Page Banner

United States Department of Agriculture

Agricultural Research Service

Related Topics

Jamie A O`rourke
Corn Insects and Crop Genetics Research
Genetics

Phone: (515) 294-7824
Fax: (515) 294-9359

IOWA STATE UNIVERSITY
1575 AGRONOMY BLDG
AMES , IA 50011

Projects
Functional and Structural Genetic Analysis of Soybean and Other Legumes
In-House Appropriated (D)
  Accession Number: 425285
Iron Deficiency Chlorosis: Getting to the Root of the Problem
Reimbursable Cooperative Agreement (R)
  Accession Number: 430246

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Fast neutron induced structural rearrangements at a soybean NAP1 locus result in gnarled trichomes -
Campbell, B.W., Hofstad, A., Sreekanta, S., Fu, F., Koono, T., O'Rourke, J.A., Vance, C.P., Muehlbauer, G.J., Stupar, R. 2016. Fast neutron induced structural rearrangements at a soybean NAP1 locus result in gnarled trichomes. Theoretical and Applied Genetics. doi: 1007/S00122-016-2735-x.
Virus-induced gene silencing and transient gene expression in soybean using Bean pod mottle virus infectious clones -
Whitham, S.A., Lincoln, L.M., Chowda-Reddy, R., Dittman, J.D., O'Rourke, J.A., Graham, M.A. 2016. Virus-induced gene silencing and transient gene expression in soybean using Bean pod mottle virus infectious clones. Current Protocols in Plant Biology. doi:10.1002/cppb.20012.
Transgene silencing of sucrose synthase in alfalfa (Medicago sativa L.) stem vascular tissue suggests a role for invertase in cell wall cellulose synthesis -
Samac, D.A., Bucciarelli, B., Miller, S.S., Yang, S.H., O'Rourke, J.A., Shin, S., Vance, C.P. 2015. Transgene silencing of sucrose synthase in alfalfa (Medicago sativa L.) stem vascular tissue suggests a role for invertase in cell wall cellulose synthesis. Biomed Central (BMC) Plant Biology. 15:283. doi:10.1186/s12870-015-0649-4.
The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies -
O'Rourke, J.A., Fu, F., Bucciarelli, B., Yang, S.S., Samac, D.A., Lamb, J.F., Monteros, M., Graham, M.A., Gronwald, J.W., Krom, N., Li, J., Dai, X., Zhao, P.X., Vance, C.P. 2015. The Medicago sativa gene index 1.2: a web-accessible gene expression atlas for investigating expression differences between Medicago sativa subspecies. BioMed Central (BMC) Genetics. 16:502. DOI: 10.1186/s12864-015-1718-7.
Genetic and physical map correlation -
O'Rourke, J.A. 2014. Genetic and physical map correlation. Popular Publication. doi: 10.1002/9780470015902.a0000819.pub3.
Transgene silencing of sucrose synthase in alfalfa stem vascular tissue by a truncated phosphoenolpyruvate carboxylase: sucrose synthase construct -
Gronwald, J.W., Yang, S.H., Bucciarelli, B., Miller, S.S., O'Rourke, J.A., Shin, S., Samac, D.A., Vance, C.P. 2014. Transgene silencing of sucrose synthase in alfalfa stem vascular tissue by a truncated phosphoenolpyruvate carboxylase: sucrose synthase construct. Plant Biology. July 12-16, 2014. Portland, OR.
Legume genomics: Understanding biology through DNA and RNA sequencing -
O'Rourke, J.A., Bolon, Y., Bucciarelli, B., Vance, C.P. 2014. Legume genomics: Understanding biology through DNA and RNA sequencing. Annals Of Botany. 113(7):1107-1120.
The Medicago sativa Gene Index 1.2: A web-accessible expression atlas of two Medicago sativa sub-species -
Fu, F., O'Rourke, J.A., Bucciarelli, B., Yang, S.S., Samac, D.A., Lamb, J.F., Krom, N., Zhao, P.X., Gronwald, J.W., Vance, C.P. 2013. The Medicago sativa Gene Index 1.2: A web-accessible expression atlas of two Medicago sativa sub-species. Cold Spring Harbor Meeting on Genome Informatics. October 30 - November 2, 2013. Cold Spring Harbor, NY.
A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar Reprint Icon -
O'Rourke, J.A., Iniguez, L.P., Bucciarelli, B., Roessler, J., Schumtz, J., McClean, P., Jackson, S.A., Hernandez, G., Graham, M.A., Stupar, R.M., Vance, C.P. 2013. A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar. Frontiers in Plant Genetics and Genomics. DOI:10.3389/fpls.2013.00210.
Transcriptome analyses and virus induced gene silencing identify genes in the Rpp4-mediated Asian soybean rust resistance pathway -
Morales, A., O'Rourke, J.A., Van De Mortel, M., Schneider, K., Bancroft, T., Borem, A., Nelson, R., Nettleton, D., Baum, T., Shoemaker, R.C., Frederick, R.D., Abdelnoor, R.V., Pedley, K.F., Whitham, S.A., Graham, M.A. 2013. Transcriptome analyses and virus induced gene silencing identify genes in the Rpp4-mediated Asian soybean rust resistance pathway. Functional Plant Biology. DOI:10.1071/FP12296.
An RNA-seq transcriptome analysis of orthophosphate-deficient white lupin reveals novel insights into phosphorus acclimation in plants -
O'Rourke, J.A., Yang, S.H., Miller, S.S., Bucciarelli, B., Liu, J., Rydeen, A., Uhde-Stone, C., Tu, Z., Allan, D., Gronwald, J.W., Vance, C.P. 2012. An RNA-seq transcriptome analysis of orthophosphate-deficient white lupin reveals novel insights into phosphorus acclimation in plants. Plant Physiology. 161(1):705-724.
Investigating nitrogen deficiency in common beans -
O'Rourke, J.A., Iniguez, L.P., Bucciarelli, B., Woodey, J.L., Shoemaker, R.C., Graham, M.A., Cannon, S.B., Mcclean, P.E., Jackson, S.A., Hernandez, G., Vance, C.P. 2012. Investigating nitrogen deficiency in common beans [abstract]. Molecular & Cellular Biology of the Soybean Conference, August 12-15, 2012, Des Moines, Iowa. Available: http://www.extension.iastate.edu/registration/events/soybean/speakeranchor.htm#speaker16.
The transcriptome of common bean: nodules to beans -
O'Rourke, J.A., Iniguez, L.P., Bucciarelli, B., Woody, J.L., McClean, P.E., Jackson, S.A., Shoemaker, R.C., Hernandez, G., Vance, C.P. 2011. The transcriptome of common bean: nodules to beans [abstract]. XIV National Congress of Biochemistry and Plant Molecular Biology and 7th Symposium Mexico - USA, November 29-December 2, 2011, Campeche, Mexico. p. 17.
Transcriptome of common bean (Phaseolus vulgaris) through RNA-seq: nodulation, symbiotic nitrogen fixation, transcription factors -
Hernandez, G., Iniguez, L.P., O'Rourke, J.A., McClean, P., Shoemaker, R.C., Jackson, S., Vance, C.P. 2012. Transcriptome of common bean (Phaseolus vulgaris) through RNA-seq: nodulation, symbiotic nitrogen fixation, transcription factors [abstract]. Plant and Animal Genome XX Conference, January 14-18, 2012, San Diego, California. Available: http://pag.confex.com/pag/xx/webprogram/Paper1559.html.
The transcriptome of common bean: more than nodulation -
O'Rourke, J.A., Iniguez, L.P., Bucciarelli, B., Woodey, J.L., McClean, P.E., Jackson, S.A., Shoemaker, R.C., Hernandez, G., Vance, C.P. 2011. The transcriptome of common bean: more than nodulation [abstract]. Plant Biology 2011, American Society of Plant Biologists Annual Meeting, August 6-10, 2011, Minneapolis, Minnesota. Available: http://abstracts.aspb.org/pb2011/public/M20/M2003.html.
Identifying genes involved in nodulation and symbiotic nitrogen fixation (SNF) in Phaseolus vulgaris using RNAseq technology -
Iniguez, L.P., O'Rourke, J.A., Bucciarelli, B., Woodey, J.L., Shoemaker, R.C., Hernandez, G., Vance, C.P. 2011. Identifying genes involved in nodulation and symbiotic nitrogen fixation (SNF) in Phaseolus vulgaris using RNAseq technology [abstract]. Plant Biology 2011, American Society of Plant Biologists Annual Meeting, August 6-10, 2011, Minneapolis, Minnesota. Available: http://abstracts.aspb.org/pb2011/public/P15/P15030.html.
An integrative approach to genomic introgression mapping -
Severin, A.J., Peiffer, G., Xu, W.W., Hyten, D.L., Bucciarelli, B., O'Rourke, J.A., Bolon, Y.E., Grant, D.M., Farmer, A.D., May, G.D., Vance, C.P., Shoemaker, R.C., Stupar, R.M. 2010. An integrative approach to genomic introgression mapping. Plant Physiology. 154(1):3-12.
Understanding the Regulation of Cell Wall Composition in Alfalfa -
O'Rourke, J.A., Tesfaye, M., Yang, S.H., Lamb, J.F., Jung, H.G., Vance, C.P., Samac, D.A. 2010. Understanding the Regulation of Cell Wall Composition in Alfalfa [abstract]. Plant and Animal Genome XVIII Conference, January 9-13, 2010, San Diego, California. Available: http://www.intl-pag.org/18/abstracts/P07c_PAGXVIII_799.html.
Last Modified: 5/2/2016
Footer Content Back to Top of Page