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United States Department of Agriculture

Agricultural Research Service

Related Topics

Congjun Li
Animal Genomics and Improvement Laboratory
General Biological Science

Phone: (301) 504-7216
Fax: (301) 504-8414
Room 216

10300 BALTIMORE AVENUE
ANIMAL GENOMICS AND IMPROVEMENT LAB
BLDG 306 BARC-EAST
BELTSVILLE , MD 207052350

Projects
Understanding Genetic and Physiological Factors Affecting Nutrient Use Efficiency of Dairy Cattle
Appropriated (D)
  Accession Number: 423564

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Long non-coding RNA ADNCR suppresses adipogenic differentiation by targeting miR-204 -
Li, M., Sun, X., Cai, H., Li, C., Sun, Y., Lan, C., Lin, F., Bai, Y., Chen, H. 2016. Long non-coding RNA ADNCR suppresses adipogenic differentiation by targeting miR-204. Genetics. S1874-9399(16)30083-9.
Transcriptomic sequencing reveals a set of unique genes activated by butyrate-induced histone modification -
Li, C., Li, R.W., Baldwin, R.L., Blomberg, L., Wu, S., Li, W. 2016. Transcriptomic sequencing reveals a set of unique genes activated by butyrate-induced histone modification. Scientific Reports. 10:1-8.
Impact of parental Bos taurus and Bos indicus origins on copy number variation in traditional Chinese cattle breeds -
Liangzhi, Z., Shan-Gang, J., Martin, P., Young-Zhen, H., Li, C., Chu-Zhao, L., Xin, Z., Hong, C. 2015. Impact of parental Bos taurus and Bos indicus origins on copy number variation in traditional Chinese cattle breeds. Scientific Reports. 10;7(8):2352-2361.
RNA-Seq analysis of glycosylation related gene expression in STZ-induced diabetic rat kidney -
Qian, X., Li, X., O Ilori, T., Klein, J.D., Hughey, R.P., Li, C., Abdel, A.A., Song, X., Chen, G. 2015. RNA-Seq analysis of glycosylation related gene expression in STZ-induced diabetic rat kidney. Frontiers in Physiology. doi: 10.3389/fphys.2015.00274.
Haplotypes in the promoter region of the CIDEC gene associated with growth traits in Nanyang cattle -
Wang, J., Hua, L., Pan, H., Zhang, L., Li, M., Huang, Y., Li, Z., Lan, X., Lei, C., Li, C., Chen, H. 2015. Haplotypes in the promoter region of the CIDEC gene associated with growth traits in Nanyang cattle. Scientific Reports. 5, 12075(2015).
Splice variants and regulatory networks associated with host resistance to the intestinal worm Cooperia oncophora in cattle -
Li, R.W., Wu, S., Li, C., Li, W., Schroeder, S.G. 2015. Splice variants and regulatory networks associated with host resistance to the intestinal worm Cooperia oncophora in cattle. Veterinary Parasitology. DOI:10.1016/j.vetpar.2015.05.010.
Effect of alpha-lipoic acid on boar spermatozoa quality during freezing-thawing -
Shen, T., Jiang, Z., Li, C., Hu, X., Li, Q. 2015. Effect of alpha-lipoic acid on boar spermatozoa quality during freezing-thawing. Zygote. p. 1-7(2015).
Altered microRNA expression in bovine skeletal muscle with age -
Sun, J., Sonstegard, T.S., Li, C., Yongzheng, H., Li, Z., Wang, J., Zhang, C., Lei, C., Zhao, X., Chen, H. 2015. Altered microRNA expression in bovine skeletal muscle with age. Scientific Reports. 46(3):227-238. DOI: 10.1111/age.12272.
Genome-wide DNA methylation profiles and their replationship with mRNA and the microRNA transcriptome in bovine muscle tissue (Bos Taurine) -
Huang, Y., Sun, J., Zhang, L., Li, C., Womark, J.E., Li, Z., Lan, X., Lei, C., Zhao, X., Chen, H. 2014. Genome-wide DNA methylation profiles and their replationship with mRNA and the microRNA transcriptome in bovine muscle tissue (Bos Taurine). Scientific Reports. 4:6546. DOI: 10.1038/srep06546.
Detection of copy number variations and their effects in Chinese bulls -
Zhang, L., Jia, S., Yang, M., Xu, Y., Li, C., Sun, J., Huang, Y., Lan, X., Lei, C., Zhou, Y., Zhang, C., Zhao, X., Chen, H. 2014. Detection of copy number variations and their effects in Chinese bulls, BMC Genomics 2014, 15:480.
Israeli acute paralysis virus: epidemiology, pathogenesis and implications for honey bee health and Colony Collapse Disorder (CCD) -
Chen, Y., Pettis, J.S., Corona, M.V., Chen, W., Spivak, M., Visscher, K.P., Hoffman, G.D., Boncristiani, H., Zhao, Y., Vanengelsdorp, D., Delaplane, K., Solter, L., Drummond, F., Kramer, M.H., Lipkin, I.W., Palacios, G., Hamilton, M.C., Smith Jr, I.B., Huang, S., Zheng, H., Li, J., Zhang, X., Zhou, A., Wu, L., Zhou, J., Lee, M.L., Teixeira, E.W., Li, Z., Evans, J.D., Li, C. 2014. Israeli acute paralysis virus: epidemiology, pathogenesis and implications for honey bee health and Colony Collapse Disorder (CCD). PLoS Pathogens. 10 (7):e1004261. DOI: 10.1371/journal.ppat.1004261.
A global view of the transcriptional profiling of adipose tissue in Chinese Qinchuan cattle using RNA sequencing -
Zhou, Y., Sun, J., Li, C., Wnag, Y., Cai, H., Lan, X., Lei, C., Che, H. 2014. A global view of the transcriptional profiling of adipose tissue in Chinese Qinchuan cattle using RNA sequencing. PLoS Genetics. 9(7):el101261.
Transcription factor ZBED6 mediates IGF2 gene expression by regulating promoter activity and DNA methylation in myoblasts -
Young-Zhen, H., Liangzhi, Z., Xin-Sheng, L., Yu-Jia, S., Li, C., Xian-Yong, L., Chu-Zhao, L., Chun-Lei, Z., Xin, Z., Hong, C. 2014. Transcription factor ZBED6 mediates IGF2 gene expression by regulating promoter activity and DNA methylation in myoblasts. Scientific Reports. 4:4570. DOI:10.1038/srep04570.
Transcriptional regulators transforming growth factor-beta 1 and estrogen-related receptor-alpha identified as putative mediators of calf rumen epithelial tissue development and function during weaning Reprint Icon -
Connor, E.E., Baldwin, R.L., Walker, M.P., Ellis, S., Li, C., Kahl, S., Chung, H., Li, R.W. 2014. Transcriptional regulators transforming growth factor-beta 1 and estrogen-related receptor-alpha identified as putative mediators of calf rumen epithelial tissue development and function during weaning. Journal of Dairy Science. 97:4193-4207.
A high-resolution whole-genome map of the distinctive epigenomic landscape induced by butyrate in bovine cells -
Shin, J., Xu, L., Li, R.W., Gao, Y., Bickhart, D.M., Liu, G., Baldwin, R.L., Li, C. 2014. A high-resolution whole-genome map of the distinctive epigenomic landscape induced by butyrate in bovine cells. Animal Genetics. 45:40–50. DOI:10.1111.age.12147.
Butyrate: A dietary inhibitor of histone deacetylases and an epigenetic regulator -
Li, C., Li, R.W., Baldwin, R.L., Elsasser, T.H. 2014. Butyrate: A dietary inhibitor of histone deacetylases and an epigenetic regulator. Butyrate: Food Sources, Functions and Health Benefits. New York, NY:Nova Science Publishers. p.233-258.
Bioinformatic dissecting of TP53 regulation pathway underlying butyrate-induced histone modification in epigenetic regulation -
Li, C., Li, R.W. 2014. Bioinformatic dissecting of TP53 regulation pathway underlying butyrate-induced histone modification in epigenetic regulation. Genetics and Epigenetics. Doi: 10.4137/GEG.S14176.
Identification and genetic effect of a variable duplication in the promoter region of the cattle ADIPOQ gene -
Zhang, L., Yang, M., Li, C., Xu, Y., Jia, S., Sun, J., Lan, X., Lei, C., Chen, H. 2013. Identification and genetic effect of a variable duplication in the promoter region of the cattle ADIPOQ gene. Animal Genetics. 45:171-179. DOI.10.1111/age.12112.
Epigenomic landscape modified by histone modification correlated with activation of IGF2 gene -
Carter, O.L., Li, R.W., Li, C. 2013. Epigenomic landscape modified by histone modification correlated with activation of IGF2 gene. BARC Poster Day. 1:10.
ChIp-seq of bovine cells (MDBK) to study butyrate-induced histone modification with 10 datasets -
Li, C., Li, R.W. 2014. ChIp-seq of bovine cells (MDBK) to study butyrate-induced histone modification with 10 datasets. NIH Gene Expression Omnibus Respository: (GEO Accession GSE38973).
DNA demethylation pathways: recent insights -
Li, C. 2013. DNA demethylation pathways: recent insights. Genetics and Epigenetics. 2013:5 43-49.
Molecular networks associated with host resistance to gastrointestional nematodes in cattle -
A 5'-regulatory region and two coding region polymorphisms modulate promoter activity and gene expression of the growth suppressor gene ZBED6 in cattle -
Yong-Zhen, H., Li, M., Wang, J., Womack, J.E., Sun, J., Li, C., Lan, X., Lei, C., Zhang, C., Chen, H. 2013. A 5'-regulatory region and two coding region polymorphisms modulate promoter activity and gene expression of the growth suppressor gene ZBED6 in cattle. PLoS One. 8(11):e79744.doi:10.1371/journal.pone.007974, 2013.
Short-term alpha- or gamma-delta-enriched tocopherol oil supplementation differentially effects the expression of proinflammatory mediators: selective impacts on characteristics of protein tyrosine nitration in vivo¿. -
Elsasser, T.H., Kahl, S., Lebold, K.M., Traber, M.G., Shaffer, J., Li, C., Block, S. 2013. Short-term alpha- or gamma-delta-enriched tocopherol oil supplementation differentially effects the expression of proinflammatory mediators: selective impacts on characteristics of protein tyrosine nitration in vivo. Veterinary Science Development. 3: 20-38.
Gene expression in bovine rumen epithelium during weaning indentifies molecular regulators of rumen development and growth Reprint Icon -
Connor, E.E., Baldwin, R.L. 6th , Li, C., Li, R.W., Chung, H. 2013. Gene expression in bovine rumen epithelium during weaning indentifies molecular regulators of rumen development and growth. Functional and Integrative Genomics. 13:133-142.
In vitro and in vivo study of transcriptome alternation induced by butyrate in cattle using deep RNA-seq -
Li, C., Li, R.W. 2013. In vitro and in vivo study of transcriptome alternation induced by butyrate in cattle using deep RNA-seq. Meeting Abstract. PAG XX Meeting.
Nutritional epigenomics -
Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array Reprint Icon -
Hou, Y., Bickhart, D.M., Hvinden, M.L., Li, C., Song, J., Boichard, D.A., Fritz, S., Eggen, A., Denise, S., Wiggans, G.R., Sonstegard, T.S., Van Tassell, C.P., Liu, G. 2012. Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array. Biomed Central (BMC) Genomics. 13:376.
Searching for Synbiotics to increase Colonic Butyrate Concentration -
Li, R.W., Li, C. 2012. Searching for Synbiotics to increase Colonic Butyrate Concentrations. In: Functional Foods and chronicle Inflammation; Science and practicaal application, Vol II (ed. D.M. Mastirosyan). pp. 69-71.
Epigenetics and environmental impacts in cattle -
Li, C., Li, R.W. 2013. Epigenetics and environmental impacts in cattle. Hauppauge, NY: Nova Science Publisher, Inc. 59-82 p.
RNA sequences of the bovine epithelial transcriptome -
Li, R.W., Li, C. 2012. RNA sequences of the bovine epithelial transcriptome. National Center for Biotechnology Information (NCBI). SRX130570.
Comparative analyses of transcriptomic profiles of the bovine small intestine in response to both a primary infection and a drug-attenuated reinfection -
Li, R.W., Li, C., Gasbarre, L.C. 2012. Comparative analyses of transcriptomic profiles of the bovine small intestine in response to both a primary infection and a drug-attenuated reinfection . NIH Gene Expression Omnibus (GEO) Database. GSE24402.
Complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle -
Li, R.W., Hou, Y.L., Li, C., Gasbarree, L.C. 2012. Complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle. NIH Gene Expression Omnibus (GEO) Database. 190:1-11.2012.
Alternate splicing regulated by butyrate in the bovine epithelial cell -
Wu, S., Li, C., Huang, W., Li, W., Li, R.W. 2012. Alternate splicing regulated by butyrate in the bovine epithelial cell. PLoS One. 7(6):e39182.
Quantification of transcriptome responses of the rumen epithelium to butyrate infusion -
Baldwin, R.L., Wu, S., Li, W., Li, C., Bequette, B.J., Li, R.W. 2012. Quantification of transcriptome responses of the rumen epithelium to butyrate infusion. Gene Regulation and Systems Biology. 6:67–80.
The bacterial community composition of the bovine rumen detected using pyrosequencing of 16S rRNA genes -
Wu, S., Baldwin, R.L., Li, W., Li, C., Connor, E.E., Li, R.W. 2012. The bacterial community composition of the bovine rumen detected using pyrosequencing of 16S rRNA genes. Metagenomics. 1:11. DOI:10.4303/mg/235571.
Effects of short-term tocopherol (T) feeding on structure-localized protein tyrosine nitration (pTN) patterns of mitochondrial ATPase following endotoxin (LPS) challenge in beef calves. -
Elsasser, T.H., Kahl, S., Castellano-Perez, R., Li, C., Block, S. 2012. Effects of short-term tocopherol (T) feeding on structure-localized protein tyrosine nitration (pTN) patterns of mitochondrial ATPase following endotoxin (LPS) challenge in beef calves. Journal of Animal Science. 88 (Suppl. 2):591.
Butyrate induced IGF2 activation correlated with distinct chromatin landscapes due to histone modification Reprint Icon -
Shin, J., Li, R.W., Goa, Y., Bickhart, D.M., Liu, G., Li, W., Wu, S., Li, C. 2013. Butyrate induced IGF2 activation correlated with distinct chromatin landscapes due to histone modification. PLoS Genetics. DOI:10.4137/GRSB.S11243.
Transcriptome characterization by deep-RNA-sequencing underlies the mechanisms of butyrate-induced epigenomic regulation in bovine cells -
Sitao, W., Li, R.W., Li, W., Li, C. 2012. Transcriptome characterization by deep-RNA-sequencing underlies the mechanisms of butyrate-induced epigenomic regulation in bovine cells. PLoS One. DOI:10.1371/journal.pone.0036940.
Characterization of differentially expressed genes in calf rumen epithelium in response to weaning -
Chung, H., Baldwin, R.L., Li, C., Connor, E.E. 2012. Characterization of differentially expressed genes in calf rumen epithelium in response to weaning. BARC Poster Day. p. 05.
Characterization of the longissimus lumborum transcriptome response to adding propionate to the diet of growing Angus beef steers -
Baldwin, R.L., Li, R.W., Li, C., Song, J., Bequette, B.J. 2012. Characterization of the longissimus lumborum transcriptome response to adding propionate to the diet of growing Angus beef steers. Physiological Genomics. 44:543-550. DOI:10.1152/physiolgenomics.
Transcriptomic alterations in human prostate cancer cell LNCaP tumor xenograft modulated by dietary phenethyl isothiocyanate -
Li, R.W., Li, C., Wang, T.T. 2012. Transcriptomic alterations in human prostate cancer cell LNCaP tumor xenograft modulated by dietary phenethyl isothiocyanate. Molecular Carcinogenesis. DOI: 10.1002/mc.21873.
Genome-wide ChIP-seq mapping and analysis of butyrate-induced H3K9 and H3K27 acetylation and epigenomic landscape alteration in bovine cells Reprint Icon -
Heon Shin, J., Li, R.W., Gao, Y., Baldwin, R.L., Li, C. 2012. Genome-wide ChIP-seq mapping and analysis of butyrate-induced H3K9 and H3K27 acetylation and epigenomic landscape alteration in bovine cells. Functional and Integrative Genomics. 12(1):119-130.
Perturbation dynamics of the rumen microbiota in response to exogenous butyrate -
Li, R.W., Wu, S., Li, W., Baldwin, R.L., Li, C. 2012. Perturbation dynamics of the rumen microbiota in response to exogenous butyrate. Public Library of Science Biology. 7(1):e29392. DOI:10.1371/journal.pone.0029392.
Genome-wide ChIP-seq mapping and analysis of butyrate-induced H3K9 and H3K27 acetylation and epigenomic landscapes alteration in bovine cells -
Li, C., Li, R.W., Gao, Y., Shin, J., Baldwin, R.L. 2012. Genome-wide ChIP-seq mapping and analysis of butyrate-induced H3K9 and H3K27 acetylation and epigenomic landscapes alteration in bovine cells [abstract]. Annual International Plant & Animal Genome Conference. W. 020.
Alpha-Tocopherol alters transcription activities that modulate tumor necrosis factor alpha (TNF-¿)-induced inflammatory response in bovine cells -
Li, C., Li, R.W., Elsasser, T.H., Kahl, S. 2011. Alpha-Tocopherol alters transcription activities that modulate tumor necrosis factor alpha (TNF-a)-induced inflammatory response in bovine cells. Gene Regulation and Systems Biology. 6:1-14.
Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle -
Hou, Y., Liu, G., Bickhart, D.M., Matukumalli, L.K., Li, C., Song, J., Gasbarre, L.C., Van Tassell, C.P., Sonstegard, T.S. 2011. Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle [abstract]. Paper No. 6.
Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus Cattle Reprint Icon -
Hou, Y., Liu, G., Bickhart, D.M., Matukumalli, L.K., Li, C., Song, J., Gasbarre, L.C., Van Tassell, C.P., Sonstegard, T.S. 2011. Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus Cattle. Functional and Integrative Genomics. 12(1):81-92.
Characterization of the rumen microbiota in pre-ruminant calves using metagenomic tools -
Li, R.W., Connor, E.E., Li, C., Baldwin, R.L., Sparks, M. 2011. Characterization of the rumen microbiota in pre-ruminant calves using metagenomic tools. Environmental Microbiology. 14(1):129-139.
Protein Tyrosine Nitration in Chronic Intramuscular Parasitism: Immunohistochemical evaluation of Relationships Between Nitration, Fiber Types, and Ubiquitin -
Elsasser, T.H., Romo, G.A., Eastridge, J.S., Kahl, S., Martinez, A., Li, C., Sartin, J.L., Cuttitta, F., Fayer, R., Solomon, M.B. 2011. Protein Tyrosine Nitration in Chronic Intramuscular Parasitism: Immunohistochemical evaluation of Relationships Between Nitration, Fiber Types, and Ubiquitin. Journal of Physiology. 1:10-18.
The vitamin D receptor and inducible nitric oxide synthase associated pathways in the development of acquired resistance to Cooperia oncophora infection in cattle -
Li, R.W., Li, C., Gasbarre, L.C. 2011. The vitamin D receptor and inducible nitric oxide synthase associated pathways in the development of acquired resistance to Cooperia oncophora infection in cattle. Veterinary Research. 42(1):48.
Effects of Environment on Animal Health: Mechanisms and Regulatory Inputs -
Elsasser, T.H., Li, C., Shaffer, J.F., Collier, R.J. 2012. Effects of Environment on Animal Health: Mechanisms and Regulatory Inputs. In: Collier, R.J. and Collier, J.L., editors. Environmental Physiology of Livestock. Oxford, U.K. Wiley-Blackwell Publications. p. 129-164.
Modeling the effects of estradiol and progesterone on the acute phase proinflammatory axis: Variability in tumor necrosis factor-alpha, nitric oxide, and xanthine oxidase responses to endotoxin challenge in steers -
Elsasser, T.H., Kahl, S., Li, C. 2011. Modeling the effects of estradiol and progesterone on the acute phase proinflammatory axis: Variability in tumor necrosis factor-¿, nitric oxide, and xanthine oxidase responses to endotoxin challenge in steers. Domestic Animal Endocrinology. 40(4):213-221.
NUTRIENTS AND EPIGENETICS IN BOVINE CELLS -
Li, C., Li, R.W., Elsasser, T.H. 2012. Nutrients and Epigenetics in Bovine Cells. In: Hasan Khatib, Editors. Nutrients and Epigenetics in Bovine Cells. In: Hasan Khatib, Editor. Livestock Epigenetics. New York, NY. Nova Science Publishers. p. 161-177.
MicroRNA (miRNA) expression is regulated by butyrate-induced epigenetic modulation of gene expression in bovine cells -
Li, C., Li, R.W., Elsasser, T.H. 2011. MicroRNA (miRNA) expression is regulated by butyrate-induced epigenetic modulation of gene expression in bovine cells. Plant and Animal Genome Conference Proceedings. W021.
Alpha-Tocopherol modulates transcriptional activities that affect essential biological processes in Bovine Cells -
Li, C., Li, R.W., Elsasser, T.H. 2010. Alpha-Tocopherol modulates transcriptional activities that affect essential biological processes in Bovine Cells. Gene Regulation and Systems Biology. 4:109-124.
Localized complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle -
Li, R.W., Hou, Y., Li, C., Gasbarre, L.C. 2010. Localized complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle. Veterinary Parasitology. 174(3-4):247-256.
MicroRNA (miRNA) expression is regulated by butyrate induced epigenetic modulation of gene expression in bovine cells -
Li, C., Li, R.W., Elsasser, T.H. 2010. MicroRNA (miRNA) expression is regulated by butyrate induced epigenetic modulation of gene expression in bovine cells. Genetics and Epigenetics. 3:23-32.
Specific cell cycle synchronization with butyrate and cell cycle analysis -
Li, C. 2011. Specific cell cycle synchronization with butyrate and cell cycle analysis. In: Banfalvi, G., editor. Methods in Molecular Biology, Cell Cycle Synchronization: Methods and Protocols. New York NY: Humana Press. p. 125-136.
Effects of short-term tocopherol (T) feeding on nitric oxide production and protein nitration following endotoxin (LPS) challenge in beef calves -
Kahl, S., Elsasser, T.H., Li, C., Lebold, K., Traber, M., Block, S. 2010. Effects of short-term tocopherol (T) feeding on nitric oxide production and protein nitration following endotoxin (LPS) challenge in beef calves. Journal of Animal Science. 88(E-Suppl. 2):590.
Metagenomics detects functional shifts in the bovine rumen microbiota in response to propionate intake -
Sparks, M., Huang, Y., Baldwin, R.L., Connor, E.E., Li, C., Sonstegard, T.S., Schroeder, S.G., Li, R.W. 2011. Metagenomics detects functional shifts in the bovine rumen microbiota in response to propionate intake. In: Li, R.W. editor. Metagenomics and its Applications in Agriculture. New York, NY: Nova Science Publishers. p. 165-183.
Comparison of the segmental duplication pattern on two cattle genome assemblies using FISH -
Liu, G., Cellamare, A., Ventura, M., Li, C., Eichler, E.E. 2010. Comparison of the segmental duplication pattern on two cattle genome assemblies using FISH. Plant and Animal Genome Conference. W178.
Nutrient-induced modulation of gene expression and cellular functions: modeling epigenetic regulation in bovine cells -
Epigenetic regulation of gene expression and cellular functions induced by butyrate, an example of interactions between gene and nutrients -
Li, C., Li, R.W., Elsasser, T.H., Connor, E.E. 2009. Epigenetic regulation of gene expression and cellular functions induced by butyrate, an example of interactions between gene and nutrients. American Dairy Science Association Discover Conference.
Global Genetic Profiles of Gene Network Disruption in Bovine Peripheral Blood Mononuclear Cells Induced Bovine Leukemia Virus (BLV) Infection Reprint Icon -
Li, C., Li, R.W., Elsasser, T.H., Kahl, S. 2009. Global genetic profiles of gene network disruption in bovine peripheral blood mononuclear cells induced bovine leukemia virus (BLV) infection. Genetics and Epigenetics.2:17-27.
Gene expression in the digestive tissues of ruminants and their relationships with feeding and digestive processes -
Connor, E.E., Li, R.W., Baldwin, R.L., Li, C. 2009. Gene expression in the digestive tissues of ruminants and their relationships with feeding and digestive processes. Animal. 4(7):993-1007.
Epigenetic mechanisms of nutrient-induced modulation of gene expression and cellular functions -
Li, C., Li, R.W., Elsasser, T.H. 2009. Epigenetic mechanisms of nutrient-induced modulation of gene expression and cellular functions. Gordon Research Conference Proceedings. Epigenetics. August 9-14, Holderness, NH.
Mucin biosynthesis in the bovine goblet cell induced by Cooperia oncophora infection Reprint Icon -
Li, R.W., Li, C., Elsasser, T.H., Liu, G., Garrett, W.M., Gasbarre, L.C. 2009. Mucin biosynthesis in the bovine goblet cell induced by Cooperia oncophora infection. Veterinary Parasitology. PMID 19647371.
Gene expression in the digestive tissues of ruminants and their relationships with feeding and digestive processes -
Connor, E.E., Li, R.W., Baldwin, R.L., Li, C. 2009. Gene expression in the digestive tissues of ruminants and their relationships with feeding and digestive processes.ISRP XIth International Symposium on Ruminant Physiology, Clermont-Ferrand, France, September 6-9.
Growth Hormone Effects in Immune Stress: AKT/eNOS Signaling Module in the Cellular Response -
Li, C., Elsasser, T.H., Kahl, S. 2009. AKT/eNOS Signaling Module Functions as a potential feedback loop in the growth hormone signaling pathway. Journal of Molecular Signaling. 4:1.
EPIGENETIC REGULATION IN BOVINE CELLS: NUTRIENT-INDUCED MODULATION OF GENE EXPRESSION AND CELLULAR FUNCTIONS -
Li, C., Elsasser, T.H., Li, R.W. 2009. Epigenetic regulation in bovine cells: Nutrient-induced modulation of gene expression and cellular functions. In: Rech, Leopold J., editor. Animal Genetics. Nova Science Pubilshers, Inc. (ISBN:978-60741-844-3).
Lipopolysaccharide-induced early response genes in bovine peripheral blood mononuclear cells implicate GLG1/E-selectin as a key ligand–receptor interaction Reprint Icon -
Li, C., Li, R.W., Elsasser, T.H., Kahl, S. 2009. Lipopolysaccharide-induced early response genes in bovine peripheral blood mononuclear cells implicate GLG1/E-selectin as a key ligand–receptor interaction. Functional and Integrative Genomics. 9(3):335-349.
Critical control points in the impact of proinflammatory immune response on growth and metabolism -
Elsasser, T.H., Caperna, T.J., Li, C.J., Kahl, S., Sartin, J.L. 2008. Critical control points in the impact of the proinflammatory immune response on growth and metabolism. Journal of Animal Science. 86(E. Suppl):E105-E 125.
IGF-I mediated inhibition of leptin receptor expression in porcine hepatocytes -
Ramsay, T.G., Richards, M.P., Li, C.J., Caperna, T.J. 2010. IGF-I mediated inhibition of leptin receptor expression in porcine hepatocytes. Comparative Biochemsitry and Physiology. 155(1):43-48.
Variability in tumor necrosis factor-alpha, nitric oxide, and xanthine oxidase responses to endotoxin challenge in heifers: Effect of estrous cycle stage Reprint Icon -
Kahl, S., Elsasser, T.H., Li, C. 2009. Variability in tumor necrosis factor-alpha, nitric oxide, and xanthine oxidase responses to endotoxin challenge in heifers: Effect of estrous cycle stage. Domestic Animal Endocrinology. 36:82-88.
Epigenetic regulation in bovine cells: nutrient-induced modulation of gene expression and cellular functions -
Li, C., Li, R.W., Elsasser, T.H. 2008. Epigenetic regulation in bovine cells: nutrient-induced modulation of gene expression and cellular functions. International Plant and Animal Genome IX Conference.
Transcriptome Characterization of Bovine Peripheral Blood Mononuclear Cells Stimulated by LPS -
Li, C., Li, R.W. 2008. Transcriptome Characterization of Bovine Peripheral Blood Mononuclear Cells Stimulated by LPS. [abstract]. . NIH Gene Expression Omnibus (GEO) Database.
Butyrate Induced Cell Cycle Arrest in Bovine Cells through Targeting Gene Expression relevance to DNA Replication Apparatus -
Li, C., Li, R.W. 2008. Butyrate Induced Cell Cycle Arrest in Bovine Cells through Targeting Gene Expression relevance to DNA Replication Apparatus. Gene Regulation and Systems Biology. 2:113-123.
Effects of butyrate on the expression of insulin-like growth factor binding proteins in bovine kidney epithelial cells -
Li, R.W., Li, C. 2008. Effects of butyrate on the expression of insulin-like growth factor binding proteins in bovine kidney epithelial cells. The Open Veterinary Science Journal. 2:1-6.
EPIGENETIC REGULATION OF GENOMES: NUTRIENT-SPECIFIC MODULATION OF GENETIC NETWORKS IN BOVINE CELLS -
Li, C., Elsasser, T.H., Li, R.W. 2008. Epigenetic regulation of genomes: nutrient-specific modulation of genetic networks in bovine cells. Animal Genetics International Conference Proceedings. 132:391-398.
Epigenetic regulation of genomes: Nutrient-specific modulation of genetic networks in bovine cells -
Li, C.-L, Elsasser, T.H., Li, R.W. 2008. Epigenetic regulation of genomes: nutrient-specific modulation of genetic networks in bovine cells [abstract]. International Symposium on Anima Genomics for Animal Health, Paris, France, October 23-25, 2007. Developments in Biologicals. 132:391-398.
Epigenetic mechanisms at work: Exploiting nutrient-specific modulation of genetic networks -
Li, C.-J, Elsasser, T.H., Li, R.W. 2007. Epigenetic mechanisms at work: Exploiting nutrient-specific modulation of genetic networks [abstract]. 29th General Assembly of the International Union of Biological Sciences and Scientific Symposium. Proceedings p7, Washington, DC.
Nitration of JAK-2 at the 1007Y-1008Y activation epitope impedes phosphorylation at this site: defining a GH, AKT/protein kinase B and nitric oxide synthase axis -
Elsasser, T.H., Li, C., Caperna, T.J., Kahl, S., Schmidt, W.F. 2007. GH-associated nitration of JAK2 at the 1007Y-1008Y epitope impedes phosphorylation at this site: Mechanism for and impact of a GH, AKT and nitric oxide synthase (NOS) axis on GH signal transduction. Endocrinology. 148:3792-3802. Available: http://endo.endojournals.org.
CAVEOLAE-BASED NITRATION AT THE JAK-2 KINASE 1007 Y-1008-Y PHOSPHORYLATION SITE; A NOVEL REGULATORY INPUT TO SIGNAL TRANSDUCTION PROCESSING -
Elsasser, T.H., Kahl, S., Li, C., Sartin, J.L., Garrett, W.M., Rodrigo, J. 2007. Caveolae-based nitration at the jak-2 kinase 1007 y-1008-y phosphorylation site; a novel regulatory input to signal transduction processing. Endocrinology 148:3803-3813. Available http://endo.endojournals.org.
Pathways analysis identifies perturbation of genetic networks induced by butyrate in a bovine kidney epithelial cell line -
Li, C.J., Li, R.W., Wang, Y.H. Elsasser, T.H. 2007. Pathway analysis identifies perturbation of genetic networks induced by butyrate in a bovine kidney epithelial cell line. Functional and Integrative Genomics. 7:193-205.
SPECIFIC CELL CYCLE SYNCHRONIZATION WITH BUTYRATE AND CELL CYCLE ANALYSIS BY FLOW CYTOMETRY FOR MADIN DARBY BOVINE KIDNEY (MDBK) CELL LINE -
Li, C., Elsasser, T.H. 2006. Specific cell cycle synchronization with butyrate and cell cycle analysis by flow cytometry for Madin Darby Bovine Kidney (MDBK) cell line. Journal of Animal and Veterinary Advances. 5(11):916-923.
GROWTH HORMONE (GH) DIRECTS NITRATION OF THE TYROSINE PHOSPHORYLATION SITE OF THE JAK-2 (1007-1008Y) IN HEPATOCYTES THROUGH AN AKT/PHOSPHORYLASE KINASE B ACTIVATION OF ENDOTHELIAL NITRIC OXIDE SYNTHASE (ENOS) -
Elsasser, T.H., Caperna, R.J., Li, C., Kahl, S. 2006. Growth hormone (GH) directs nitration of the tyrosine phosphorylation site of JAK-2 (1007-1008Y) in hepatocytes through an AKT/Phosphorylase Kinase B activation of endothelial nitric oxide synthase (eNOS) [abstract]. Proceedings of the Annual Meeting of the Endocrine Society. p. 44.
THE IGF SYSTEM IN CHICKENS: FACTORS AFFECTING GENE EXPRESSION IN MUSCLE AND LIVER -
Kuo, A., Clover, C.M., Rosebrough, R.W., McMurtry, J.P., Mitchell, A.D., Caperna, T.J., Li, C., Kahl, S., Elsasser, T.H. 2006. The IGF system in chickens: Factors affecting gene expression in muscle and liver [abstract]. Journal of Federation of American Societies for Experimental Biology. 20:A172.
SODIUM BUTYRATE INDUCED GENE EXPRESSION CHANGES IN THE MADIN-DARBY BOVINE KIDNEY EPITHELIAL CELLS -
Li, R.W., Li, C. 2006. Sodium butyrate induced gene expression changes in the madin-darby bovine kidney epithelial cells [abstract]. Gene expression Omnibus. GSE 3970.
TEMPORAL RESPONSE OF SIGNAL TRANSDUCTION ELEMENTS DURING ENDOTOXIN CHALLENGE IN CATTLE LIVER: EFFECTS OF GROWTH HORMONE TREATMENT -
Li, C.J., Kahl, S., Carbaugh, D., Elsasser, T.H. 2006. Temporal response of signal transduction elements during endotoxin challenge in cattle liver cells: Effects of growth hormone treatment. Domestic Animal Endocrinology 32(2):79-92.
GROWTH HORMONE EFFECTS IN IMMUNE STRESS: AKT/ENOS SIGNALING MODULE IN THE CELLULAR RESPONSE -
Li, C., Elsasser, T.H. 2006. Growth hormone effects in immune stress: AKT/ENOS signaling module in the cellular response [abstract]. Keystone Symposia, Signaling Networks. Abstract Book p.43.
TUMOR NECROSIS FACTOR-A (TNF-A) MODULATE INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN (IGFBPS) ACTIVITY FROM CULTURED EPITHELIAL VIA IGFBP-3 PROTEASE ACTIVITY -
Elsasser, T.H., Sartin, J.L., Li, C., Kahl, S. 2005. Tumor necrosis factor-a decreases media content of epithelial cell-derived insulin-like growth factor binding proteins (IGFBP) in part through increased proteolytic degradation of IGFBP-3 [abstract]. Journal of Animal Science. 83(Suppl.1):209.
HYPER-RESPONSIVENESS TO PROINFLAMMATORY CHALLENGE INTENSIFIES METABOLIC IMPAIRMENT: ASSOCIATIONS BETWEEN INCREASED 1007Y-1008Y JAK-2 NITRATION AND DECREASED IGF-1 AND IGF-1 MRNA EXPRESSION -
Elsasser, T.H., Garrett, W., Kahl, S., Schmidt, W., Li, C. 2005. Hyper-responsiveness to proinflammatory challenge intensifies metabolic impairment: associations between increased 1007-Y-1008Y JAK-2 nitration and decreased IGF-1 and IGF-1 mRNA expression [abstract]. Proceedings of the Endocrine Society, 87th Annual Meeting. p.391.
TEMPORAL RESPONSE OF SIGNAL TRANSDUCTION ELEMENTS DURING ENDOTOXIN CHALLENGE IN CATTLE LIVER CELLS: EFFECTS OF GROWTH HORMONE TREATMENT -
Li, C., Elsasser, T.H., Kahl, S., Carbaugh, D. 2005. Temporal response of signal transduction elements during endotoxin (LPS) challenge in cattle liver cells: Effects of growth hormone treatment [abstract]. Journal of Animal Science. 83(suppl 1):8.
UBIQUITIN-PROTEASOME PATHWAY IS INVOLVED IN BUTYRATE-INDUCED APOPTOSIS AND CELL CYCLE ARREST IN BOVINE KIDNEY EPITHELIAL CELLS -
Li, C.J., Elsasser, T.H. 2005. Ubiquitin-proteasome pathway is involved in butyrate-induced apoptosis and cell cycle arrest in bovine kidney epithelial cells [abstract]. Keystone Symposia, Ubiquitin and Signaling. Abstract Book. p55.
BUTYRATE-INDUCED APOPTOSIS AND CELL CYCLE ARREST IN BOVINE KIDNEY EPITHELIAL CELLS: INVOLVEMENT OF CASPASE AND PROTEASOME PATHWAYS -
Li, C.J., Elsasser, T.H. 2005. Butyrate-induced apoptosis and cell cycle arrest in bovine kidney epithelial cells: involvement of caspase and proteasome pathways. Journal of Animal Science. 83:89-97.
PROTEIN TYROSINE NITRATION: A MEMBRANE-ORGANIZED MECHANISM FOR ALTERED SIGNAL TRANSDUCTION DURING PROINFLAMMATORY STRESS -
Elsasser, T.H., Kahl, S., Sartin, J.L., Li, C. 2004. Protein tyrosine nitration: a membrane organized mechanism for altered signal transduction during proinflammatory stress [abstract]. Journal of Animal Science 82 (Suppl.1):445.
GROWTH HORMONE ADMINISTRATION PROMOTES A TEMPORALLY-DEFINED LOW-LEVEL NITRATION OF THE Y1007-Y1008 ACTIVATION SITE OF JAK-2 KINASE INVIVO AND IN VITRO -
Elsasser, T.H., Kahl, S., Li, C., Wilkins, B. 2004. Growth hormone administration promotes a temporally-defined low-level nitration of the Y1007-Y1008 activation site of JAK-2 kinase in vivo and invitro [abstract]. Endocrine Society Program and Abstracts. p. 245.
BUTYRATE-INDUCED APOPTOSIS AND CELL CYCLE ARREST IN BOVINE KIDNEY EPITHELIAL CELLS: INVOLVEMENT OF CASPASE AND PROTEASOME PATHWAYS -
Li, C., Elsasser, T. 2004. Butyrate-induced apoptosis and cell cycle arrest in bovine kidney epithelial cells: involvement of caspase and proteasome pathways [abstract]. BARC Poster Day.
RESPONSE OF INDUCIBLE-TYPE NITRIC OXIDE SYNTHASE AND CYTOKINES IN BOVINE PERIPHERAL BLOOD MONONUCLEAR CELLS UPON ACTIVATION BY BACTERIAL ENDOTOXINS -
Li, C., Carbaugh, D., Kahl, S., Elsasser, T.H. 2004. Concomitant dual wavelength fluorescence evaluation of inducible nitric oxide synthase and cytokine responses to endotoxin stimulation of peripheral blood mononuclear cells [abstract]. Journal of Animal Science 82(Suppl.1):180.
ROLE FOR CDK1 (CDC2)/CYCLIN A IN PREVENTING THE MAMMALIAN ORIGIN RECOGNITION COMPLEX'S LARGEST SUBUNIT (ORC1) FROM BINDING TO CHROMATIN DURING MITOSIS -
Li, C., Vassilev, A., DePamphilis, M.L. 2004. Role for Cdk1 (Cdc2)/Cyclin A in preventing the mammalian origin recognition complex's largest subunit (Orc1) from binding to chromatin during mitosis. Molecular and Cellular Biology. 24(13) p.5875-5886.
MECHANISMS UNDERLYING GROWTH HORMONE EFFECTS IN AUGMENTING NITRIC OXIDE PRODUCTION AND PROTEIN TYROSINE NITRATION DURING ENDOTOXIN CHALLENGE -
Elsasser, T.H., Kahl, S., MacLeod, C., Nicholson, B., Sartin, J.L., Li, C. 2004. Mechanisms underlying growth hormone effects in augmenting nitric oxide production and protein tyrosine nitration during endotoxin challenge. Endocrinology. 145(7):3413-3423.
CHROMOSOME REPLICATION: EUKARYOTIC DNA REPLICATION ORIGINS AND THE ORIGIN RECOGNITION COMPLEX -
DePamphilis, M.L., Li, C. 2004. DNA replication: eukaryotic origins and the origin recognition complex. Encyclopedia of Biological Chemistry (W.J. Lennarz & M.D. Lane, eds), Elsevier, Oxford. vol. 1:753-760.
REGULATION OF "ORC CYCLE" BY UBIQUITINATION AND CDC2/CDK1 AT DIFFERENT EVENTS OF THE CELL CYCLE -
INDUCTION OF APOPTOSIS BY BUTYRATE CORRELATES WITH INCREASING LEVEL OF PROTEIN UBIQUITINATION IN BOVINE KIDNEY EPITHELIAL CELLS (MDBK) -
Li, C., Elsasser, T.H. 2003. Induction of apoptosis by butyrate correlates with increasing level of protein ubiquitination in bovine kidney epithelial cells (MDBK) [abstract]. Journal of Animal Science. v. 81(1):249.
Last Modified: 5/2/2016
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