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United States Department of Agriculture

Agricultural Research Service

Related Topics

Charles Crane
Crop Production and Pest Control Research
Genetics

Phone: (765) 494-3611
Fax: (765) 496-3452

CROP PROD. & PEST CONTROL RES.
915 WEST STATE STREET
WEST LAFAYETTE , IN 479072054

Projects
MOLECULAR MECHANISMS OF RESISTANCE TO WHEAT FUNGAL PATHOGENS
In-House Appropriated (D)
  Accession Number: 423011
MOLECULAR MECHANISMS OF PLANT PATHOGEN INTERACTIONS IN CEREAL CROPS
In-House Appropriated (D)
  Accession Number: 423051

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Use of microsatellite and SNP markers to characterize biotypes in Hessian fly -
Schemerhorn, B.J., Crane, Y.M., Cambron, S.E., Crane, C.F., Shukle, R.H. 2015. Use of microsatellite and SNP markers to characterize biotypes in Hessian fly. Journal of Insect Science. 15(1):158. doi: 10.1093/jisesa/iev138.
The evolution of Hessian Fly from the Old World to the New World: evidence from molecular markers -
A Perl script for targeted local genome assembly -
Crane, C.F., Nemacheck, J.A., Subramanyam, S., Williams, C.E. 2012. A Perl script for targeted local genome assembly. Plant and Animal Genome Conference Proceedings. PO981.
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis -
Goodwin, S.B., M'Barek, S., Dhillon, B., Wittenberg, A.J., Crane, C.F., Van Der Lee, T.J., Grimwood, J., Aerts, A., Antoniw, J., Bailey, A., Bluhm, B., Bowler, J., Bristow, J., Canto-Canche, B., Churchill, A., Conde-Ferraez, L., Cools, H., Coutinho, P.M., Csukai, M., Dehal, P., De Wit, P., Donzelli, B., Foster, A.J., Hammond-Kosack, K., Hane, J., Henrissat, B., Killian, A., Koopmann, E., Kourmpetis, Y., Kuzniar, A., Lindquist, E., Lombard, V., Maliepaard, C., Martins, N., Mahrabi, R., Oliver, R., Ponomarenko, A., Rudd, J., Salamov, A., Schmutz, J., Schouten, H.J., Shapiro, H., Stergiopoulos, I., Torriani, S.F., Tu, H., De Vries, R.P., Wiebenga, A., Zwiers, L., Grigoriev, I.V., Kema, G.J. 2011. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis. PLoS Genetics. Available at: http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.1002070.
The Draft Genome Sequence of Mycosphaerella fijiensis, the Black Sigatoka Pathogen of Banana -
Kema, G., Goodwin, S.B., Van Der Lee, T., Dhillon, B., Arango, R., Crane, C.F., Diaz, C., Souza, M., Carlier, J., Schmutz, J., Grigoriew, I. 2010. The Draft Genome Sequence of Mycosphaerella fijiensis, the Black Sigatoka Pathogen of Banana. Meeting Proceedings.
Development of Simple Sequence Repeat Markers from Expressed Sequence Tags of the Maize Gray Leaf Spot Pathogen, Cercospora Zea-Maydis -
Dunkle, L.D., Crane, C.F., Goodwin, S.B. 2009. Development of Simple Sequence Repeat Markers from Expressed Sequence Tags of the Maize Gray Leaf Spot Pathogen, Cercospora Zea-Maydis. Molecular Ecology Resources. 9:1375-1379.
Outstanding: the Dispensable Chromosomes of Mycosphaerella Graminicola -
M'Barek, S.B., Van Der Lee, T.A., Wittenberg, A.H., Maliepaard, C., Crane, C.F., Dhillon, B., Goodwin, S.B., Schouten, H.J., Kema, G.H. 2009. Outstanding: the Dispensable Chromosomes of Mycosphaerella Graminicola. Fungal Genetics Conference Proceedings. 56:102
Analyses of Expressed Sequence Tags from the Maize Foliar Pathogen Cercospora Zeae-Maydis Identifing Novel Genes expressed during Vegetative, Infectious, & Reproductive Growth Reprint Icon -
Bluhm, B., Dhillon, B., Lindquist, E., Crane, C.F., Kema, G., Goodwin, S.B., Dunkle, L.D. 2008. Analyses of Expressed Sequence Tags from the Maize Foliar Pathogen Cercospora Zeae-maydis Identify Novel Genes Expressed during Vegetative, Infectious, & Reproductive Growth. Biomed Central (BMC) Genomics. 9:523.
Patterned sequence in the transcriptome of vascular plants -
Crane, C.F. 2007. Patterned sequence in the transcriptome of vascular plants. Biomed Central (BMC) Genomics [abstract]. Paper No. 173.
Characterization of Tandem Repeats and Repetitive Elements in the Genomes of Mycosphaerella graminicola and M. figiensis -
Crane, C.F., Quevillon, E., Goodwin, S.B. 2007. Characterization of Tandem Repeats and Repetitive Elements in the Genomes of Mycosphaerella graminicola and M. figiensis. Plant and Animal Genome VX Conference Abstracts. Available: http://www.intl-pag.org/15/abstracts/PAG15_P03b_144.html.
IDENTIFICATION AND GENETIC MAPPING OF HIGHLY POLYMORPHIC MICROSATELLITE LOCI FROM AN EST DATABASE OF THE SEPTORIA TRITICI BLOTCH PATHOGEN MYCOSPHAERELLA GRAMINICOLA -
Goodwin, S.B., Van Der Lee, T., Cavaletto, J.R., Hekkert, B., Crane, C.F., Kema, G.H. 2006. Identification and genetic mapping of highly polymorphic microsatellite loci from an EST database of the Septoria tritici blotch pathogen Mycosphaerella graminicola. Fungal Genetics and Biology. 44:398-414.
Population Structure of Hessian fly, Mayetiola destructor (Say), in the Southeastern United States -
Morton, P.K., Crane, C.F., Schemerhorn, B.J. 2006. Population Structure of Hessian fly, Mayetiola destructor (Say), in the Southeastern United States. International Plant Resistance to Insects Workshop Abstracts & Proceedings. p. 34.
A NEAREST-NEIGHBORING-END ALGORITHM FOR GENETIC MAPPING -
Crane, C.F., Crane, Y.M. 2005. A nearest-neighboring-end algorithm for genetic mapping. Bioinformatics. 21:1579-1591.
REAL-TIME PCR ANALYSIS OF GENES EXPRESSED DURING WHEAT-MYCOSPHAERELLA GRAMINICOLA INTERACTIONS -
Adhikari, T., Balaji, B., Breeden, J.D., Crane, C.F., Anderson, J.M., Goodwin, S.B. 2004. Real-time PCR analysis of genes expressed during wheat-mycosphaerella graminicola interactions. Phytopathology. 94:S2-S3.
A GENETIC MAP OF THE ITMI POPULATION USING THE NEAREST-NEIGHBORING-ENDS ALGORITHM -
FUNCTIONAL PATHOGENOMICS IN CEREALS -
Scofield, S.R., Brandt, A.S., Anderson, J.M., Crane, C.F., Goodwin, S.B., Ohm, H., Williams, C.E., Lohret, T., Crasta, O. 2004. Functional pathogenomics in cereals (abstract). Plant Animal and Microbe Genome XII. Abstract No. P839.
FUNCTIONAL PATHOGENOMICS IN CEREALS -
ANALYSIS OF THE WHEAT DEFENSE TRANSCRIPTOME -
Scofield, S.R., Anderson, J.M., Crane, C.F., Goodwin, S.B., Ohm, H., Williams, C.E., Loret, T., Crasta, O. 2003. Analysis of the wheat defense transcriptome. Proceedings of the Tenth International Wheat Genetics Symposium, Paestum, Italy. 1:407-410.
TRANSCRIPTION PROFILING OF WHEAT DEFENSE RESPONSES: HESSIAN FLY VERSUS MICROBIAL PATHOGENS -
Williams, C.E., Goodwin, S.B., Ohm, H.W., Anderson, J.M., Crane, C.F., Scofield, S.R., Lohret, T.A., Crasta, O.R. 2003. Transcription profiling of wheat defense responses: hessian fly versus microbial pathogens. In: Proceedings of the Entomological Society of America Regional Meetings. Entomological Society of American-North Central Branch, March 23-26, 2003, Madison, Wisconsin. Available: http://esa.ent.iastate.edu/confreg/?gridaction=viewonepresentation&year=2003 &presnum=083
Last Modified: 5/2/2016
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