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Bryan Bailey
Sustainable Perennial Crops Laboratory
Research Plant Pathologist

Phone: (301) 504-7985
Fax: (301) 504-1998
Room 322

10300 BALTIMORE AVENUE
BLDG 001 BARC-WEST
BELTSVILLE, MD 20705
Projects
Microbial Pathogenomics of the Major Cacao Diseases
Cooperative Agreement (A)
  Accession Number: 432970
Developing Pathogen- and Plant-Based Genetic Tools for Breeding Disease Resistance in Theobroma cacao
In-House Appropriated (D)
  Accession Number: 432718
Evaluation of Cacao Germplasm for Targeted Agronomic Traits in the International Cocao Genebank, Trinidad
Non-Assistance Cooperative Agreement (S)
  Accession Number: 433660
Developing Pathogen and Plant Based Genetic Tools for Breeding Disease Resistance in Theobroma Cacao
Non-Assistance Cooperative Agreement (S)
  Accession Number: 434576
Molecular Characterization and Diversity Analysis of Colombian Cacao Genebank Collections and Cacao Pathogens from Various Regions of Colombia
Non-Assistance Cooperative Agreement (S)
  Accession Number: 434577
Utilization of Next Generation Sequences to Address Genetic Diversity and Disease Interactions of Perennial Tropical Crops
Non-Assistance Cooperative Agreement (S)
  Accession Number: 436159
Metabolomic Analysis of Various Theobroma Cacao Diseases
Non-Assistance Cooperative Agreement (S)
  Accession Number: 437995
Quarantine, Germplasm Acquisition/Maintenance, Phytopathology Studies and Clone Evaluation of Theobroma Cacao
Trust Fund Cooperative Agreement (T)
  Accession Number: 438157
Development of a comprehensive genomic database of pathogens of Theobroma cacao.
Trust Fund Cooperative Agreement (T)
  Accession Number: 433003

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Independent whole-genome duplications define the architecture of the genomes of the devastating West African cacao black pod pathogen Phytophthora megakarya and its close relative Phytophthora palmivora Reprint Icon - (Peer Reviewed Journal)
Morales-Cruz, A., Ali, S.S., Minio, A., Figueroa-Balderas, R., Garcia, J.F., Kasuga, T., Puig, A.S., Marelli, J., Bailey, B.A., Cantu, D. 2020. Independent whole-genome duplications define the architecture of the genomes of the devastating West African cacao black pod pathogen Phytophthora megakarya and its close relative Phytophthora palmivora. G3, Genes/Genomes/Genetics. 10(6). https://doi.org/10.1534/g3.120.401014.
Independent whole-genome duplications define the architecture of the genomes of the devastating West African cacao black pod pathogen Phytophthora megakarya and its close relative Phytophthora palmivora Reprint Icon - (Peer Reviewed Journal)
Morales-Cruz, A., Ali, S., Minio, A., Balderas, R., Garcia, J.F., Kasuga, T., Puig, A.S., Philippe-Marelli, J., Bailey, B.A., Cantu, D. 2020. Independent whole-genome duplications define the architecture of the genomes of the devastating West African cacao black pod pathogen Phytophthora megakarya and its close relative Phytophthora palmivora. G3, Genes/Genomes/Genetics. https://doi.org/10.1534/g3.120.401014.
Identification and characterization of fungi causing thread blight diseases on cacao in Ghana - (Peer Reviewed Journal)
Disease and production Index (DPI) for selection of Cacao (Theobroma cacao) genotypes highly productive and tolerant to frosty pod rot (Moniliophthora roreri) - (Peer Reviewed Journal)
Jaimez, R.E., Vera, D.I., Mora, A., Loor, R.G., Bailey, B.A. 2020. Disease and production Index (DPI) for selection of Cacao (Theobroma cacao) genotypes highly productive and tolerant to frosty pod rot (Moniliophthora roreri). Plant Pathology. 69(4), p.698-712.
Survival capacity of cacao top grafted with scions infected by vascular streak dieback pathogen: potential source of ceratobasidium theobromae long-distance spread - (Peer Reviewed Journal)
Adi, A., Rosmana, A., Amin, N., Bailey, B.A., Ali, S. 2019. Survival capacity of cacao top grafted with scions infected by vascular streak dieback pathogen: potential source of ceratobasidium theobromae long-distance spread. Archives of Phytopathology and Plant Protection. 52:13-14.
Genome and transcriptome analysis of the latent pathogen lasiodiplodia Theobromae, an emerging threat to cacao industry - (Peer Reviewed Journal)
Ali, S., Shao, J.Y., Adi, A., Balidion, J., Strem, M., Meinhardt, L.W., Bailey, B.A. 2019. Genome and transcriptome analysis of the latent pathogen lasiodiplodia Theobromae, an emerging threat to cacao industry. Genes, Genomes, and Genomics. 63:37–52.
Draft genome sequence of fastidious pathogen Ceratobasidium theobromae, which causes vascular-streak dieback (VSD) in Theobroma cacao - (Peer Reviewed Journal)
Ali, S., Asman, A., Shao, J.Y., Firmansyah, A., Susilo, A., Rosamana, A., Mcmahon, P., Junaid, M., Guest, D., Kheng, T., Meinhardt, L.W., Bailey, B.A. 2019. Draft genome sequence of fastidious pathogen Ceratobasidium theobromae, which causes vascular-streak dieback (VSD) in Theobroma cacao. Fungal Biology and Biotechnology. 6:14.
Genetic improvement of Chinese jujube for disease resistances: current status, knowledge gaps and research needs Reprint Icon - (Peer Reviewed Journal)
Song, L., Cao, B., Meinhardt, L.W., Bailey, B.A., Zhang, D. 2019. Genetic improvement of Chinese jujube for disease resistances: current status, knowledge gaps and research needs. Crop Breeding, Genetics and Genomics. 2019;1:e190015. https://doi.org/10.20900/cbgg20190015.
Chocolate under threat from old and new cacao diseases Reprint Icon ()
Philippe Marelli, J., Guest, D.I., Bailey, B.A., Evans, H., Brown, J.K., Juanid, M., Barreto, R.W., Lisboa, D.O., Puig, A.S. 2019. Chocolate under threat from old and new cacao diseases. Phytopathology. https://doi.org/10.1094/PHYTO-12-18-0477-RVW.
Morphological variants of Moniliophthora roreri on artificial media and the biotroph/necrotroph shift - (Peer Reviewed Journal)
Bailey, B.A., Ali, S., Strem, M.D., Meinhardt, L.W. 2018. Morphological variants of Moniliophthora roreri on artificial media and the biotroph/necrotroph shift. Fungal Biology. 122(7):701-716.
The differential influence of temperature on Phytophthora megakarya and Phytophthora palmivora pod lesion expansion, mycelia growth, gene expression, and metabolite profiles - (Peer Reviewed Journal)
Puig, A.S., Ali, S., Strem, M.D., Sicher Jr, R.C., Gutierrez, O.A., Bailey, B.A. 2018. The differential influence of temperature on Phytophthora megakarya and Phytophthora palmivora pod lesion expansion, mycelia growth, gene expression, and metabolite profiles. Physiological and Molecular Plant Pathology. 102:95-112.
Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod rot, underwent increases in genome sizes and gene numbers by different mechanisms - (Peer Reviewed Journal)
Ali, S., Shao, J.Y., Strem, M.D., Amoako-Attah, I., Melnick, R., Yaw Akrofi, A., Coulibaly, K., Ismael Kebe, K., Guiltinan, Begoude, B., Ten Hoopen, G., Shen, D., Lary, D.J., Kronmiller, B., Tyler, B., Meinhardt, L.W., Bailey, B.A. 2017. Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod rot, underwent increases in genome sizes and gene numbers by different mechanisms. Genome Biology and Evolution. 9:536-557.
Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod induce similar reactions when infecting pods of a susceptible cacao genotype - (Peer Reviewed Journal)
Ali, S., Shao, J.Y., Strem, M.D., Lary, D.J., Meinhardt, L.W., Bailey, B.A. 2017. Phytophthora megakarya and P. palmivora, closely related causal agents of cacao black pod induce similar reactions when infecting pods of a susceptible cacao genotype. Frontiers in Plant Science. 8:169.
Phytophthora megakarya, a causal agent of black pod rot in Africa ()
Bailey, B.A., Ali, S., Akrofi, A., Meinhardt, L.W. 2016. Phytophthora megakarya, a causal agent of black pod rot in Africa. In: Bailey, B.A., Meinhardt, L.W., editors. Cacao diseases: A history of old enemies and new encounters. Switzerland: Springer. p. 267-303.
Cacao diseases: A history of old enemies and new encounters ()
Bailey, B.A., Meinhardt, L.W. 2016. Cacao diseases: A history of old enemies and new encounters. Switzerland: Springer. 633 pages.
Moniliophthora roreri Genome and Transcriptome ()
Meinhardt, L.W., Bailey, B.A. 2016. Moniliophthora roreri Genome and Transcriptome. In: Bailey, B.A., Meinhardt, L.W., editors. Cacao diseases: A history of old enemies and new encounters, Switzerland: Springer. p. 97-135.
PCR-based identification of cacao black pod causal agents and identification of biological factors possibly contributing to Phytophthora megakarya's field dominance in West Africa - (Peer Reviewed Journal)
Ali, S., Amoako-Attah, I., Bailey, R., Strem, M.D., Schmidt, M.E., Yaw Akrofi, A., Kolawole, O.O., Surendra, S.J., Goss, E., Didier Begoude, B.A., Martijin Ten, H., Phillips, W., Tyler, B., Meinhardt, L.W., Bailey, B.A. 2016. PCR-based identification of cacao black pod causal agents and identification of biological factors possibly contributing to Phytophthora megakarya's field dominance in West Africa. Plant Pathology. doi: 10.1111/ppa.12496.
Combination of RNAseq and SNP nanofluidic array reveals the center of genetic diversity of cacao pathogen Moniliophthora roreri in the upper Magdalena Valley of Colombia and its clonality - (Peer Reviewed Journal)
Ali, S., Shao, J.Y., Strem, M.D., Phillips-Mora, W., Zhang, D., Meinhardt, L.W., Bailey, B.A. 2015. Combination of RNAseq and SNP nanofluidic array reveals the center of genetic diversity of cacao pathogen Moniliophthora roreri in the upper Magdalena Valley of Colombia and its clonality. Frontiers in Microbiology. doi: 10.3389/fmicb.2015.00850.
Enhanced resistance in Theobroma cacao against oomycete and fungal pathogens by secretion of phosphatidylinositol-3-phosphate-binding proteins - (Peer Reviewed Journal)
Helliwell, E.E., Vega, A.J., Shi, Z., Bailey, B.A., Xio, S., Maximova, S.N., Tyler, B.M., Guiltinan, M. 2015. Enhanced resistance in Theobroma cacao against oomycete and fungal pathogens by secretion of phosphatidylinositol-3-phosphate-binding proteins. Plant Biotechnology Journal. 14:875–886.
First report of frosty pod rot caused by Moniliophthora roreri on cacao in Bolivia - (Peer Reviewed Journal)
Phillips-Mora, W., Melnick, R.L., Bailey, B.A. 2015. First report of frosty pod rot caused by Moniliophthora roreri on cacao in Bolivia. New Disease Reports. 31:29.
Biological control of Black Pod Disease and Seedling Blight of cacao caused by Phytophthora Species using Trichoderma from Aceh Sumatra - (Peer Reviewed Journal)
Sriwati, R., Melnick, R.L., Muarif, R., Strem, M.D., Samuels, G.J., Bailey, B.A. 2015. Biological control of Black Pod Disease and Seedling Blight of cacao caused by Phytophthora Species using Trichoderma from Aceh Sumatra. Biological Control. 89:33-41.
The influence of formulation on Trichoderma biological activity and frosty pod rot disease management in Theobroma cacao - (Peer Reviewed Journal)
Crozier, J., Arroyo, C., Morales, H., Melnick, R.L., Strem, M.D., Collins, R.T., Bailey, B.A. 2015. The influence of formulation on Trichoderma biological activity and frosty pod rot disease management in Theobroma cacao. Plant Pathology. DOI:10.1111/ppa.12383.
Genetic identity, ancestry and parentage in farmer selections of cacao from Aceh, Indonesia revealed by single nucleotide polymorphism (SNP) markers - (Peer Reviewed Journal)
Lukman, Zhang, D., Susilo, A., Dinarti, D., Bailey, B.A., Mischke, B.S., Meinhardt, L.W. 2014. Genetic identity, ancestry and parentage in farmer selections of cacao from Aceh, Indonesia revealed by single nucleotide polymorphism (SNP) markers. Tropical Plant Biology. 7:133-143.
Water-deficiency effects on single leaf gas exchange and on C4 pathway enzymes of maize genotypes with differing abiotic stress tolerance - (Peer Reviewed Journal)
Sicher, Jr., R.C., Bunce, J.A., Barnaby, J.Y., Bailey, B.A. 2015. Water-deficiency effects on single leaf gas exchange and on C4 pathway enzymes of maize genotypes with differing abiotic stress tolerance. Photosynthetica. 53:3-10.
Differential gene expression by Moniliophthora roreri while overcoming cacao tolerance in the field - (Peer Reviewed Journal)
Bailey, B.A., Melnick, R.L., Strem, M.D., Crozier, J., Shao, J.Y., Sicher, Jr., R.C., Ali, S.S., Zhang, D., Philips-Mora, W., Meinhardt, L.W. 2014. Differential gene expression by Moniliophthora roreri while overcoming cacao tolerance in the field. Molecular Plant Pathology. DOI:10.1111/mpp.12134.
Successful pod infections by Moniliophthora roreri result in differential Theobroma cacao gene expression depending on the clone’s level of tolerance - (Peer Reviewed Journal)
Ali, S., Melnick, R., Strem, M.D., Crozier, J., Shao, J.Y., Sicher Jr, R.C., Zhang, D., Philips-Mora, W., Meinhardt, L.W., Bailey, B.A. 2014. Successful pod infections by Moniliophthora roreri result in differential Theobroma cacao gene expression depending on the clone’s level of tolerance. Molecular Plant Pathology. DOI:10.1111/mpp.12126.
Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases - (Peer Reviewed Journal)
Meinhardt, L.W., Thomazella, D.P., Teixeira, P.J., Costa, G.G., Carazzolle, M., Schuster, S., Carlson, J.E., Guiltinan, M.J., Mieczkowski, P., Crow, J., Farmer, A., Ramaraj, T., Crosier, J., Davis, R.E., Shao, J.Y., Pereira, G.A., Bailey, B.A. 2014. Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases. Biomed Central (BMC) Genomics. 15:164.
Molecular and metabolic changes of cherelle wilt of cacao and its effect on Moniliophthora roreri - (Peer Reviewed Journal)
Melnick, R.L., Strem, M.D., Crozier, J., Sicher, Jr., R.C., Bailey, B.A. 2013. Molecular and metabolic changes of cherelle wilt of cacao and its effect on Moniliophthora roreri. Physiological and Molecular Plant Pathology. 84:153-162.
Dynamic changes in pod and fungal physiology associated with the shift from biotrophy to necrotrophy during the infection of Theobroma cacao by Moniliophthora roreri - (Peer Reviewed Journal)
Bailey, B.A., Crozier, J., Strem, M.D., Melnick, R.L., Zhang, D., Maximova, S., Guiltinan, M., Meinhardt, L.W. 2013. Dynamic changes in pod and fungal physiology associated with the shift from biotrophy to necrotrophy during the infection of Theobroma cacao by Moniliophthora roreri. Physiological and Molecular Plant Pathology. 81:84-96.
Trichoderma as an endophyte ()
Bailey, B.A., Melnick, R.L. 2013. Trichoderma as an endophyte. In: Mukherjee, P.K., Horwitz, B.A., Singh, U.S., Mukherjee, M., Schmoll, M., editors. Trichoderma: biology and applications, 1st Edition. London, England. CAB International. p. 152-172.
Detection and expression of enterotoxin genes in plant-associated strains of Bacillus cereus - (Peer Reviewed Journal)
Melnick, R.L., Poleatewich, A., Backman, P., Bailey, B.A. 2012. Detection and expression of enterotoxin genes in plant-associated strains of Bacillus cereus. Letters in Applied Microbiology. 54:468-474.
The Mitochondrial Genome of Moniliophthora roreri, the frosty pod rot pathogen of cacao - (Peer Reviewed Journal)
Costa, G.G., Cabrera, O., Tiburico, R.A., Medrano, F., Carazzolle, M., Thomazella, D., Schuster, S., Carlson, J.E., Guiltinan, M.J., Bailey, B.A., Mieckowski, P., Pereira, G.A., Meinhardt, L.W. 2012. The Mitochondrial Genome of Moniliophthora roreri, the frosty pod rot pathogen of cacao. Fungal Biology. 116(5):551-562.
Responses of growth and primary metabolism of water-stressed barley roots to rehydration - (Peer Reviewed Journal)
Sicher Jr, R.C., Timlin, D.J., Bailey, B.A. 2012. Responses of growth and primary metabolism of water-stressed barley roots to rehydration. Journal of Plant Physiology. 169:686-695. DOI:10.1016/J.JPLPH.2012.01.002.
Dissecting genetic structure in farmer selections of Theobroma cacao in the Peruvian Amazon: implications for on-farm conservation and rehabilitation - (Peer Reviewed Journal)
Zhang, D., Gardini, E.A., Baligar, V.C., Bailey, B.A., Meinhardt, L.W. 2011. Dissecting genetic structure in farmer selections of Theobroma cacao in the Peruvian Amazon: implications for on-farm conservation and rehabilitation. Tropical Plant Biology. 4:106-116.
The interaction of Theobroma cacao and Moniliophthora perniciosa, the causal agent of witches’ broom disease, during parthenocarpy - (Peer Reviewed Journal)
Melnick, R.L., Marelli, J., Sicher, Jr., R.C., Strem, M.D., Bailey, B.A. 2012. The interaction of Theobroma cacao and Moniliophthora perniciosa, the causal agent of witches’ broom disease, during parthenocarpy. Tree Genetics and Genomes. DOI: 10.1007/s11295-012-0513-8.
Isolation of endophytic endospore-forming bacteria from Theobroma cacao as potential biological control agents of cacao dieseases - (Peer Reviewed Journal)
Melnick, R.L., Bailey, B.A., Backman, P.A. 2011. Isolation of endophytic endospore-forming bacteria from Theobroma cacao as potential biological control agents of cacao dieseases. Biological Control. 57:236-245.
AFLP Phylogeny of 36 Erythroxylum species- genetic relationships among Erythroxylum species inferred by AFLP analysis - (Peer Reviewed Journal)
Emche, S.D., Zhang, D., Islam, M.B., Bailey, B.A., Meinhardt, L.W. 2011. AFLP Phylogeny of 36 Erythroxylum species- genetic relationships among Erythroxylum species inferred by AFLP analysis. Tropical Plant Biology. 4(2):126-133.
Endophytic Trichoderma isolates from tropical environments delay disease onset and induce resistance against Phytophthora capsici in hot pepper using multiple mechanisms - (Peer Reviewed Journal)
Bae, H., Roberts, D.P., Lim, H.S., Strem, M.D., Park, S., Ryu, C., Melnick, R., Bailey, B.A. 2011. Endophytic Trichoderma isolates from tropical environments delay disease onset and induce resistance against Phytophthora capsici in hot pepper using multiple mechanisms. Molecular Plant-Microbe Interactions. 24:336-351.
Genes acquired by horizontal transfer are potentially involved in the evolution of phytopathogenicity in Moniliophthora perniciosa and Moniliophthora roreri, two of the major pathogens of cacao - (Peer Reviewed Journal)
Tiburcio, R.A., Costa, G.G., Carazzolle, M.F., Schuster, S.C., Carlson, J.E., Guiltinan, M.J., Bailey, B.A., Argueso, J.L., Mieckowski, P., Meinhardt, L.W., Pereira, G.A. 2009. Genes acquired by horizontal transfer are potentially involved in the evolution of phytopathogenicity in Moniliophthora perniciosa and Moniliophthora roreri, two of the major pathogens of cacao. Journal of Molecular Evolution. 70:85-97.
Two dominant quasispecies stably co-exist in Alternanthera mosaic virus isolate SP and three viral genes modulate symptom expression - (Peer Reviewed Journal)
Lim, H.S., Vaira, A.M., Reinsel, M.D., Bae, H., Bailey, B.A., Domier, L.L., Hammond, J. 2010. Localization of Althernanthera mosaic virus patholgenicity determinants to RdRp and TGB1, and separation of TGB1 silencing suppression from movement functions. Journal of General Virology. 91:277-287.
Trichoderma species form endophytic associations within Theobroma cacao trichomes - (Peer Reviewed Journal)
Bailey, B.A., Strem, M.D., Wood, D.F. 2009. Trichoderma species form endophytic associations within Theobroma cacao trichomes. Mycological Research. 113:1365-1376.
In situ expression of trehalose synthesizing genes, TPS1 and TPPB, in Arabidopsis thaliana using the GUS reporter gene - (Peer Reviewed Journal)
Bae, H., Sicher Jr, R.C., Natarajan, S.S., Bailey, B.A. 2009. In situ expression of trehalose synthesizing genes, TPS1 and TPPB, in Arabidopsis thaliana using the GUS reporter gene. Plant Cell Tissue And Organ Culture. 98:311-319.
The beneficial endophyte, Trichoderma hamatum, isolate DIS 219B promotes growth and delays the onset of the drought response in Theobroma cacao - (Peer Reviewed Journal)
Bae, H., Kim, S., Sicher, Jr., R.C., Kim, M.S., Strem, M.D., Bailey, B.A., Melnick, R. 2009. The beneficial endophyte, Trichoderma hamatum, isolate DIS 219B promotes growth and delays the onset of the drought response in Theobroma cacao. Journal of Experimental Botany. 60:3279-3295.
Molecular characterization of an earliest cacao (Theobroma cacao L.) collection from Peruvian Amazon using microsatllite DNA markers - (Peer Reviewed Journal)
Zhang, D., Boccara, M., Motilal, L., Mischke, B.S., Johnson, E.S., Butler, D., Bailey, B.A., Meinhardt, L.W. 2009. Molecular characterization of an earliest cacao (Theobroma cacao L.) collection from Peruvian Amazon using microsatllite DNA markers. Tree Genetics and Genomes. http://dx.doi.org/10.1007/s11295-009-0212-2.
Effects of solar UV radiation on alkaloid production in Erythroxylum novogranatense var. novogranatense - (Peer Reviewed Journal)
Lydon, J., Casale, J.F., Kong, H.N., Sullivan, J.H., Daughtry, C.S., Bailey, B.A. 2009. The effects of ambient solar UV radiation on alkaloid production by Erythroxylum novogranatense var. novogranatense. Photochemistry and Photobiology. 85(5):1156:1161.
A genome survey of Moniliophthora perniciosa gives new insights into Witches’ Broom Disease of cacao - (Peer Reviewed Journal)
Mondego, J.M., Carazolle, M.F., Costa, G., Formighieri, L.P., Parizzi, L.P., Rincones, J., Cotomacci, C., Vidal, R.O., Estrela, R.C., Garcia, O., Castro, L.A., Gramacho, K.P., Goncalves, M.S., Neto-Goes, A., Barbosa, L.V., Guiltinan, M.J., Bailey, B.A., Meinhardt, L.W., Cascardo, J.C., Pereira, G.A. 2008. A genome survey of Moniliophthora perniciosa gives new insights into Witches’ Broom Disease of cacao. Biomed Central (BMC) Genomics. 9:548.
COMPARATIVE GENOME ANALYSES OF MONILIOPHTHORA PERNICIOSA AND MONILIOPHTHORA RORERI: TWO CLOSELY RELATED PHYTOPATHOGENIC BASIDIOMYCETES THAT CAUSE DISTINCTLY DIFFERENT DISEASES OF THEOBROMA CACAO - (Abstract Only)
Meinhardt, L.W., Bailey, B.A., Guiltinan, M., Carazzolle, M.F., Lacerda, G., Mondego, J., Formigheri, E., Periera, G.A. 2008. Comparative genome analyses of moniliophthora perniciosa and moniliophthora roreri: two closely related phytopathogenic basidiomycetes that cause distinctly different diseases of theobroma cacao. Mid Atlantic Plant Molecular Biology Society Conference. .
Moniliophthora perniciosa, the causal agent of witches’ broom disease of cacao: What’s new from this old foe? ()
Meinhardt, L.W., Rincones, J., Bailey, B.A., Aime, M.C., Griffith, C., Zhang, D., Pereira, G. 2008. Moniliophthora perniciosa, the causal agent of witches’ broom disease of cacao: What’s new from this old foe. Molecular Plant Pathology. 9(5):577-588.
Colonization of cacao seedlings by Trichoderma stromaticum, a mycoparasite of the witches’ broom pathogen, and its influence on plant growth and resistance - (Peer Reviewed Journal)
Desouza, J.T., Pomella, A.W., Bailey, B.A., Bae, H., Erbe, E.F., Murphy, C.A. 2008. Colonization of cacao seedlings by Trichoderma stromaticum, a mycoparasite of the witches’ broom pathogen, and its influence on plant growth and resistance. Biological Control 46:36-45.
Bacterial endophytes: Bacillus spp. from vegetable crops as potential biological control agents of black pod rot of cacao - (Peer Reviewed Journal)
Melnick, R.L., Zidack, N.K., Bailey, B.A., Maximova, S.N., Guitinan, M., Backman, P.A. 2008. Bacterial endophytes: Bacillus spp. from vegetable crops as potential biological control agents of black pod rot of cacao. Biological Control. 46:46-56.
Antibiosis, mycoparasitism, and colonization sucess for endophytic Trichoderma isolates with biological control potential in Theobroma cacao - (Peer Reviewed Journal)
Bailey, B.A., Bae, H., Strem, M.D., Crozier, J., Thomas, S.E., Samuels, G.J., Holmes, K.A. 2008. Antibiosis, mycoparasitism, and colonization sucess for endophytic Trichoderma isolates with biological control potential in Theobroma cacao. Biological Control. 46:24-35.
TOWARDS INTEGRATED CONTROL OF FROSTY POD ROT (MONILIOPHTHORA RORERI) OF CACAO: A MODEL PROGRAMME FOR PEST AND DISEASE CONTROL - (Abstract Only)
Holmes, K.A., Johnson, E.S., Kruass, U., Bateman, R., Bailey, B.A., Samuels, G.J., Suarez, C., Thomas, S.E., Evans, H.C., Adonijah, V., Rosenquist, E. Towards integrated control of frosty pod rot (moniliophthora roreri) of cacao: a model programme for pest and disease control. Proceedings of the International Cocoa Producer's Conference. Oct 15-17. Abstr. P.43.
Genetic comparison of two related fungal pathogens of Theobroma cacao - (Proceedings)
Meinhardt, L.W., Bailey, B.A., Guiltinan, M., Pereira, G.A. 2007. Genetic comparison of two related fungal pathogens of Theobroma cacao. International Conference on Microbial Genomes.
Proteomic and genetic analysis of glycinin subunits of sixteen soybean genotypes - (Peer Reviewed Journal)
Natarajan, S.S., Xu, C., Bae, H., Bailey, B.A., Cregan, P.B., Caperna, T.J., Garrett, W.M., Luthria, D.L. 2007. Proteomic and genetic analysis of glycinin subunits of sixteen soybean genotypes. Plant Physiology and Biochemistry. 45(6):436-444.
MONILIOPHTHORA PERNICIOSA PRODUCES HORMONES AND ALTERS ENDOGENOUS AUXIN AND SALICYLIC ACID IN INFECTED COCOA LEAVES - (Peer Reviewed Journal)
Aruna Kilaru, A., Bailey, B.A., Hasenstein, K.H. 2007. Moniliophthora perniciosa produces hormones and alters endogenous auxin and salicylic acid in infected cocoa leaves. Federation of European Microbiological Societies Microbiology Letters. 274:238-244.
IDENTIFICATION AND REGULATION OF GENES FROM A BIOCONTROL STRAIN OF FUSARIUM OXYSPORUM - (Peer Reviewed Journal)
Fravel, D.R., Moravec, B.C., Bailey, B.A. 2007. Identification and regulation of genes from a biocontrol strain of fusarium oxysporum. Phytopathology. 155:526-530.
Coordinated regulation of polyamine biosynthesis in Theobroma cacao (cacao) tissues responding to stress - (Peer Reviewed Journal)
Bae, H., Kim, S., Kim, M.S., Sicher, Jr., R.C., Strem, M.D., Natarajan, S.S., Bailey, B.A. 2008. Coordinated regulation of polyamine biosynthesis in Theobroma cacao (cacao) tissues responding to stress. Plant Physiology and Biochemistry. 46:174-188.
PROTEOMIC AND GENOMIC CHARACTERIZATION OF KUNITZ TRYPSIN INHIBITORS IN WILD AND CULTIVATED SOYBEAN GENOTYPES - (Peer Reviewed Journal)
Natarajan, S.S., Xu, C., Bae, H., Bailey, B.A. 2006. Proteomic and genomic characterization of kunitz trypsin inhibitors in wild and cultivated soybean genotypes. Journal of Plant Physiology. 164(6):756-763.
NECROSIS- AND ETHYLENE-INDUCING PEPTIDE (NEP1) FROM FUSARIUM OXYSPORUM INDUCES A COMPLEX CASCADE OF TRANSCRIPTS ASSOCIATED WITH SIGNAL TRANSDUCTION AND PROGRAMMED CELL DEATH. - (Peer Reviewed Journal)
Bae, H., Kim, M.S., Sicher Jr, R.C., Bae, H., Bailey, B.A. 2006. Necrosis- and ethylene-inducing peptide (nep1) from fusarium oxysporum induces a complex cascade of transcripts associated with signal transduction and programmed cell death. Plant Physiology. 141:1056-1067.
FUNGAL AND PLANT GENE EXPRESSION DURING THE COLONIZATION OF THEOBROMA CACAO SEEDLINGS BY ISOLATES OF FOUR TRICHODERMA SPECIES - (Peer Reviewed Journal)
Bailey, B.A., Bae, H., Strem, M.D., Roberts, D.P., Thomas, S.E., Samuels, G.J., Choi, I., Holmes, K.A. 2006. Fungal and plant gene expression during the colonization of theobroma cacao seedlings by isolates of four trichoderma species. Planta. 224(6):1449-1464.
NEP1 ORTHOLOGS ENCODING THE NECROSIS AND ETHYLENE INDUCING PROTEINS EXIST AS A MULTIGENE FAMILY IN PHYTOPHTHORA MEGAKARYA, CAUSAL AGENT OF BLACK POD DISEASE ON CACAO - (Peer Reviewed Journal)
Bae, H., Bowers, J.H., Tooley, P.W., Bailey, B.A. 2005. Nep1 orthologs encoding the necrosis and ethylene inducing proteins exist as a multigene family in phytophthora megakarya, causal agent of black pod disease on cacao. Mycological Research. 109:1373-1385.
ROLE OF COVER CROPS IN IMPROVING SOIL AND ROW CROPS PRODUCTIVITY ()
Fageria, N.K., Baligar, V.C., Bailey, B.A. 2005. Role of cover crops in improving soil and row crops productivity. Communications in Soil Science and Plant Analysis. 36:2733-2757.
MOLECULAR RESPONSES RESULTING FROM THE ENDOPHYTIC ASSOCIATION BETWEEN TRICHODERMA SPECIES AND COCOA (THEOBROMA CACAO). - (Abstract Only)
Bailey, B.A., Bae, H., Strem, M.D., Samuels, G.J., Evans, H.C., Thomas, S.E., Holmes, K.A. 2005. Molecular responses resulting from the endophytic association between Trichoderma species and cocoa (Theobroma cacao). American Phytopathological Society Annual Meeting. Phytopathology 95:S5
Exogenous trehalose alters arabidopsis transcripts involved in cell wall modification, abiotic stress, nitrogren metabolism, and plant defense - (Peer Reviewed Journal)
Bae, H., Herman, E.M., Bailey, B.A., Bae, H., Sicher Jr, R.C. 2005. Exogenous trehalose alters arabidopsis transcripts involved in cell wall modification, abiotic stress, nitrogren metabolism, and plant defense. Physiologia Plantarum. 125:117-126.
NEP1 INDUCED GENE EXPRESSION IN THEOBROMA CACAO LEAVES AND THE RELATIONSHIP TO A COMPATIBLE INFECTION BY PHYTOPHTHORA MEGAKARYA, CAUSAL AGENT OF BLACK POD - (Peer Reviewed Journal)
Bailey, B.A., Bae, H., Strem, M.D., De Mayolo, G.A., Guiltinan, M.J., Verica, J.A., Maximova, S.N., Bowers, J.H. 2005. Nep1 induced gene expression in theobroma cacao leaves and the relationship to a compatible infection by phytophthora megakarya, causal agent of black pod. Plant Physiology and Biochemistry 43: 611-622.
GENE EXPRESSION IN LEAVES OF THEOBROMA CACAO IN RESPONSE TO MECHANICAL WOUNDING, ETHYLENE, OR METHYL JASMONATE - (Peer Reviewed Journal)
Bailey, B.A., Strem, M.D., Antunez De Mayolo, G., Guiltinan, M.J. 2005. Gene expression in leaves of theobroma cacao in response to mechanical wounding, ethylene, or methyl jasmonate. Plant Science 128: 1247-1258.
CARBON DIOXIDE AND PHOTOSYNTHETIC PHOTON FLUX DENSITY EFFECTS ON GROWTH AND MINERAL UPTAKE PARAMETERS OF CACAO - (Peer Reviewed Journal)
Baligar, V.C., Bunce, J.A., Bailey, B.A., Machado, R.C., Pomella, A.W. 2004. Carbon dioxide and photosynthetic photon flux density effects on growth and mineral uptake parameters of cacao. Journal of Food Agriculture and the Environment 3:142-147.
ISOLATION OF EARLY DEFENSE-RELATED ESTS FROM SUBTRACTED-NORMALIZED CDNA LIBRARIES OF ELICITED CACAO (THEOBROMA CACAO L.) LEAVES - (Peer Reviewed Journal)
Verica, J.A., Maximova, S., Strem, M.D., Carlson, J., Bailey, B.A., Guiltinan, M. 2004. Isolation of early defense-related ests from subtracted-normalized cdna libraries of elicited cacao (theobroma cacao l.) leaves. Plant Cell Reports 23:404-413.
MULTIPLE NEP1 ORTHOLOGUES FROM PHYTOPHTHORA MEGAKARYA WERE EXPRESSED DURING THE INFECTION OF THEOBROMA CACAO LEAVES AND NEP1 PROTEIN INDUCES VARIOUS WOUND-RESPONDING GENES IN CACAO LEAVES. - (Abstract Only)
Bae, H., Bailey, B.A., Strem, M.D., De Maylolo, G.A., Guilitnan, M.J., Verica, J.A., Maximova, S.N., Bowers, J.H. 2004. Multiple nep1 orthologues from phytophthora megakarya were expressed during the infection of theobroma cacao leaves and nep1 protein induces various wound-responding genes in cacao leaves. [abstract]. BARC Poster Day.
INFLUENCE OF ADJUVANTS ON DISEASE DEVELOPMENT BY PLEOSPORA PAPAVERACEA ON OPIUM POPPY (PAPAVER SOMNIFERM) AND RESULTING YIELD LOSSES - (Peer Reviewed Journal)
Bailey, B.A., Oneill, N.R., Anderson, J.D. 2004. Influence of adjuvants on disease development by pleospora papaveracea on opium poppy (papaver somniferm) and resulting yield losses. Weed Science. 52:424-432.
GENETIC DIVERSITY OF TEMPERATE AND TROPICAL ISOLATES OF PHYTOPHTHORA CAPSICI - (Abstract Only)
Bowers, J.H., Bailey, B.A., Martin, F.N. 2003. Genetic diversity of temperate and tropical isolates of phytophthora capsici [abstract]. American Phytopathological Society Annual Meeting.
FORMS AND LEVELS OF N ON GROWTH AND NUTRITION OF CACAO - (Abstract Only)
Baligar, V.C., Bunce, J.A., Johnson, E.L., Sicher Jr, R.C., Bailey, B.A. 2003. Forms and levels of n on growth and nutrition of cacao [abstract]. American Society of Agronomy Meetings.p. 28.
EFFECTS OF THE FUNGAL PROTEIN NEP1 AND PSEUDOMONAS SYRINGAE ON GROWTH OF CANADA THISTLE (CIRSIUM ARVENSE), COMMON RAGWEED (AMBROSIA ARTEMISIIFOLIA), AND COMMON DANDELION (TARAXACUM OFFICINALE) - (Peer Reviewed Journal)
Gronwald, J.W., Plaisance, K.L., Bailey, B.A. 2004. Effects of the fungal protein Nep1 and Pseudomonas syringae on growth of Canada thistle (Cirsium arvense), common ragweed (Ambrosia artemisiifolia), and common dandelion (Taraxacum officinale). Weed Science. 52(1):98-104.
PRODUCTION OF PLEOSPORA PAPAVERACEA BIOMASS IN LIQUID CULTURE AND ITS INFECTIVITY ON OPIUM POPPY (PAPAVER SOMNIFERUM) - (Peer Reviewed Journal)
Bailey, B.A., Lumsden, R.D., O'Neill, N.R., Lewis, J.A. 2004. Production of Pleospora papaveracea biomass in liquid culture and its infectivity on opium poppy (Papaver somniferum). Weed Science. 51:91-97.
DIFFERENCES IN GENE EXPRESSION OF PATHOGENIC AND BIOCONTROL FUSARIUM OXYSPORUM - (Abstract Only)
ALTERED GENE EXPRESSION IN THREE PLANT SPECIES IN RESPONSE TO TREATMENT WITH NEP1, A FUNGAL PROTEIN THAT CAUSES NECROSIS - (Peer Reviewed Journal)
Keates, S.E., Kostman, T.A., Anderson, J.D., Bailey, B.A. 2003. Altered gene expression in three plant species in response to treatment with nep1, a fungal protein that causes necrosis. Plant Physiology. 132:1610-1622.
EFFECT OF THE FUNGAL PROTEIN NEP1 AND PSEUDOMONAS SYRINGAE PV. TAGETIS ON GROWTH OF CANADA THISTLE (CIRSIUM ARVENSE), COMMON RAGWEED (AMBROSIA ARTEMISIIFOLIA), AND DANDELION (TARAXACUM OFFICINALE) - (Abstract Only)
DIFFERENCES IN GENE EXPRESSION BETWEEN PATHOGENIC AND BIOCONTROL FUSARIUM - (Abstract Only)
THE USDA PROGRAM IN MOLECULAR GENOMICS, DISEASE RESISTANCE AND IPM STRATEGIES FOR THEOBROMA CACAO - (Proceedings)
Saunders, J.A., Schnell Ii, R.J., Hebbar, P., Goenaga, R.J., Bowers, J.H., Sanogo, S., Bailey, B.A., Brown, S.A., Mischke, B.S. 2002. The usda program in molecular genomics, disease resistance and ipm strategies for theobroma cacao. PCMA International Meeting.
CELLULAR DAMAGE AND WOUND RESPONSIVE GENE INDUCTION IN WEEDS TREATED WITH NEP1, A NECROSIS INDUCING PEPTIDE - (Abstract Only)
Keates, S.E., Kostman, T.A., Anderson, J.D., Bailey, B.A. 2002. Cellular damage and wound responsive gene induction in weeds treated with nep1, a necrosis inducing peptide [abstract]. American Society of Plant Biologists Annual Meeting.
PRODUCTION AND GERMINATION OF CONIDIA BY TRICHODERMA STROMATICUM, A MYCOPARASITE OF CRINIPELLIS PERNICIOSA ON COCAO - (Peer Reviewed Journal)
Sanogo, S., Pomella, P.K., Hebbar, P.K., Bailey, B.A., Costa, J.C., Samuels, G.J., Lumsden, R.D. 2002. Production and germination of conidia by trichoderma stromaticum, a mycoparasite of crinipellis perniciosa on cocao. Phytopathology. 92:1032-1037.
EXPRESSION OF NEP1 BY FUSARIUM OXYSPORUM F. SP. ERYTHOXYLI AFTER GENE REPLACEMENT AND OVEREXPRESSION USING PEG-MEDIATED TRANSFORMATION - (Peer Reviewed Journal)
Bailey, B.A., Apel-Birkhold, P.C., Luster, D.G. 2002. Expression of nep1 by fusarium oxysporum f. sp. erythoxyli after gene replacement and overexpression using peg-mediated transformation. Molecular Plant Microbe International Symposium. 92:283-841.
THE USDA PROGRAM IN MOLECULAR GENOMICS, DISEASE RESISTANCE AND IPM STRATEGIES FRO THEOBROMA CACAO - (Abstract Only)
Saunders, J.A., Schnell Ii, R.J., Hebbar, P., Goenaga, R.J., Bowers, J.H., Bailey, B.A., Brown, S.A., Mischke, B.S. 2001. The usda program in molecular genomics, disease resistance and ipm strategies fro theobroma cacao [abstract]. PCMA International Meeting.
DIFFERENTIAL GENE EXPRESSION IN WEED SPECIES TREATED WITH A NECROSIS INDUCING PEPTIDE - (Abstract Only)
Keates, S.E., Bailey, B.A. 2001. Differential gene expression in weed species treated with a necrosis inducing peptide [abstract]. Molecular Plant Microbe International Symposium.
GENE EXPRESSION OF THEOBROMA CACAO L. IN RESPONSE TO STRESS - (Abstract Only)
DIFFERENTIAL GENE EXPRESSION IN WEED SPECIES TREATED WITH A NECROSIS-INDUCING PEPTIDE - (Abstract Only)
Keates, S.E., Bailey, B.A. 2001. Differential gene expression in weed species treated with a necrosis-inducing peptide [abstract]. Mid Atlantic Plant and Molecular Biology Proceedings.
THE IMPACT OF PLANT DISEASES ON WORLD CHOCOLATE PRODUCTION - (Peer Reviewed Journal)
OXYGEN METABOLISM IN PLANT/BACTERIA INTERACTIONS: CHARACTERIZATION OF THE OXYGEN UPTAKE RESPONSE OF BACTERIA - (Peer Reviewed Journal)
THE IMPACT OF PLANT DISEASES ON WORLD CHOCOLATE PRODUCTION ()
TRANSFORMATION OF FUSARIUM OXYSPORUM F. SP. ERYTHROXYLI TO ALTER PRODUCTIONOF THE PHYTOTOXIC PROTEIN NEP1 - (Abstract Only)
FACTORS INFLUENCING THE HERBICIDAL ACTIVITY OF NEP1, A FUNGAL PROTEIN THAT INDUCES THE HYPSENSITIVE RESPONSE IN SPOTTED KNAPWEED - (Peer Reviewed Journal)
ENHANCEMENT OF BIOCONTROL OF OPIUM POPPY BY PLEOSPORA PAPAVERACEA BY ADDITION OF NEP1, A PROTEIN PRODUCED BY FUSARIUM OXYSPORUM - (Peer Reviewed Journal)
AN IMPROVED FORMULATION FOR A MYCOHERBICIDE - (Peer Reviewed Journal)
BIOHERBICIDES: THEIR USE, PERCEIVED LIMITATIONS, AND FUTURE - (Abstract Only)
POTENTIAL USE OF THE FUNGAL PROTEIN, NEP1, FOR CONTROL OF BROAD-LEAF WEEDS - (Abstract Only)
POTENTIAL FOR DISPERSAL OF FUSARIUM OXYSPORUM F. SP. ERYTHROXYLI BY INFECTED SEED - (Peer Reviewed Journal)
FORMULATIONS OF FUSARIUM F. SP. ERYTHROXYLI FOR BIOCONTROL OF ERYTHROXYLUM COCA VAR. COCA - (Peer Reviewed Journal)
MOLECULAR CHARACTERIZATION OF NIP1, A GENE ENCODING THE 24KDA ELICITOR FROMFUSARIUM OXYSPORUM F.SP. ERYTHROXYLII - (Peer Reviewed Journal)
FORMULATION OF MYCOHERBICIDAL STRAINS OF FUSARIUM OXYSPORUM - (Peer Reviewed Journal)
A 24 KDA PROTEIN FROM FUSARIUM OXYSPORUM F. SP. ERYTHROXYLI THAT MAY INDUCERESISTANCE IN SEVERAL PLANT SPECIES - (Abstract Only)
INDUCED RESISTANCE MAY BE ENHANCED BY THE 24 KDA PROTEIN FROM FUSARIUM OXYSPORUM - (Abstract Only)
DISPERSAL OF FORMULATIONS OF THE MYCOHERBICIDAL STRAIN OF FUSARIUM OXYSPORUM F. SP. ERYTHROXYLI BY ANTS - (Peer Reviewed Journal)
INTITIAL EVALUATION OF DENDRYPHION PENICILLATUM AND PLEOSPORA PAPAVERACEA AS MYCOHERBICIDES FOR OPIUM POPPY (PAPAVER SOMNIFERUM) - (Abstract Only)
GENETIC CHARACTERIZATION BY RAPD ANALYSIS OF AN EMERGING EPIDEMIC IN PERU OF FUSARIUM OXYSPORUM F. SP. ERYTHROXYLI - (Peer Reviewed Journal)
STRATEGIES FOR BIOLOGICAL CONTROL OF NARCOTIC PLANTS - (Proceedings)
STRATEGIES OF BIOLOGICAL CONTROL OF NARCOTIC PLANTS - (Proceedings)
AN ALGINATE FORMULATION OF FUSARIUM OXYSPORUM SCHLECHTEND:FR. F. SP. ERYTHROXYLI FOR BIOCONTROL OF ERYTHROXYLUM COCA VAR. COCA - (Peer Reviewed Journal)
THE SENSITIVITY OF ERYTHROXYLUM COCA VAR. COCA LEAVES TO STRESS: THEIR RESPONSE TO ETHYLENE AND FUNGAL PROTEIN PREPARATIONS - (Peer Reviewed Journal)
EFFECT OF SCLEROTIAL DAMAGE OF SCLEROTINIA SCLEROTIORUM ON THE MYCOPARASITIC ACTIVITY OF TRICHODERMA HAMATUM - (Peer Reviewed Journal)
FERMENTATION AND FORMULATION OF DENDRYPHION PENICILLATUM, A POTENTIAL MYCOHERBICIDE OF PAPAVER SOMNIFERUM - (Abstract Only)
TRANSFORMATION-MEDIATED GENE DISRUPTION OF THE GENE, NIP1, ENCODING A 24 KDA NECROSIS INDUCING PROTEIN IN FUSARIUM OXYSPORUM F. SP. ERYTHROXYLI - (Abstract Only)
FORMULATIONS OF FUSARIUM OXYSPORUM FOR BIOCONTROL OF ERYTHROXYLUM COCA VAR COCA - (Abstract Only)
PATHOGENICITY AND STABILITY OF A TAGGED FUNGAL WEED PATHOGEN - (Abstract Only)
PHYSIOLOGICAL RESPONSES OF TOBACCO TO THE 24KD ELICITOR FROM FUSARIUM OXYSPORUM - (Abstract Only)
DISPERSAL OF FUSARIUM OXYSPORUM F. SP. ERYTHROXLI BY INFECTED COCA SEED - (Abstract Only)
DNA FINGERPRINTING OF WEED PATHOGENS FOR BIOLOGICAL CONTROL - (Abstract Only)
A SELECTION AND TAGGING SYSTEM FOR MONITORING THE RELEASE OF FUNGAL WEED BIOCONTROL AGENTS - (Abstract Only)
THE 24 KDA PROTEIN FROM FUSARIUM OXYSPORUM SCHLECHTEND:FR.; ITS PRODUCTION BY DIFFERENT FUNGAL ISOLATES AND BIOLOGICAL ACTIVITY AMONG DIFFERENT PLANT SPECIES - (Peer Reviewed Journal)
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