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ARS Home » Southeast Area » Mississippi State, Mississippi » Crop Science Research Laboratory » Genetics and Sustainable Agriculture Research » People & Locations » Dewayne Deng
Dewayne Deng (PhD)
Genetics and Sustainable Agriculture Research
Biologist (Computational/Bioinformatics)

Phone: (662) 320-7514
Fax:

(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)

Projects
Dynamic, Data-Driven, Sustainable, and Resilient Crop Production Systems for the U.S.
In-House Appropriated (D)
  Accession Number: 445492
Dynamic, Data-Driven, Sustainable, and Resilient Crop Production Systems for the U.S.
Non-Assistance Cooperative Agreement (S)
  Accession Number: 443825
Dynamic, Data-Driven, Sustainable, and Resilient Crop Production Systems for the U.S.
Non-Assistance Cooperative Agreement (S)
  Accession Number: 443866

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Co-existing anammox, ammonium-oxidizing, and nitrite-oxidizing bacteria in biocathode-biofilms enable energy-efficient nitrogen removal in bioelectrochemical desalination process Reprint Icon - (Peer Reviewed Journal)
Ghimire, U., Gude, V.G., Brooks, J.P., Smith, R.K., Deng, D.D. 2021. Co-existing anammox, ammonium-oxidizing, and nitrite-oxidizing bacteria in biocathode-biofilms enable energy-efficient nitrogen removal in bioelectrochemical desalination process. Chemical Engineering Journal. 9(14):4967-4979. https://doi.org/10.1021/acssuschemeng.0c07883.
A novel variant of Gh_D02G0276 is required for Root-Knot nematode resistance on chromosome 14 in Upland Cotton Reprint Icon - (Peer Reviewed Journal)
Wubben, M., Thyssen, G.N., Callahan, F.E., Fang, D.D., Deng, D.D., Mccarty Jr, J.C., Li, P., Islam, M.S., Jenkins, J.N. 2019. A novel variant of Gh_D02G0276 is required for Root-Knot nematode resistance on chromosome 14 in Upland Cotton. Theoretical and Applied Genetics. 2019)132:1425–1434. https://doi.org/10.1007/s00122-019-03289-1.
Genetic diversity of day-neutral converted landrace, Gossypium hirsutum L., accessions Reprint Icon - (Peer Reviewed Journal)
McCarty Jr, J.C., Deng, D.D., Jenkins, J.N., Geng, L. 2018. Genetic diversity of day-neutral converted landrace, Gossypium hirsutum L., accessions. Euphytica. 214:173. https://doi.org/10.1007/s10681-018-2264-6.
Introgression of Gossypium barbadense L. into Upland cotton germplasm RMBUP-C4S1 Reprint Icon - (Peer Reviewed Journal)
Jenkins, J.N., McCarty Jr, J.C., Deng, D.D., Geng, L., Hayes, R.W., Jones, D.C., Mammadova, R. 2018. Introgression of Gossypium barbadense L. into Upland cotton germplasm RMBUP-C4S1. Euphytica. 214:118. https://doi.org/10.1007/s10681-018-2200-9.
Recent developments in fiber genomics of tetraploid cotton species Reprint Icon - (Book / Chapter)
Ayubov, M.S., Abdurakhmonov, I.Y., Sripathi, V.R., Saha, S., Norov, T.M., Buriev, Z.T., Shermatov, S.E., Ubaydullaeva, K.A., Mccarty Jr, J.C., Deng, D.D., Jenkins, J.N. 2017. Recent developments in fiber genomics of tetraploid cotton species. Cotton. 6:123-152. 10.5772/intechopen.72922.
Individual and combined contributions of the Renbarb1, Renbarb2, and Renbarb3 quantitative trait loci to reniform nematode (Rotylenchulus reniformis Linford & Oliveira) resistance in Upland Cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)
Wubben, M., McCarty Jr, J.C., Jenkins, J.N., Callahan, F.E., Deng, D.D. 2017. Individual and combined contributions of the Renbarb1, Renbarb2, and Renbarb3 quantitative trait loci to reniform nematode (Rotylenchulus reniformis Linford & Oliveira) resistance in Upland Cotton (Gossypium hirsutum L.). Euphytica. 213:1-9.
Registration of six germplasm lines of cotton, Gosspyium hirsutum L. with resistance to root-knot and reniform nematodes Reprint Icon - (Germplasm Registration)
Mccarty Jr, J.C., Jenkins, J.N., Wubben, M., Hayes, R.W., Callahan, F.E., Deng, D.D. 2017. Registration of six germplasm lines of cotton, Gosspyium hirsutum L. with resistance to root-knot and reniform nematodes. Journal of Plant Registrations. 11:168-171.
A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton Reprint Icon - (Peer Reviewed Journal)
Islam, M.S., Thyssen, G.N., Jenkins, J.N., Zeng, L., Delhom, C.D., McCarty, J.C., Deng, D.D., Hinchliffe, D.J., Jones, D.C., Fang, D.D. 2016. A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton. BMC Genomics. 17:903. https://doi.org/10.1186/s12864-016-3249-2.
Coupling of MIC-3 overexpression with the chromosome 11 and 14 root-knot nematode (RKN) (Meloidogyne incognita) resistance QTLs provides insights into the regulation of the RKN resistance response in Upland cotton... Reprint Icon - (Peer Reviewed Journal)
Wubben, M., Callahan, F.E., Jenkins, J.N., Deng, D.D. 2016. Coupling of MIC-3 overexpression with the chromosome 11 and 14 root-knot nematode (RKN) (Meloidogyne incognita) resistance QTLs provides insights into the regulation of the RKN resistance response in Upland cotton.... Theoretical and Applied Genetics. 129:1759-1767.
Effects of low-grade weirs on soil microbial communities to advance agricultural best management practices for nitrate remediation - (Peer Reviewed Journal)
Molecular confirmation of Gossypium hirsutum chromosome substitution lines - (Peer Reviewed Journal)
Saha, S., Stelly, D.M., Makamov, A.K., Ayubov, M., Raska, D., Gutierrez, O.A., Manchali, S., Jenkins, J.N., Deng, D.D., Abdurakhmonov, I.Y. 2016. Molecular confirmation of Gossypium hirsutum chromosome substitution lines. Genetica. 144(3):289-306.
Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)
Fang, D.D., Jenkins, J.N., Deng, D.D., McCarty Jr, J.C., Li, P., Wu, J. 2014. Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.). Biomed Central (BMC) Genomics. 15:397.
A microsatellite-based genome-wide analysis of genetic diversity and linkage disequilibrium in Upland cotton (Gossypium hirsutum L.) cultivars from major cotton-growing countries - (Peer Reviewed Journal)
Fang, D.D., Hinze, L.L., Percy, R.G., Li, P., Deng, D.D., Thyssen, G.N. 2013. A microsatellite-based genome-wide analysis of genetic diversity and linkage disequilibrium in Upland cotton (Gossypium hirsutum L.) cultivars from major cotton-growing countries. Euphytica. 191:391-401.
Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode - (Peer Reviewed Journal)
McCarty Jr., J.C., Jenkins, J.N., Wubben, M., Gutierrez, O.A., Hayes, R.W., Callahan, F.E., Deng, D.D. 2013. Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode. Journal of Plant Registrations. 7:220-223.
Association of SSR markers with important fiber traits in Upland cotton - (Abstract Only)
Saha, S., Emgamberdiev, S.S., Wu, J., Jenkins, J.N., McCarty Jr, J.C., Deng, D.D., Abdurakhmonov, I. 2012. Association of SSR markers with important fiber traits in Upland cotton [abstract]. National Cotton Council Beltwide Cotton Conference. p. 754.
SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)
Jenkins, J.N., McCarty Jr., J.C., Wubben, M.J., Hayes, R.W., Gutierrez, O.A., Callahan, F.E., Deng, D.D. 2012. SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.). Euphytica. 183:49-54.