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United States Department of Agriculture

Agricultural Research Service

Related Topics

William Miller (Bill)
Produce Safety and Microbiology Research
Microbiology

Phone: (510) 559-5992
Fax: (510) 559-6162
Room WAB200-D

USDA, ARS, PWA, WRRC-PSM
800 BUCHANAN STREET
ALBANY , CA 94710

Projects
Molecular Identification and Characterization of Bacterial and Viral Pathogens Associated with Foods
Appropriated (D)
  Accession Number: 430420
Fitness and Virulence of Antimicrobial-resistant Campylobacter in the Poultry Production Ecosystem
Specific Cooperative Agreement (S)
  Accession Number: 427347
Genomics and Metagenomics of Antimicrobial-resistance in the Poultry Production Ecosystem
Specific Cooperative Agreement (S)
  Accession Number: 428810

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Complete genome sequences of multidrug-resistant Campylobacter jejuni 14980A (turkey feces) and Campylobacter coli 14983A (housefly from turkey farm), harboring a novel gentamicin resistance mobile element. -
Comparative genomics of Campylobacter iguaniorum to unravel genetic regions associated with reptilian hosts -
Whole genome sequence analysis indicates recent diversification of mammal-associated Campylobacter fetus and implicates a genetic factor associated with H2S production -
Van Der Graff, L., Duim, B., Miller, W.G., Forbes, K.J., Wagenaar, J.A., Zomer, A. 2016. Whole genome sequence analysis indicates recent diversification of mammal-associated Campylobacter fetus and implicates a genetic factor associated with H2S production. BMC Genomics (2016). 17: 713.
Novel plasmid conferring kanamycin and tetracycline resistance in turkey-derived Campylobacter jejuni strain 11601MD -
Crespo, M., Altermann, E., Olson, J., Miller, W.G., Kathariou, S. 2016. Novel plasmid conferring kanamycin and tetracycline resistance in turkey-derived Campylobacter jejuni strain 11601MD. Plasmid Journal. doi: 10.1016/j.plasmid.2016.06.001.
Comparative genomics of Campylobacter fetus from reptiles and mammals reveals divergent evolution in host-associated lineages -
Gilbert, M.J., Miller, W.G., Yee, E., Zomer, A., Van Der Graaf, L., Fitzgerald, C., Forbes, K.J., Meric, G., Sheppard, S.K., Wagenaar, J.A., Duim, B. 2016. Comparative genomics of Campylobacter fetus from reptiles and mammals reveals divergent evolution in host-associated lineages. Genome Biology and Evolution. 8(6):2006-2019.
Routes of transmission of salmonella and campylobacter in breeder turkeys -
Complete genome sequence of the Campylobacter iguaniorum strain RM11343, isolated from an alpaca -
Complete genome sequences of Campylobacter hyointestinalis subsp. hyointestinalis strain LMG9260 and Campylobacter hyointestinalis subsp. lawsonii strain LMG15993 -
Miller, W.G., Yee, E., Chapman, M.H. 2016. Complete genome sequences of Campylobacter hyointestinalis subsp. hyointestinalis strain LMG9260 and Campylobacter hyointestinalis subsp. lawsonii strain LMG15993. Genome Announcements. Genome Announc 4(4):e00665-16..
Complete genome sequence of the Campylobacter iguaniorum strain RM11343, isolated from an alpaca. -
Miller, W.G., Yee, E., Huynh, S., Chapman, M.H., Parker, C. 2016. Complete genome sequence of the Campylobacter iguaniorum strain RM11343, isolated from an alpaca.. Genome Announcements. Genome Announc 4(3):e00646-16.
Discriminative power of Campylobacter phenotypic and genotypic typing methods. -
Duarte, A., Seliwiorstow, T., Miller, W.G., De Zutter, L., Uyttendaele, M., Dierick, K., Botteldoorn, N. 2016. Discriminative power of Campylobacter phenotypic and genotypic typing methods. Journal of Microbiological Methods. 125:33-39.
Campylobacter fetus subspecies contain conserved type IV secretion systems on multiple genomic islands and plasmids -
Van Der Graaf, L., Miller, W.G., Yee, E., Gorkiewicz, G., Forbes, K., Zomer, A.L., Wagenaar, J., Duim, B. 2016. Campylobacter fetus subspecies contain conserved type IV secretion systems on multiple genomic islands and plasmids. PLoS One. 11(4):e0152832..
The polymorphic aggregative phenotype of Shiga toxin-producing Escherichia coli O111 depends on rpoS and curli -
Diodati, M.E., Bates, A.H., Miller, W.G., Carter, M.Q., Zhou, Y., Brandl, M. 2016. The polymorphic aggregative phenotype of Shiga toxin-producing Escherichia coli O111 depends on rpoS and curli. Applied and Environmental Microbiology. 82:1475–1485. doi: 10.1128/AEM.03935-15.
Complete genomic sequences of two outbreak strains of Salmonella enterica subsp. enterica serovar Thompson associated with cilantro -
Parker, C., Huynh, S., Gorski, L.A., Cooper, K.K., Miller, W.G. 2015. Complete genomic sequences of two outbreak strains of Salmonella enterica subsp. enterica serovar Thompson associated with cilantro. Genome Announcements. 3(6):e01335-15.
Complete genomic sequences of Campylobacter jejuni strains RM3196 (233.94) and RM3197 (308.95) that were isolated from patients with Guillain-Barré Syndrome -
Parker, C., Huynh, S., Heikema, A.P., Cooper, K.K., Miller, W.G. 2015. Complete genomic sequences of Campylobacter jejuni strains RM3196 (233.94) and RM3197 (308.95) that were isolated from patients with Guillain-Barré Syndrome. Genome Announcements. 3(6):e01312-15.
Complete genome sequence of the Campylobacter ureolyticus clinical isolate RIGS 9880 -
Miller, W.G., Yee, E., On, S., Bono, J.L., Andersen, L.P. 2015. Complete genome sequence of the Campylobacter ureolyticus clinical isolate RIGS 9880. Genome Announcements. 3(6):e01291-15.
Complete genome sequence of Campylobacter gracilis ATCC 33236T -
Miller, W.G., Yee, E. 2015. Complete genome sequence of Campylobacter gracilis ATCC 33236T. Genome Announcements. 3(6):e01087-15.
Campylobacter iguaniorum sp. nov., isolated from reptiles -
Gilbert, M.J., Kik, M., Miller, W.G., Duim, B., Wagenaar, J.A. 2015. Campylobacter iguaniorum sp. nov., isolated from reptiles. International Journal of Systematic and Evolutionary Microbiology. 65(3):975-982.
Comparative genomics of the Campylobacter lari group -
Miller, W.G., Yee, E., Chapman, M.H., Smith, T.P., Bono, J.L., Huynh, S., Parker, C., Vandamme, P., Luong, K., Korlach, J. 2014. Comparative genomics of the Campylobacter lari group. Genome Biology and Evolution. doi: 10.1093/gbe/evu249.
Inconsistency of phenotypic and genomic characteristics of Campylobacter fetus subspecies requires re-evaluation of current diagnostics -
Van Der Graaf, L., Miller, W.G., Yee, E., Rijnsburger, M., Wagenaar, J.A., Duim, B. 2014. Inconsistency of phenotypic and genomic characteristics of Campylobacter fetus subspecies requires re-evaluation of current diagnostics. Journal of Clinical Microbiology. 52(12):4183-4188.
Complete genome sequence of Campylobacter iguaniorum strain 1485ET, isolated from a bearded dragon (Pogona vitticeps) -
Gilbert, M.J., Miller, W.G., Yee, E., Kik, M., Wagenaar, J.A., Duim, B. 2014. Complete genome sequence of Campylobacter iguaniorum strain 1485ET, isolated from a bearded dragon (Pogona vitticeps). Genome Announcements. 2(4):e00844-14. doi: 10.1128/genomeA.00844-14.
The complete genome sequence and annotation of a Campylobacter jejuni strain, MTVDSCj20, isolated from a naturally colonized farm-raised chicken -
Taveirne, M.E., Dunham, D.T., Miller, W.G., Parker, C., Huynh, S., Dirita, V.J. 2014. The complete genome sequence and annotation of a Campylobacter jejuni strain, MTVDSCj20, isolated from a naturally colonized farm-raised chicken. Genome Announcements. 2(4):e00852-14. doi: 10.1128/genomeA.00852-14.
Description of Campylobacter fetus subsp. testudinum subsp. nov., isolated from humans and reptiles -
Fitzgerald, C., Tu, Z., Patrick, M., Stiles, T., Lawson, A.J., Santovenia, M., Gilbert, M., Van Bergen, M., Joyce, K., Pruckler, J., Stroika, S., Duim, B., Miller, W.G., Loparev, V., Sinnige, J.C., Fields, P.I., Tauxe, R., Blaser, M.J., Wagenaar, J.A. 2014. Description of Campylobacter fetus subsp. testudinum subsp. nov., isolated from humans and reptiles. International Journal of Systematic and Evolutionary Microbiology. 64(9):2944-2948.
The microbiome structure and Campylobacter jejuni transcriptome in naturally-raised chickens -
Use of an improved atpA amplification and sequencing method to identify members of the Campylobacteraceae and Helicobacteraceae -
Miller, W.G., Yee, E., Jolley, K.A., Chapman, M.H. 2014. Use of an improved atpA amplification and sequencing method to identify members of the Campylobacteraceae and Helicobacteraceae. Letters in Applied Microbiology. 58(6):582-590. DOI: 10.1111/lam.12228.
Divergent distribution of the sensor kinase CosS in non-thermophilic Campylobacter species and its functional incompatibility with the Campylobacter jejuni CosR -
Hwang, S., Miller, W.G., Ryu, S., Jeon, B. 2014. Divergent distribution of the sensor kinase CosS in non-thermophilic Campylobacter species and its functional incompatibility with the Campylobacter jejuni CosR. PLoS One. 9(2):e89774.
The first closed genome sequence of Campylobacter fetus subsp. venerealis biovar intermedius -
Van Der Graff, L., Miller, W.G., Yee, E., Bono, J.L., Rijnsburger, M., Campero, C., Wagenaar, J.A., Duim, B. 2014. The first closed genome sequence of Campylobacter fetus subsp. venerealis biovar intermedius. Genome Announcements. 2(1):e01246-13.
Biological roles of the O-methyl phosphoramidate capsule modification in Campylobacter jejuni -
Van Alpen, L., Wenzel, C.Q., Richards, M., Fodor, C., Ashmus, R.A., Stahl, M., Karlyshev, A.V., Wren, B.W., Stintzi, A., Miller, W.G., Lowrey, T.L., Szymanski, C.M. 2014. Biological roles of the O-methyl phosphoramidate capsule modification in Campylobacter jejuni. PLoS One. 9(1):e87051.
Complete genome sequence of the clinical Campylobacter coli isolate 15-537360 -
Pearson, B.M., Rokney, A., Crossman, L.C., Miller, W.G., Wain, J., Van Vliet, A.H. 2013. Complete genome sequence of the clinical Campylobacter coli isolate 15-537360. Genome Announcements. 1(6):e01056-13.
Complete genome sequence of Campylobacter fetus subsp. testudinum type strain 03-427T -
Gilbert, M.J., Miller, W.G., Yee, E., Blaser, M.J., Wagenaar, J.A., Duim, B. 2013. Complete genome sequence of Campylobacter fetus subsp. testudinum type strain 03-427T. Genome Announcements. 1:e00900-13. DOI: 10.1128/genonmeA.00900-13.
Multi-omics approaches to deciphering a hypervirulent strain of Campylobacter jejuni -
Wu, Z., Sahin, O., Shen, Z., Liu, P., Miller, W.G., Zhang, Q. 2013. Multi-omics approaches to deciphering a hypervirulent strain of Campylobacter jejuni. Genome Biology. 5(11):2217-2230.
The complete genome sequence of the Arcobacter butzleri cattle isolate 7h1h -
Merga, J., Winstanley, C., Williams, N.J., Yee, E., Miller, W.G. 2013. The complete genome sequence of the Arcobacter butzleri cattle isolate 7h1h. Genome Announcements. 1(4):e00655-13.
The complete genome sequences of 65 Campylobacter jejuni and C. coli strains -
Evolution of campylobacter species in New Zealand -
French, N., Yu, S., Biggs, P., Binney, B., Fearnhead, P., Holland, B., Fox, A., Grove-White, D., Miller, W.G., Muellner, P., Carter, P. 2014. Evolution of campylobacter species in New Zealand. Campylobacter Ecology and Evolution. In: Meric, G. and Sheppard, S., editors. Norfolk, UK: Caister Academic Press. p.221-240.
Exploring the diversity of Arcobacter spp. in cattle in the UK using MLST and whole genome sequencing -
Merga, J.Y., Williams, N.J., Miller, W.G., Leatherbarrow, A.J., Bennett, M., Hall, N., Ashelford, K.E., Winstanley, C. 2013. Exploring the diversity of Arcobacter spp. in cattle in the UK using MLST and whole genome sequencing. PLoS One. 8(2):e55240. doi:10.1371/journal.pone.0055240.
Using MOMP typing as an epidemiological tool to investigate outbreaks caused by milkborne Campylobacter jejuni isolates in California Reprint Icon -
Jay-Russell, .T., Mandrell, R.E., Yuan, J., Bates, A.H., Manalac, R., Mohle-Boetani, J., Kimura, A., Lidgard, J., Miller, W.G. 2012. Using MOMP typing as an epidemiologic tool to investigate milkborne Campylobacter jejuni outbreaks in California. Journal of Clinical Microbiology. 51(1):195-201.
Progressive genome-wide introgression in agricultural Campylobacter coli Reprint Icon -
Sheppard, S.K., Didelot, X., Jolley, K.A., Darling, A.E., Kelly, D., Colles, F.M., Strachen, N.J., Ogden, I.D., Forbes, K.J., French, N., Carter, P., Miller, W.G. 2012. Progressive genome-wide introgression in agricultural Campylobacter coli. Proceedings of the National Academy of Sciences. 22:1051-1064.
Regulation of energy metabolism by the extracytoplasmic function (ECF) s factors of Arcobacter butzleri -
Martinez-Malaxetxeba, I., Mutts, R., Parker, C., Miller, W.G., Huynh, S., Gaastra, W., Van Putten, J.P., Fernandez-Astorga, A., Wosten, M.M. 2012. Regulation of energy metabolism by the extracytoplasmic function (ECF) s factors of Arcobacter butzleri. PLoS One. doi%2F10.1371%2Fjournal.pone.0044796.
Diversity in the protein N-glycosylation pathways among campylobacter species -
Nothaft, H., Scott, N.E., Vingradov, E., Liu, X., Hu, R., Li, J., Beadle, B., Fodor, C., Miller, W.G., Cordwell, S.J., Szymanski, C.M. 2012. Diversity in the protein N-glycosylation pathways among campylobacter species. Molecular and Cellular Proteomics. doi:10.1074/mcp.m112.021519.
Comprehensive detection and discrimination of campylobacter species using confocal micro-raman spectroscopy and multilocus sequence typing -
Lu, X., Huang, Q., Miller, W.G., Aston, D., Xu, J., Xue, F., Zhang, H., Rasco, B., Wang, S., Konkel, M.E. 2012. Comprehensive detection and discrimination of campylobacter species using confocal micro-raman spectroscopy and multilocus sequence typing. Journal of Clinical Microbiology. doi:10.1128/JCM.01144-12.
Multilocus sequence typing (MLST) methods for the emerging Campylobacter species C. hyointestinalis, C. lanienae, C. sputorum, C. concisus and C. curvus Reprint Icon -
Miller, W.G., Chapman, M.H., Yee, E., On, S.L., Mcnulty, D.K., Lastovica, A.J., Carroll, A.M., Mcnamara, E.B., Duffy, G., Mandrell, R.E. 2012. Multilocus sequence typing (MLST) methods for the emerging Campylobacter species C. hyointestinalis, C. lanienae, C. sputorum, C. concisus and C. curvus.. Frontiers in Cellular and Infection Microbiology. 10:3389/fcimb.2012.00045.
Isolation of Campylobacter from feral swine (Sus scrofa) on the ranch associated with the 2006 Escherichia coli O157:H7 spinach outbreak investigation in California Reprint Icon -
Jay-Russell, M.J., Bates, A.H., Harden, L.A., Miller, W.G., Mandrell, R.E. 2012. Isolation of Campylobacter from feral swine (Sus scrofa) on the ranch associated with the 2006 Escherichia coli O157:H7 spinach outbreak investigation in California. Zoonoses and Public Health. 10.1111/j.1863-2378.2012.01465.x.
Evolutionary silence of the acid chaperone protein HdeB in enterohemorrhagic Escherichia coli O157:H7 Reprint Icon -
Carter, M.Q., Louie, J.W., Fagerquist, C.K., Sultan, O., Miller, W.G., Mandrell, R.E. 2012. Evolutionary silence of the acid chaperone protein HdeB in enterohemorrhagic Escherichia coli O157:H7. Applied and Environmental Microbiology. 78:1004-1014.
Genomics and isolation of emerging CHRO species -
Characterization of the extrachromosomal function (ECF) sigma factors of Arcobacter butzleri -
O-METHYL PHOSPHORAMIDATE MODIFICATIONS ON THE CAPSULAR POLYSACCHARIDE OF CAMPYLOBACTER JEJUNI ARE INVOLVED IN SERUM RESISTANCE, INFECTION, AND INSECTICIDAL ACTIVITY -
Hybrid speciation in agricultural Campylobacter coli -
A comparison of Arcobacter isolation methods and the diversity of Arcobacter spp. in Cheshire, UK.__________________________________________ -
Sloane, J.Y., Leatherbarrow, A.J., Winstanley, C., Bennett, M., Hart, C.A., Miller, W.G., Williams, N. 2010. A comparison of Arcobacter isolation methods and the diversity of Arcobacter spp. in Cheshire, UK. Applied and Environmental Microbiology. 10.1128/AEM.01964-10.
Typing of Campylobacter jejuni and Campylobacter coli isolated from live broilers and retail broiler meat by flaA-RFLP, MSLT, PFGE, and REP-PCR. -
Behringer, M., Miller, W.G., Oyarzabal, O.A. 2010. flaA-PCR, MLST, PFGE and Rep-PCR Typing of Campylobacter jejuni and Campylobacter coli isolated from live broilers and retail broiler meat. Journal of Microbiological Methods. 84(2011) 194-201.
Differences in Methylation at GATC sites in genomic DNA of Campylobacter coli from turkeys and swine -
Wright, S., Wilson, S., Miller, W.G., Mandrell, R.E., Siletsky, R.M., Kathariou, S. 2010. Methylation at GATC sites in genomic DNA of Campylobacter coli from turkeys and swine. Applied and Environmental Microbiology. 76(21):7314-7317.
Rapid Identification of Protein Biomarkers of E. coli O157:H7 by MALDI-TOF-TOF Mass Spectrometry and Top-Down Proteomics -
Fagerquist, C.K., Garbus, B.R., Miller, W.G., Williams, K.E., Yee, E., Bates, A.H., Boyle, S., Harden, L.A., Cooley, M.B., Mandrell, R.E. 2010. Rapid Identification of Protein Biomarkers of E. coli O157:H7 by MALDI-TOF-TOF Mass Spectrometry and Top-Down Proteomics. Analytical Chemistry. 82:2717-2725.
Comparative Genomics of the Genus Campylobacter: Analysis of All 24 Described Campylobacter Species. -
Arcobacter: An Opportunistic Human Foodborne Pathogen? -
Wesley, I.V., Miller, W.G. 2010. Arcobacter: An Opportunistic Human Foodborne Pathogen? In: Scheld, W.M., Grayson, M.L., Hughes, J.M., editors. Emerging Infections 9. Washington, DC: American Society of Microbiology Press. p. 185-211.
The Complete Genome of the Human Clinical Isolate Campylobacter upsaliensis RM3195 -
First multilocus sequence typing scheme for Arcobacter spp. -
Miller, W.G., Wesley, I.V., On, S., Houf, K., Megraud, F., Wang, G., Yee, E., Srijan, A., Mason, C. 2009. First multilocus sequence typing scheme for Arcobacter spp.. BMC Microbiology. doi:10.1186/1471-2180-9-196
DNA identification and characterization of Campylobacter jejuni and Campylobacter coli isolated from cecal samples of chickens in Grenada -
Analysis of the Pan Genome of Campylobacter jejuni Isolates Recovered from Poultry by Pulse-Field Gel Electrophoreis, MLST and rep-PCR Reveals Different Discriminatory Capabilities -
Wilson, M.K., Lane, A.B., Law, B.F., Miller, W.G., Joens, L.A., Konkel, M.E., White, B.A. 2009. Analysis of the Pan Genome of Campylobacter jejuni Isolates Recovered from Poultry by Pulse-Field Gel Electrophoreis, MLST and rep-PCR Reveals Different Discriminatory Capabilities. Microbial Ecology. DOI 10, 1007/s00248-009-9571-3
Induction of Purple Sulfur Bacterial Growth in Dairy Wastewater Lagoons by Circulation -
Mcgarvey, J.A., Miller, W.G., Lathrop, J.R., Silva, C.J., Bullard, G. 2009. Induction of Purple Sulfur Bacterial Growth in Dairy Wastewater Lagoons by Circulation. Letters in Applied Microbiology. 49:427-433.
Rapid Identification of E. coli O157:H7 by "Top-Down" Proteomics Using MALDI-TOF/TOF Mass Spectrometry -
Fagerquist, C.K., Garbus, B.R., Williams, K.E., Bates, A.H., Boyle, S., Harden, L.A., Miller, W.G., Mandrell, R.E. 2009. Rapid Identification of E. coli O157:H7 by "Top-Down" Proteomics Using MALDI-TOF/TOF Mass Spectrometry.IN: Proceedings of the 57th American Society of Mass Spectrometry Conference, May 31-June 4, 2009, Philadelphia, PA. DVD:A091307.8125ver.1.pdf
Correlation between genotypic diversity, lipooligosaccharide gene locus class variation and Caco-2 invasion potential of Campylobacter jejuni from human and chicken meat origin: a contribution to virulotyping -
Habib, I., Louwen, R., Uytendaele, M., Houf, K., Vandenberg, O., Nieuwenhuis, E.E., Miller, W.G., Vanbelkum, A., Dezutter, L. 2009. Correlation between genotypic diversity, lipooligosaccharide gene locus class variation and Caco-2 invasion potential of Campylobacter jejuni from human and chicken meat origin: a contribution to virulotyping. Applied and Environmental Microbiology. 75(13):4277-4288.
Clonal population structure and antimicrobial resistance of Campylobacter jejuni from chicken meat in Belgium -
Habib, I., Miller, W.G., Uyttendaele, M., Houf, K., Dezutter, L. 2009. Clonal population structure and antimicrobial resistance of Campylobacter jejuni from chicken meat in Belgium. Applied and Environmental Microbiology. 75(13):4264-4272.
Examination of Campylobacter jejuni putative adhesins leads to the identification of a new protein, designated FlpA, required for chicken colonization -
Flanagan, R.M., Neal-Mckinney, J.M., Dhillon, A.S., Miller, W.G., Konkle, M.E. 2009. Examination of Campylobacter jejuni putative adhesins leads to the identification of a new protein, designated FlpA, required for chicken colonization. Infection and Immunity. 77:2399-2407
Rapid Identification of E. coli O157:H7 by "Top-Down" Proteomics Using MALDI-TOF/TOF Mass Spectrometry -
Autoinducer-2 production in Campylobacter jejuni contributes to chicken colonization Reprint Icon -
Quinones, B., Miller, W.G., Bates, A.H., Mandrell, R.E. 2009. Autoinducer-2 production in Campylobacter jejuni contributes to chicken colonization. Applied and Environmental Microbiology. 75/1:281-285
The complete genome sequence and analysis of the human pathogen Campylobacter lari. -
Miller, W.G., Wang, G., Binnewies, T.T., Parker, C. 2008. The complete genome sequence and analysis of the human pathogen Campylobacter lari. Foodborne Pathogens and Disease. 5(4):371-386.
Comparative genomic analysis of clinical strains of Campylobacter jejuni from South Africa -
Quinones, B., Guilhabert, M.R., Miller, W.G., Mandrell, R.E., Lastovica, A.J., Parker, C. 2008. Comparative genomic analysis of clinical strains of Campylobacter jejuni from South Africa. PLoS One. 3(4)e2015_1-e2015_10
High Resolution Genotyping of Campylobacter Using PCR and High-Throughput Mass Spectrometry -
Hannis, J., Manalili, S., Hall, T., Ranken, R., White, N., Sampath, R., Blyn, L., Ecker, D., Mandrell, R.E., Fagerquist, C.K., Bates, A.H., Miller, W.G., Hofstadler, S. 2008. High Resolution Genotyping of Campylobacter Using PCR and High-Throughput Mass Spectrometry. Journal of Clinical Microbiology.46(4) 1220-1225.
The complete genome sequence and analysis of the Epsilonproteobacterium Arcobacter butzleri. -
Miller, W.G., Parker, C., Rubenfield, M., Mendz, G.L., Wosten, M.M., Ussery, D.W., Stolz, J.F., Binnewies, T.T., Hallin, P.F., Wang, G., Malek, J.A., Rogosin, A., Stanker, L.H., Mandrell, R.E. 2007. The complete genome sequence and analysis of the Epsilonproteobacterium Arcobacter butzleri. PLoS One. 2(12):e1358.
AI-2 signaling in Campylobacter jejuni and its contribution to chicken colonization -
Oxygen requirement and tolerance of Campylobacter jejuni. -
Kaakoush, N.O., Miller, W.G., De Reuse, H., Mendz, G.L. 2007. Oxygen requirement and tolerance of Campylobacter jejuni. Research in Microbiology. 158(8-9):644-650.
Composite sequence proteomic analysis of protein biomarkers of Campylobacter coli, C. lari and C. concisus for bacterial identification -
Fagerquist, C.K., Yee, E., Miller, W.G. 2007. Composite sequence proteomic analysis of protein biomarkers of Campylobacter coli, C. lari and C. consisus for bacterial identification. The Analyst. 132(10):1010-1023.
Bacterial population dynamics in diary waste during aerobic and anaerobic treatment and subsequent storage. -
Mcgarvey, J.A., Miller, W.G., Zhang, R., Ma, Y., Mitloehner, F. Bacterial population dynamics in diary waste during aerobic and anaerobic treatment and subsequent storage. Applied and Environmental Microbiology. 73:193-202
IDENTIFICATION OF DISULPHIDE REDUCTASES IN CAMPYLOBACTERALES: A BIOINFORMATICS INVESTIGATION -
Kaakoush, N.O., Sterzenbach, T., Miller, W.G., Suerbaum, S., Mendz, G.L. 2007. Identification of disulphide reductases in campylobacterales. Antonie Van Leeuwenhoek. 92(4):429-441
Common Genomic Features of Campylobacter jejuni subsp. doylei Strains Distinguish Them from C. jejuni subsp. jejuni -
Parker, C., Miller, W.G., Horn, S.T., Lastovica, A.J. 2007. Common Genomic Features of Campylobacter jejuni subsp. doylei Strains Distinguish Them from C. jejuni subsp. jejuni. BMC Microbiology. http://www.biomedcentral.com/1471-2180/7/50
Detection and Genotyping of Arcobacter and Campylobacter Isolates from Retail Chicken Samples by Use of DNA Oligonucleotide Arrays -
Quinones, B., Parker, C., Janda Jr, J.M., Miller, W.G., Mandrell, R.E. 2007. Detection and Genotyping of Arcobacter and Campylobacter Isolates from Retail Chicken Samples by Use of DNA Oligonucleotide Arrays. Applied and Environmental Microbiology. 73(11)3645-3655
IDENTIFICATION OF GENOMIC DIFFERENCES BETWEEN CAMPYLOBACTER JEJUNI SUBSP. JEJUNI AND CAMPYLOBACTER JEJUNI SUBSP. DOYLEI AT THE NAP LOCUS LEADS TO THE DEVELOPMENT OF A C. JEJUNI SUBSPECIATION MULTIPLEX PCR METHOD -
Miller, W.G., Parker, C., Heath, S., Lastovica, A. 2007. Identification of genomic differences between campylobacter jejuni subsp. jejuni and C. jejuni subsp. doylei at the nap locus leads to the development of a C. jejuni subspeciation multiplex pcr method. BioMed Central Microbiology. 7:11.
Clonal Population Structure and Specific Genotypes of Multi-drug Resistant Campylobacter coli from Turkeys. -
D'Lima, C., Miller, 2007 W.G., Mandrell, R.E., Wright, S.L., Siletsky, R., Carver, D.K., Kathariou, S. Clonal Population Structure and Specific Genotypes of Multi-drug Resistant Campylobacter coli from Turkeys.. Applied and Environmental Microbiology. 73(7) 2156-2164
CAMPYLOBACTER INSULAENIGRAE ISOLATED FROM NORTHERN ELEPHANT SEALS (MIROUNGA ANGUSTIROSTRIS) IN CALIFORNIA -
Stoddard, R.A., Miller, W.G., Foley, J.E., Lawrence, J., Gullard, F.M., Conrad, P.A., Byrne, B.A. 2007. Campylobacter insulaenigrae isolated from northern elephant seals (mirounga angustirostris) in california. Applied and Environmental Microbiology. 7(6)1729-1735
ASSOCIATION OF ERYTHROMYCIN SUSCEPTIBILITY AND ABSENCE OF INTERVENING SEQUENCES IN 23S RIBOSOMAL RNA GENES OF CAMPYLOBACTER COLI ISOLATED FROM TURKEYS. -
Chan, K., Miller, W.G., Mandrell, R.E., Kathariou, S. 2007. Association of erythromycin susceptibility and absence of intervening sequences in 23s ribosomal rna genes of campylobacter coli isolated from turkeys.. Applied and Environmental Microbiology. 73(4)1208-1214
CRYPTIC PLASMIDS ISOLATED FROM CAMPYLOBACTER STRAINS REPRESENT MULTIPLE, NOVEL INCOMPATIBILITY GROUPS -
Miller, W.G., Heath, S., Mandrell, R.E. 2007. Cryptic plasmids isolated from Campylobacter strains represent multiple, novel incompatibility groups. Plasmid. 57(2):108-117.
COMPARATIVE GENOMIC ANALYSIS OF CAMPYLOBACTER JEJUNI STRAINS REVEALS DIVERSITY DUE TO GENOMIC ELEMENTS SIMILAR TO THOSE PRESENT IN C. JEJUNI STRAIN RM1221 -
Parker, C., Quinones, B., Miller, W.G., Horn, S.T., Mandrell, R.E. 2006. Comparative genomic analysis of Campylobacter jejuni strains reveals diversity due to genomic elements similar to those present in C. jejuni strain RM1221. Journal of Clinical Microbiology.44:11:4125-4135
SUB-SPECIATING CAMPYLOBACTER JEJUNI BY PROTEOMIC ANALYSIS OF ITS PROTEIN BIOMARKERS AND THEIR POST-TRANSLATIONAL MODIFICATIONS -
Fagerquist, C.K., Bates, A.H., Heath, S., King, B.C., Garbus, B.R., Harden, L.A., Miller, W.G. Sub-speciating campylobacter jejuni by proteomic analysis of its protein biomarkers and their post-translational modifications. Journal of Proteome Research. 5:10:2527-2538
Bacterial population dynamics of aerobic and anaerobic dairy waste treatment -
COMPARISON OF THE CHEMICAL COMPOSITION AND BACTERIAL POPULATION STRUCTURE OF DAIRY WASTE BEFORE AND AFTER AEROBIC AND ANAEROBIC DIGESTION -
Mcgarvey, J.A., Miller, W.G., Zhong, R., Mitloehner, F., Lathrop, J.R., Ma, Y. 2006. Comparison of the chemical composition and bacterial population structure of dairy waste before and after aerobic and anaerobic digestion. [Abstract]. American Society of Microbiology. Poster Q333.
Bacterial population dynamics during waste treatment and subsequent storage in simulated wastewater holding lagoons. -
BACTERIAL POPULATION DYNAMICS DURING WASTE TREATMENT AND SUBSEQUENT STORAGE IN SIMULATED WASTEWATER HOLDING LAGOONS. -
Mcgarvey, J.A., Miller, W.G., Mitloehner, F., Ruihong, Z., Yangu, M. 2006. Bacterial population dynamics during waste treatment and subsequent storage in simulated wastewater holding lagoons [ Abstract]. Poster B1102.
SURFACE SANITIZATION OF CANTALOUPES USING THYMOL/CINNAMALDEHYDE -
Mcgarvey, J.A., Barak Cunningham, J.D., Miller, W.G. 2005. Surface sanitization of cantaloupes using thymol/cinnamaldehyde. California Melon Research Board Annual Meeting, November 20-23, 2005, Hermosilla, MX.
BACTERIAL POPULATION STRUCTURE OF DAIRY WASTEWATERS -
Mcgarvey, J.A., Miller, W.G., Sanchez, S., Silva, C.J. 2005. Bacterial population structure of dairy wastewaters [abstract]. International Union of Microbiological Societies, July 23-28, 2005, San Francisco, CA. Poster No. B1102.
EMERGING CAMPYLOBACTER SPECIES -
Mandrell, R.E., Miller, W.G. 2006. Emerging campylobacter species. Book Chapter. Campylobacter, Motarjemi Y and Adams, M.D.(editors) Woodhead Publishing, Cambridge, UK 476-521.
BACTERIAL AND CHEMICAL COMPOSITION OF DAIRY WASTEWATER -
Mcgarvey, J.A., Miller, W.G., Sanchez, S., Silva, C.J. 2005. Bacterial and chemical composition of dairy wastewater [abstract]. American Society for Microbiology General Meeting, 6/5-6/9/05, Atlanta, GA. P. 008.
SPECIATION OF CAMPYLOBACTER COLI, C. JEJUNI, C. HELVETICUS, C. LARI, C. SPUTORUM, AND C. UPSALIENSIS BY MATRIX-ASSISTED LASER DESORPTION IONIZATION-TIME OF FLIGHT (MALDI-TOF) MASS SPECTROMETRY -
Mandrell, R.E., Harden, L.A., Bates, A.H., Miller, W.G., Haddon, W.F., Fagerquist, C.K. 2005. Speciation of campylobacter coli, c. jejuni, c. helveticus, c. lari, c. sputorum, and c. upsaliensis by matrix-assisted laser desorption ionization-time of flight (maldi-tof) mass spectrometry. Applied and Environmental Microbiology. 71:10 p. 6292-6307
GENOMIC AND PROTEOMIC IDENTIFICATION OF A DNA-BINDING PROTEIN USED IN THE "FINGERPRINTING" OF CAMPYLOBACTER SPECIES AND STRAINS BY MALDI-TOF-MS PROTEIN BIOMARKER ANALYSIS -
Fagerquist, C.K., Miller, W.G., Harden, L.A., Bates, A.H., Vensel, W.H., Wang, G., Mandrell, R.E. 2005. Genomic and proteomic identification of a dna-binding protein used in the "fingerprinting" of campylobacter species and strains by maldi-tof-ms protein biomarker analysis. Analytical Chemistry. web release 6/25/05, 77:4897-4907
COMPARISON OF BACTERIAL POPULATIONS AND CHEMICAL COMPOSITION OF DAIRY WASTEWATER HELD IN CIRCULATED AND STAGNANT LAGOONS -
Mcgarvey, J.A., Miller, W.G., Sanchez, S., Silva, C.J., Whitehand, L.C. 2005 Comparison of bacterial populations and chemical composition of dairy wastewater held in circulated and stagnant lagoons [abstract]. Journal of Applied Microbiology. 99(10):867-877.
COMPARISON OF CIRCULATED AND STAGNANT DAIRY WASTEWATERS -
McGarvey, J.A., Miller, W.G., Sanchez, S. 2005. Comparison of circulated and stagnant dairy wastewaters [abstract]. International Conference on Environmental, Industrial and Applied Microbiology, March 15-18, 2005, Badajoz, Spain. P. 71
COMPARISON OF CAMPYLOBACTER JEJUNI LOS BIOSYNTHESIS LOCI FROM A VARIETY OF SOURCES -
Parker, C., Horn, S.T., Gilbert, M., Miller, W.G., Woodward, D., Mandrell, R.E. Comparison of campylobacter jejuni los biosynthesis loci from a variety of sources. Journal of Clinical Microbiology. 43:2771-2781.
EXTENDED MULTILOCUS SEQUENCE TYPING SYSTEM FOR CAMPYLOBACTER COLI, C. LARI, C. UPSALIENSIS, AND C. HELVETICUS. -
Miller, W.G., On, S., Wang, G., Fontanoz, S., Lastovica, A., Mandrell, R.E. 2005. Extended multilocus sequence typing system for campylobacter coli, c. lari, c. upsaliensis, and c. helveticus. Journal of Clinical Microbiology. 43(5).2315-2329.
PRODUCTION OF AUTOINDUCER-2 IN SALMONELLA ENTERICA SEROVAR THOMPSON CONTRIBUTES TO ITS FITNESS IN CHICKENS BUT NOT ON CILANTRO PLANT LEAF SURFACES -
Brandl, M., Miller, W.G., Bates, A.H., Mandrell, R.E. 2005. Production of autoinducer-2 in salmonella enterica serovar thompson contributes to its fitness in chickens but not on cilantro plant leaf surfaces. Applied and Environmental Microbiology. 71(5):2653-2662.
DIVERSITY OF CAMPYLOBACTER JEJUNI TYPE I RESTRICTION-MODIFICATION LOCI. -
Miller, W.G., Pearson, B.M., Wells, J.M., Kapitonov, V.V., Mandrell, R.E. 2005. Diversity of campylobacter jejuni type i restriction-modification loci. Microbiology. 151:337-351.
MAJOR STRUCTURAL DIFFERENCES AND NOVEL POTENTIAL VIRULENCE MECHANISMS FROM THE GENOMES OF MULTIPLE CAMPYLOBACTER SPECIES -
Fouts, D.E., Mongodin, E.F., Mandrell, R.E., Miller, W.G., Rasko, D.A., Ravel, J., Brinkac, L.M., Deboy, R.T., Parker, C., Daugherty, S.C. 2005. Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species. PLoS Biology 3(1):e15.
DIFFERENTIATION OF CAMPYLOBACTER COLI, CAMPYLOBACTER JEJUNI, CAMPYLOBACTER LARI AND CAMPYLOBACTER UPSALIENSIS USING A MULTIPLEX PCR DEVELOPED FROM THE NUCLEOTIDE SEQUENCE OF THE LIPID A GENE LPXA. -
Klena, J.D., Parker, C., Knibb, K., Ibbitt, C., Devane, P.M., Horn, S.T., Miller, W.G., Konkel, M. 2004. Differentiation of campylobacter coli, campylobacter jejuni, campylobacter lari and campylobacter upsaliensis using a multiplex pcr developed from the nucleotide sequence of the lipid a gene lpxa. Journal of Clinical Microbiology. 42(12):5549-5557.
PREVALENCE OF CAMPYLOBACTER IN THE FOOD AND WATER SUPPLY: INCIDENCE, OUTBREAKS, ISOLATION AND DETECTION -
Miller, W.G., Mandrell, R.E. 2005. Prevalence of campylobacter in the food and water supply: incidence, outbreaks, isolation and detection. In: Ketley, J., Konkel, M.E., editors. Campylobacter jejuni: New Perspectives in Molecular and Cellular Biology. Norfolk, UK. Horizon Scientific Press, 101-163.
FINGERPRINTING OF CAMPYLOBACTER SPECIES AND STRAINS BY MASS SPECTROMETRIC IDENTIFICATION OF PROTEIN BIOMARKERS -
Fagerquist, C.K., Harden, L.A., Miller, W.G., Fouts, D., Nelson, K., Mandrell, R.E. 2004. Fingerprinting of campylobacter species and strains by mass spectrometric identification of protein biomarkers. In: Proceedings of the 52nd American Society for Mass Spectrometry Conference and Allied Topics. May 23-27, 2004 Nashville, TN. CDROM
IDENTIFICATION OF BACTERIAL POPULATIONS IN DAIRY WASTEWATERS BY USE OF 16S RRNA GENE SEQUENCES AND OTHER GENETIC MARKERS -
McGarvey, J.A., Miller, W., Sanchez, S., Stanker, L.H. 2004. Identification of bacterial populations in dairy wastewaters by use of 16S rRNA gene sequences and other genetic markers. Applied and Environmental Microbiology. 70(7):4267-4275.
IDENTIFICATION OF BACTERIAL POPULATIONS IN AGRICULTURAL WASTE WATER USING 16S RDNA SEQUENCES AND OTHER GENETIC MARKERS. -
Mcgarvey, J.A., Stanker, L.H., Ravva, S.V., Miller, W.G., Sanchez, S. 2004. Identification of bacterial populations in agricultural waste water using 16s rdna sequences and other genetic markers [Abstract]. American Society for Microbiology Meeting. Poster Q030.
BACTERIAL ANALYSIS OF DAIRY WASTEWATER, A MOLECULAR APPROACH -
McGarvey, J.A., Ravva, S.V., Stanker, L.H., Miller, W.G., Sanchez, S. Bacterial analysis of dairy wastewater, a molecular approach. Meeting Abstract.
COLONIZATION OF ARABIDOPSIS THALIANA WITH SALMONELLA ENTERICA AND ENTEROHEMORRHAGIC ESCHERICHIA COLI 157:H7 AND COMPETITIAN BY ENTEROBACTOR ASBURIAE -
COOLEY, M.B., MILLER, W.G., MANDRELL, R.E. COLONIZATION OF ARABIDOPSIS THALIANA WITH SALMONELLA ENTERICA AND ENTEROHEMORRHAGIC ESCHERICHIA COLI 157:H7 AND COMPETITIAN BY ENTEROBACTOR ASBURIAE. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2003. v 68(8) p.4915-4926
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Last Modified: 5/2/2016
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