reviewed Journal)
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Welker, T.L., Overturf, K.E., Abernathy, J.W. 2018. Effect of water source and trout strain on expression of stress-affected genes in a commercial setting. North American Journal of Aquaculture. 80(3):249-262. https://doi.org/10.1002/naaq.10028.
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Effects of feed processing method (extrusion and expansion-compression pelleting) on water quality and growth of rainbow trout in a commercial setting
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(Peer Reviewed Journal)
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Welker, T.L., Overturf, K.E., Snyder, S., Liu, K., Abernathy, J.W., Frost, J.B., Barrows, F. 2018. Effects of feed processing method (extrusion and expansion-compression pelleting) on water quality and growth of rainbow trout in a commercial setting. Journal of Applied Aquaculture. 30(2):97-124. https://doi.org/10.1080/10454438.2018.1433095.
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Assessment of hepatic gene expression between hybrid striped bass exhibiting extremes in growth performance
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(Abstract Only)
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Abernathy, J.W., Fuller, S.A., Beck, B.H., Peatman, E., McEntire, M.E. 2018. Assessment of hepatic gene expression between hybrid striped bass exhibiting extremes in growth performance [abstract]. Aquaculture America, February 19-22, 2018, Las Vegas, Nevada. p. 7.
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Integrative functional analyses using rainbow trout selected for tolerance to plant diets reveal nutrigenomic signatures for soy utilization without the concurrence of enteritis
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(Peer Reviewed Journal)
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Abernathy, J.W., Brezas, A., Snekvik, K., Hardy, R., Overturf, K.E. 2017. Integrative functional analyses using rainbow trout selected for tolerance to plant diets reveal nutrigenomic signatures for soy utilization without the concurrence of enteritis. PLoS One. 12(7). https://doi.org/10.1371/journal.pone.0180972.
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Optimization of dietary manganese for rainbow trout, Oncorhynchus mykiss, fed a plant-based diet
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(Peer Reviewed Journal)
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Welker, T.L., Barrows, F., Overturf, K.E., Gaylord, G., Abernathy, J.W. 2018. Optimization of dietary manganese for rainbow trout, Oncorhynchus mykiss, fed a plant-based diet. Journal of the World Aquaculture Society. 49(1):71-82. https://doi.org/10.1111/jwas.12447.
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Hepatic gene expression analysis between low and high growing hybrid striped bass
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Abernathy, J.W., Fuller, S.A. 2018. Hepatic gene expression analysis between low and high growing hybrid striped bass. National Center for Biotechnology Information (NCBI). Accession # GSE97547.
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Gene expression analysis among rainbow trout selected for increased biosynthesis and muscle deposition of omega-3 fatty acids when fed plant protein and plant oil formulated feeds
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Probiotic legacy on gut microbial assembly in fish larvae
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(Peer Reviewed Journal)
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Giatsis, C., Ramiro-Garcia, J., Abernathy, J.W., Verreth, J., Smidt, H., Sipkema, D., Verdegem, M. 2016. Probiotic legacy on gut microbial assembly in fish larvae. Scientific Reports. 6:33965.
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Gene expression profiling of long non-coding RNAs between rainbow trout strains fed plant-based diets
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Gene expression analysis between rainbow trout strains with different susceptibility to enteritis when reared on plant-based diets
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Global study of probiotic effect on gut microbial communities in fish larvae
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Global study of microbial communites in tilipia gut fed sludge-infused diets
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Comparison of ribosomal RNA removal methods for transcriptome sequencing workflows in teleost fish
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(Peer Reviewed Journal)
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Abernathy, J.W., Overturf, K.E. 2016. Comparison of ribosomal RNA removal methods for transcriptome sequencing workflows in teleost fish. Journal of Animal Science and Biotechnology. 27(1):60-65.
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Short-term feeding cessation prior to harvest does not affect fillet yield in rainbow trout
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(Peer Reviewed Journal)
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Welker, T.L., Overturf, K.E., Barrows, F., Abernathy, J.W., Snyder, S.G., Lapatra, S.E. 2015. Short-term feeding cessation prior to harvest does not affect fillet yield in rainbow trout. Annals of Aquaculture and Research. 2(2):1011.
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