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United States Department of Agriculture

Agricultural Research Service

Animal Disease/Parasite Resistance
item Biochemical reference intervals for Flavobacterium psychrophilum -resistant and -susceptible rainbow trout lines, and pathophysiological changes after experimental infection (Oct 2014)
item Complete genome sequence of Flavobacterium psychrophilum strain CSF259-93 used to select rainbow trout for increased genetic resistance against bacterial cold water disease (Sep 2014)
item Weissellosis (Sep 2014)
item Weissellosis – An important emerging disease in farmed rainbow trout (Sep 2014)
item Identification Of O-antigen biosynthetic genes specific to Serovar 01 Yersinia Ruckeri: Role in virulence and protective immunity (Sep 2014)
item Genetic improvement of disease resistance in salmonid fish using selective breeding: Overview of concepts, considerations and limitations (Sep 2014)
item Evaluating innate resistance to Flavobacterium Columnare in rainbow trout (Oncorhynchus mykiss) (Sep 2014)
item Exploring mechanisms of survival in rainbow trout selectively bred for increased resistance to Flavobacterium psychrophilum (Sep 2014)
item From the laboratory to the field: The performance of a selectively bred line of Rainbow Trout (Oncorhynchus mykiss) under commercial production conditions (Sep 2014)
item Marek’s Disease Virus influences the core gut microbiome of the chicken during the early and late phases of viral replication (Aug 2014)
item Filling the knowledge gap: Integrating quantitative genetics and genomics in graduate education and outreach (Aug 2014)
item Association of TMEM154 missense mutations with lentiviral infection and virus subtypes in sheep (Aug 2014)
item Histopathologic changes in disease-resistant-line and sdisease-susceptible-line juvenile rainbow trout experimentally infected with Flavobacterium psychrophilum (Aug 2014)
item B cell signatures of BCWD-resistant and susceptible lines of rainbow trout: a shift towards more EBF-expressing progenitors and fewer mature B cells in resistant animals (Aug 2014)
item Systematic Differences in the Response of Genetic Variation to Pedigree and Genome Based Selection Methods (Jul 2014)
item Influence of Marek’s disease virus on the core-gut microbiome of chickens resistant or susceptible to Marek’s disease (Jul 2014)
item Genomic selection for genetic resistance to Marek's disease (Jul 2014)
item LincRNAs in CD4+ T cells and Marek’s disease (Jul 2014)
item Characterizing a point mutation within the UL5 gene that reduces in vivo replication and MD incidence (Jul 2014)
item Differential expression profiling of miRNAs between Marek’s disease resistant and susceptible chickens (Jul 2014)
item Integration of selective breeding and vaccination to improve disease resistance in aquaculture: Application to control bacterial cold water disease (Jul 2014)
item Mapping and genotypic analysis of NK-lysin gene in chicken (Jul 2014)
item The cellular and molecular etiology of the craniofacial defects in the avian ciliopathic mutant talpid2 (Jul 2014)
item Evaluation of anthelmintic resistance of intestinal parasitic nematodes in heifers in south central Nebraska (Jul 2014)
item Weissellosis in trout aquaculture in North America: an aggressive vaccination campaign against an emerging pathogen (Jun 2014)
item QTL for bacterial cold water disease resistance and spleen size are located on rainbow trout chromosome Omy19 (Jun 2014)
item An overview of live attenuated recombinant pseudorabies viruses for use as novel vaccines (Jun 2014)
item Effect of dietary antimicrobials on immune status in broiler chickens (Jun 2014)
item Biomolecular and metagenomic analyses of biofouling communities (Jun 2014)
item Genomewide association study of reproductive efficiency in female cattle (May 2014)
item Ostertagia ostertagi macrophage migration inhibition factor is present at all developmental stages and may cross-regulate host functions through host receptor (May 2014)
item Effect of in ovo injection with selenium on immune and antioxidant responses during experimental necrotic enteritis in broiler chickens (May 2014)
item Genetic improvement through selective breeding: Part of an integrated strategy to reduce disease loss and Antibiotic use (Apr 2014)
item Identification of O-Antigen biosynthetic genes specific to Serovar 01 Yersinia Ruckeri: Role in virulence and protective immunity (Apr 2014)
item SNPs for parentage testing and traceability in globally diverse breeds of sheep (Apr 2014)
item Flavobacterium branchiophilum and F. succinicans associated with bacterial gill disease in rainbow trout Oncorhynchus mykiss (Walbaum) in water recirculation aquaculture systems (Apr 2014)
item gga-miR-375 plays a key role in tumorigenesis post subgroup J Avian Leukosis Virus infection (Apr 2014)
item Vaccination against salmonid bacterial kidney disease (Mar 2014)
item Development and characterization of mouse monoclonal antibodies reactive with chicken TL1A (Feb 2014)
item Effect of Bacillus subtilis-based direct-fed microbials on immune status in broiler chickens raised on fresh or used litter (Feb 2014)
item Comparison of live Eimeria vaccination with in-feed Salinomycin on growth and immune status in broiler chickens (Feb 2014)
item Differential expression of Toll-like receptor pathway genes in chicken embryo fibroblasts from chickens resistant and susceptible to Marek’s disease (Feb 2014)
item Sequencing a North American yak genome (Feb 2014)
item The gut immune system: A new frontier in gut health research (Feb 2014)
item Host genetic resistance to Marek’s disease sustains protective efficacy of herpesvirus of turkey in both experimental and commercial lines of chickens (Feb 2014)
item Complete closed genome sequences of three Bibersteinia trehalosi nasopharyngeal isolates from cattle with shipping fever (Feb 2014)
item Complete closed genome sequences of four Mannheimia varigena isolates from cattle with shipping fever (Feb 2014)
item Mapping whole genome shotgun sequence and variant calling in mammalian species without their reference genomes (Feb 2014)
item Modulation of microRNAs in two genetically disparate chicken lines showing different susceptibility levels of necrotic enteritis (Jan 2014)
item Effect of in ovo vaccination and anticoccidials on the distribution of Eimeria spp. in poultry litter and serum antibody titers against coccidia in broiler chickens raised on used litter (Jan 2014)
item Phylogeographic characteristics of vesicular stomatitis New Jersey viruses circulating in Mexico from 2005-2011 and their relationship to epidemics in the United States (Jan 2014)
item Preliminary analysis of microRNA transcriptome altered by vaccine and Marek’s disease virus in chickens (Jan 2014)
item Characterization of microbiomes related to respiratory disease in cattle (Jan 2014)
item SNPs for parentage testing and traceability in globally diverse breeds of sheep (Jan 2014)
item Early life stage rainbow trout (Oncohynchus mykiss) mortalities due to Flavobacterium columnare in Idaho, USA (Jan 2014)
item Elongation Factor-1a is a novel protein associated with host cell invasion and a potential protective antigen of Cryptosporidium parvum* (Dec 2013)
item Relative disease susceptibility and clostridial toxin antibody responses in three commercial broiler lines co-infected with Clostridium perfringens and Eimeria maxima using an experimental model of necrotic enteritis (Dec 2013)
item Tetraspanin-3 regulates protective immunity against Eimera tenella infection following immunization with dendritic cell-derived exosomes (Dec 2013)
item Acute mortality, bacterial load and pathology of select lines of adult rainbow trout challenged with Weissella sp. NC36 (Dec 2013)
item Chicken IL-17F: Identification and comparative expression analysis in Eimeria-Infected chickens (Dec 2013)
item Transfer of serum and cells from Yersinia ruckeri vaccinated double-haploid Hot Creek Rainbow trout into outcross F1 progeny elucidates mechanisms of vaccine-induced protection (Dec 2013)
item Dietary supplementation of young broiler chickens with Capsicum and turmeric oleoresins increases resistance to necrotic enteritis (Dec 2013)
item Montanide ISA 71 VG adjuvant enhances antibody and cell-ediated immune responses to profilin subunit antigen vaccination and promotes protection against Eimeria acervulina and Eimeria tenella (Dec 2013)
item Evaluation of Montanide ISA 71 VG adjuvant during profilin vaccination against experimental coccidiosis (Nov 2013)
item Identification and comparative expression analysis of interleukin 2/15 receptor B chain in chickens infected with E. tenella (Nov 2013)
item Effects of anticoccidial and antibiotic growth promoter programs on broiler performance and immune status (Nov 2013)
item A monogenean without clamps (Nov 2013)
item Microevolution of Renibacterium salmoninarum: evidence for intercontinental dissemination associated with fish movements (Oct 2013)
item Clostridium Perfringens a-Toxin and NetB Toxin Antibodies and their possible role in protection against Necrotic Enteritis and Gangrenous Dermatitis in broiler chickens (Oct 2013)
item A simple and efficient method for isolation of a single Eimeria oocyst from poultry litter using a micromanipulator (Oct 2013)
item Transcriptional profiling of Meq-dependent genes in Marek’s disease resistant and susceptible inbred chicken lines (Oct 2013)
item Assessment of genetic correlation between bacterial cold water disease resistance and spleen index in a domesticated population of rainbow trout: Identification of QTL on chromosome Omy19 (Oct 2013)
item The Genetic Architecture of Genetic Resistance to Marek's Disease (Sep 2013)
item Recent progress in the understanding of host immunity to avian coccidiosis: IL-17 family cytokines as the sentinels on the intestinal mucosa (Sep 2013)
item Reducing assembly complexity of microbial genomes with single-molecule sequencing (Sep 2013)
item Recent progress in the understanding of host immunity to avian coccidiosis: IL-17 family cytokines as the sentinels on the intestinal mucosa (Aug 2013)
item Parasiticidal activity of a novel synthetic peptide from the core a-helical region of NK-lysin (Aug 2013)
item Small ruminant lentivirus genetic subgroups associate with sheep TMEM154 genotypes (Jul 2013)
item Recent progress in understanding host immunity to Avian Coccidiosis: Role of IL-17 Family Cytokines (Jul 2013)
item An extensive comparison of the effect of anthelmintic classes on diverse nematodes (Jul 2013)
item Characterization of Neospora caninum macrophage migration inhibitory factor (Jul 2013)
item Transferable green fluorescence-tagged pEI2 in Edwardsiella ictaluri (Jul 2013)
item Bacillus thuringiensis-derived Cry5B has potent anthelmintic activity against Ascaris suum (Jun 2013)
item Aquacultured rainbow trout (Oncorhynchus mykiss) possess a large core intestinal microbiota that is resistant to variation in diet and rearing density (Jun 2013)
item Integrated analyses of genome-wide DNA occupancy and expression profiling identify key genes and pathways involved in cellular transformation by the Marek's disease virus oncoprotein Meq (Jun 2013)
item Effects of various field coccidiosis control programs on host innate and adaptive immunity in commercial broiler chickens (Jun 2013)
item Visualization of Marek’s disease virus in vitro using enhanced green fluorescent protein fused with US10 (May 2013)
item The methylome and virulence of bovine respiratory disease bacterial pathogens (May 2013)
item Complete closed genome sequences of Mannheimia haemolytica serotypes A1 and A6 isolated from cattle (May 2013)
item Identification of blaOXA-51, blaOXA-58, blaDIM-1 and blaVIM carbapenemase genes in hospital enterobacteriaceae isolates from Sierra Leone (May 2013)
item Examination of resistance and tolerance in rainbow trout bred for differential susceptibility to bacterial cold water disease (May 2013)
item Neospora caninum surface antigen (p40) is a potential diagnostic marker for cattle neosporosis (May 2013)
item Accumulation of PrP-Sc in hemal nodes of naturally and experimentally scrapie-infected sheep (Apr 2013)
item Identification of single nucleotide polymorphisms (SNPs)associated to Red Maasai x Dorper resistance to gastrointestinal parasite infections (Apr 2013)
item Coccidiosis in poultry – new trends for control (Apr 2013)
item Dnmt Gene Expression and Methylome in Marek’s Disease Resistant and Susceptible Chickens Prior to and Following Infection by Mdv (Apr 2013)
item Efficacy of antemortem rectal biopsies to diagnose and estimate prevalence of chronic wasting disease in free-ranging elk (Cervus elaphus nelsoni) (Apr 2013)
item Development of sustainable strategies to mitigate the use of antibiotics and maintain gut homeostasis in intestinal dysbiosis (Mar 2013)
item On-farm performance of rainbow trout (Oncorhynchus mykiss) selectively bred for resistance to bacterial cold water disease: effect of rearing environment on survival phenotype (Mar 2013)
item Granule-exocytosis of granulysin and granzyme B as a potential key mechanism in vaccine-induced immunity in cattle against the nematode ostertagia ostertagi (Mar 2013)
item Linkage between anaplasma marginale outer membrane proteins enhances immunogenicity, but is not required for protection from challenge (Feb 2013)
item Flavobacterium Columnare studies in rainbow trout (Oncorhynchus mykiss) (Feb 2013)
item The pathophysiology of bacterial cold water disease in selectively-bred rainbow trout (Feb 2013)
item Spleen size is an indirect indicator of rainbow trout bacterial cold water disease resistance (Feb 2013)
item Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora (Feb 2013)
item Application of SMRT genome sequencing to reveal the methylomes of bacteria associated with respiratory disease outbreaks in beef cattle (Feb 2013)
item Deep sequencing of immune repertoires during bovine development and in response to respiratory pathogen challenge (Feb 2013)
item Genome sequence of Weissella ceti NC36, an emerging pathogen of farmed rainbow trout in the United States (Feb 2013)
item Genetic testing for TMEM154 mutations associated with lentivirus susceptibility in sheep (Feb 2013)
item Does resistance to Marek’s disease select for specific gut microflora that play a role in influencing the host immune response (Feb 2013)
item Characterization of ovine Nectin-4, a novel peste des petits ruminants virus (PPRV) receptor (Feb 2013)
item DNA methylation down-regulates EGFR expression in chicken (Feb 2013)
item Mortality associated with Weissellosis (Weissella sp.) in USA farmed rainbow trout: Potential for control by vaccination (Feb 2013)
item Rhodotorula minuta fungemia in a ewe lamb (Jan 2013)
item Identification of specific long noncoding RNA profiles in chicken with different susceptibility to Marek's disease (Jan 2013)
item Genome-wide copy number variant analysis in inbred chickens lines with different susceptibility to Marek's disease (Jan 2013)
item Marek's Disease Virus Infection Induces Widespread Differential Chromatin Marks in Inbred Chicken Lines (Jan 2013)
item Identification of direct gene targets that the MDV oncoprotein Meq regulates via ChIP and expression analyses (Jan 2013)
item Host Genetics and Vaccine Efficacy: Global gene expression differentiation induced by vaccine and MDV in MD resistant and susceptible chickens based on Next-Gen RNA-Seq reads (Jan 2013)
item Genetic testing for TMEM154 mutations associated with lentivirus susceptibility in sheep (Jan 2013)
item Complete genome assemblies and methylome characterization in infectious diseases (Jan 2013)
item Molecular identification of duck and quail common cytokine receptor gamma chain genes (Dec 2012)
item Montanide(TM) ISA 71 VG adjuvant increases protection against experimental necrotic enteritis in commercial broiler chickens following vaccination with Clostridium perfringens recombinant proteins (Dec 2012)
item Montanide ISA 71 VG adjuvant enhances antibody and cell-mediated immune responses to profilin subunit antigen vaccination and promotes protection against Eimeria acervulina and Eimeria tenella (Dec 2012)
item Development and Characterization of Mouse Monoclonal Antibodies Reactive with Chicken CD83 (Dec 2012)
item A real-time polymerase chain reaction assay for identification and quantification of Flavobacterium psychrophilum and application to disease resistance studies in selectively bred rainbow trout (Dec 2012)
item ARS Research Review on "recent Progress in Developing Alternative Strategies to Antibiotics in Poultry Production" (Dec 2012)
item Porcine macrophage Cdelta2+ and Cdelta2- cell lines support influenza virus infection and replication and Cdelta2+ cells mount innate immune responses to influenza virus infection (Dec 2012)
item Discovery of a novel, monocationic, small-molecule inhibitor of scrapie prion accumulation in cultured sheep microglia and rov cells PLoS one (Nov 2012)
item TLR agonists are highly effective at eliciting functional memory CTLs of effector memory phenotype in peptide immunization (Nov 2012)
item Identification and evolution of Shiga Toxin-producing Escherichia coli O157 genetic subtypes (Nov 2012)
item Consistent divergence times and allele sharing measured from cross-species application of SNP chips developed for three domestic species (Nov 2012)
item ARS Research Review on "novel Immunotherapeutics As Alternatives to Antimicrobial Growth Promoters for Enteric Pathogens: An Update on the Mode of Action" (Oct 2012)
item Approaches to improve poultry vaccination using novel poultry adjuvants against coccidiosis (Oct 2012)
item Field evaluation of rainbow trout selectively bred for resistance to bacterial cold water disease (Oct 2012)
item Dietary phytonutrients enhance gut innate immunity, modulate gut microbiota and improve disease resistance to coccidiosis and necrotic enteritis in broiler chickens (Sep 2012)
item Phylogenetic clades of ovine progressive pneumonia virus (OPPV) associate with sheep TMEM154 genotypes (Sep 2012)
item Diagnostic accuracy of rectal mucosa biopsy testing for chronic wasting disease within white-tailed deer (Odocoileus virginianus) herds in North America:Effects of age,sex,polymorphism at PRNP codon 96,and disease progression (Sep 2012)
item Novel anti-infective molecule from innate immune cells as an antibiotic-alternative to control infections caused by Apicomplexa (Aug 2012)
item Exploring metazoan evolution through dynamic and holistic changes in protein families and domains (Aug 2012)
item Genus vesiculoviruses (Aug 2012)
item Analysis of global transcriptional responses of chicken following primary and secondary Eimeria acervulina infections (Jul 2012)
item Differential immunoreactivity of goat derived scrapie following in vitro misfolding versus mouse bioassay (Jul 2012)
item Full length genome analysis of Vesicular Stomatitis New Jersey Virus strains representing the phylogenetic and geographic diversity of the virus (Jul 2012)
item Identification and cloning of two immunogenic Clostridium perfringens proteins, elongation factor Tu and pyruvate:ferredoxin oxidoreductase of C. perfringens (Jul 2012)
item Understanding species-dependant host response to Eimeria spp using comparative transcriptional analysis (Jul 2012)
item First identification of regulatory B cell subsets expressing IL-10 in teleost fish (Jul 2012)
item Assembled sequence contigs by SOAPdenova and Volvet algorithms from metagenomic short reads of a new bacterial isolate of gut origin (Jun 2012)
item Metagenomic sequences of host associated gut microbiome in response to helminth infections. (Jun 2012)
item RNA sequences of the bovine epithelial transcriptome (Jun 2012)
item Whole genome shotgun sequences for a novel Salmonella strain (Jun 2012)
item Whole genome shotgun metagenomic sequences from the proximal colon microbiota in response to helminth parasites (Jun 2012)
item The transcriptomic profiles of Giardia duodenalis infected calves (Jun 2012)
item Improved resistance to Eimeria acervulina infection in chickens due to dietary supplementation with garlic metabolites (Jun 2012)
item Comparative microarray analysis of intestinal lymphocytes following Eimeria acervulina, E. maxima, or E. tenella infection in the chicken (Jun 2012)
item Evaluation of novel adjuvant Eimeria profilin complex on intestinal host immune responses against live E. acervulina challenge infection (Jun 2012)
item Differential gene expression profiles of ß-defensins in the crop, intestine, and spleen using a necrotic enteritis model in two commercial broiler chicken lines (Jun 2012)
item The long view: A selective review of 40 years of coccidiosis research (Jun 2012)
item Sequences from the hypervariable V3-V5 regions of the 16S rRNA gene amplified from the porcine proximal colon (Jun 2012)
item Experimental oral transmission of chronic wasting disease to reindeer (Rangifer tarandus tarandus) (Jun 2012)
item Comparative analyses of transcriptomic profiles of the bovine small intestine in response to both a primary infection and a drug-attenuated reinfection (Jun 2012)
item Identification and cloning of two immunogenic C. perfringens proteins, elongation factor Tu (EF-Tu) and pyruvate:ferredoxin oxidoreductase (PFO) of Clostridium perfringens (Jun 2012)
item Field evaluation of rainbow trout selectively bred for resistance to bacterial cold water disease (Jun 2012)
item Regulatory networks and pathways in the bovine small intestine during Cooperia oncophora infection (Jun 2012)
item Complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle (Jun 2012)
item Metagenomic sequences of the bovine abomasal microbiota of immune cattle in response to parasitic nematode Ostertagia ostertagi (Jun 2012)
item Butyrate enhances disease resistance of chickens by inducing antimicrobial host defense peptide gene expression (Jun 2012)
item Enhanced egress of intracellular Eimeria tenella sporozoites by splenic lymphocytes from coccidia-infected chickens (Jun 2012)
item Induction of protective immunity against Eimeria tenella, Eimeria maxima, and Eimeria acervulina infections using DC-derived exosomes (Jun 2012)
item The effects of simple and disposable chicken cages for experimental Eimeria infections (Jun 2012)
item Protective effects of Aloe vera-based diets in Eimeria maxima-infected broiler chickens (Jun 2012)
item Distinct immunoregulatory properties of macrophage migration inhibitory factors encoded by Eimeria parasites and their chicken host (Jun 2012)
item Role of dietary phytochemicals in modulating local innate immunity and as alternatives to growth promoting antibiotics to reduce inflammation (Jun 2012)
item Gene expression profiling of a temperature-sensitive strain of Neospora caninum (May 2012)
item Recent progress in understanding host mucosal response to avian coccidiosis and development of alternative strategies to mitigate the use of antibiotics in animal production (May 2012)
item Cinnamaldehyde enhances in vitro parameters of immunity and reduces in vivo infection against avian coccidiosis (May 2012)
item Impact of fresh or used litter on the post-hatch immune system of commercial broilers (May 2012)
item Prevalence and cross-immunity of Eimeria species on Korean chicken farms (May 2012)
item Characterization of chicken dendritic cell markers (May 2012)
item Reduced OPP susceptibility in naturally exposed lambs with homozygous TMEM154 K35 genotypes (May 2012)
item Effects of stress on endocrine and metabolic processes and redirection: Crosstalk between subcellular compartments (May 2012)
item Effects of dietary plant-derived phytonutrients on the genome-wide profiles and coccidiosis resistance in the broiler chickens (Apr 2012)
item Modulation of rainbow trout (Oncorhynchus mykiss) intestinal immune gene expression following bacterial challenge (Mar 2012)
item Application of combined SMRT and long-read pyrosequencing to produce reference genome sequences of bacteria associated with respiratory disease outbreaks in beef cattle (Feb 2012)
item Development of a SNP panel for parentage assignment in sheep (Jan 2012)
item Effects of novel vaccine/adjuvant complexes on the protective immunity against Eimeria acervulina and transcriptome profiles (Jan 2012)
item Whole genome sequencing: the future for molecular epidemiological studies on aquatic pathogens (Sep 2011)
item Rapid genotyping assays for the identification and differentiation of Yersinia ruckeri biotype 2 strains (Jul 2011)
item Characterisation of a serotype O1 Yersinia ruckeri isolate from the Isle of Man: further evidence that O antigen serotype is not a reliable indicator of virulence (Jun 2011)
item Independent emergence of biotype 2 Yersinia ruckeri in the United States and Europe (May 2011)
item Origin and evolution of TNF and TNF receptor superfamilies (Apr 2011)
item Intestinal immune gene response to bacterial challenge in rainbow trout (Oncorhynchus mykiss) (Mar 2011)
item Preliminary field evaluation of rainbow trout selectively bred for increased resistance to bacterial cold water disease (Feb 2011)
item Comparative genomic analysis of bacteriophages specific to the channel catfish pathogen Edwardsiella ictaluri (Jan 2011)
item Multiple independent emergence of biotype 2 Yersinia ruckeri in the United States and Europe (Sep 2010)
item Applying Selective Breeding And Vaccination To Improve Fish Health (May 2010)
Last Modified: 9/20/2013
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