Page Banner

United States Department of Agriculture

Agricultural Research Service

Animal Selection & Heterosis
item The use of PacBio and Hi-C data in denovo assembly of the goat genome (Nov 2015)
item Genomic prediction of disease occurrence using producer-recorded health data: A comparison of methods (May 2015)
item Short communication: Analysis of genomic predictor population for Holstsin dairy cattle in the United States – Effects of sex and age (Apr 2015)
item Impact of genomic collaboration and the need to continually improve methods (Mar 2015)
item Rapid calculation of genomic evaluations for new animals (Mar 2015)
item A genome-wide association study for clinical mastitis in first parity US Holstein cows using a single-step approach and a genomic matrix re-weighting procedure (Feb 2015)
item Dissection of genomic correlation matrices of US Holsteins using multivariate factor analysis (Feb 2015)
item selectSNP – An R package for selecting SNPs optimal for genetic evaluation (Jan 2015)
item Comparison of CNVs in Buffalo with other species (Jan 2015)
item Incidence of infection in 39-month-old ewes with TMEM154 diplotypes "1 1," "1 3," and "3 3" after natural exposure to ovine progressive pneumonia virus (Jan 2015)
item Use of robust multivariate linear mixed models for estimation of genetic parameters for carcass traits in beef cattle (Dec 2014)
item CAPN1, CAST, and DGAT1 genetic effects on preweaning performance, carcass quality traits, and residual variance of tenderness in a beef cattle population selected for haplotype and allele equalization (Dec 2014)
item Comparison of single-trait to multi-trait national evaluations for yield, health, and fertility (Dec 2014)
item Genetic base changes for December 2014 (Oct 2014)
item Evaluation of an experimental irradiated oocysts vaccine to protect broiler chicks against avian coccidosis (Oct 2014)
item Net merit as a measure of lifetime profit: 2014 revision (Oct 2014)
item Beef cattle body temperature during climatic stress: a genome-wide association study (Aug 2014)
item Is there a genetic solution to bovine respiratory disease complex? (Aug 2014)
item Large effects on birth weight follow inheritance pattern consistent with gametic imprinting and X chromosome (Aug 2014)
item Selection enhanced estimates of µ-calpain, calpastatin, and dacylglycerol O-acyltransferase 1 genetic effects on pre-weaning performance, carcass quality traits, and residual variance of tenderness in composite ... cattle (Aug 2014)
item Including cow information in genomic prediction of Holstein dairy cattle in the US (Aug 2014)
item Using haplotypes to unravel the inheritance of Holstein coat color for a larger audience (Aug 2014)
item Using the whole read: structural variant detection using NGS data (Aug 2014)
item Increasing the number of single nucleotide polymorphisms used in genomic evaluations of dairy cattle (Aug 2014)
item Approximation of reliability of direct genomic breeding values (Aug 2014)
item Single nucleotide polymorphisms in candidate genes related to daughter pregnancy rate in Holstein cows (Aug 2014)
item The hunt for a functional mutation affecting conformation and calving traits on chromosome 18 in Holstein cattle (Aug 2014)
item Improving genomic prediction for Danish Jersey using a joint Danish-US reference population (Aug 2014)
item Fast imputation using medium- or low-coverage sequence data (Aug 2014)
item Impact of adding foreign genomic information on Mexican Holstein imputation (Aug 2014)
item Increasing predictive ability using dominance in genomic selection (Aug 2014)
item Improvement of prediction ability for genomic selection of dairy cattle by including dominance effects (Aug 2014)
item The development of genomics applied to dairy breeding (Aug 2014)
item Multi-trait, multi-breed conception rate evaluations (Jul 2014)
item Calculation and delivery of US genomic evaluations for dairy cattle (Jul 2014)
item Determination of single nucleotide polymorphisms associated with subclinical ketosis in Jersey cattle (Jul 2014)
item An updated version of lifetime net merit incorporating additional fertility traits and new economic values (Jul 2014)
item Systems biology approaches to understanding conceptus elongation and early pregnancy loss (Jul 2014)
item Development of a lifetime merit-based selection index for US dairy grazing systems (Jul 2014)
item Genomic evaluation, breed identification, and discovery of a haplotype affecting fertility for Ayrshire dairy cattle (Jun 2014)
item Genotypes are useful for more than genomic evaluation (May 2014)
item Genotypes are useful for more than genomic evaluation (May 2014)
item Expression of digestive enzymes and nutrient transporters in Eimeria acervulina-challenged layers and broilers (May 2014)
item Short communication: Use of young bulls in the United States (May 2014)
item A genome-wide association study of calf birth weight in Holstein cattle using single nucleotide polymorphisms and phenotypes predicted from auxiliary traits (May 2014)
item Genomic selection for producer-recorded health event data in US dairy cattle (May 2014)
item Application of the a posteriori granddaughter design to the Holstein genome (Apr 2014)
item Genetic evaluation of stillbirth in US Brown Swiss and Jersey cattle (Apr 2014)
item Accuracy of genomic predictions in Bos indicus (Nellore) cattle (Feb 2014)
item The challenges and importance of structural variation detection in livestock (Feb 2014)
item Increasing long-term response by selecting for favorable minor alleles (Feb 2014)
item µ-Calpain, calpastatin, and growth hormone receptor genetic effects on preweaning performance, carcass quality traits, and residual variance of tenderness in Angus cattle selected to increase minor haplotype ... frequencies (Feb 2014)
item The use of population-scale sequencing to identify CNVs impacting productive traits in different cattle breeds (Jan 2014)
item Candidate causative mutation on BTA18 associated with calving and conformation traits in Holstein bulls (Jan 2014)
item Mating programs including genomic relationships and dominance effects (Dec 2013)
item Effects of TMEM154 haplotypes 1 and 3 on susceptibility to ovine progressive pneumonia virus following natural exposure in sheep (Nov 2013)
item Modulation of the intestinal environment, innate immune response, and barrier function by dietary threonine and purified fiber during a coccidiosis challenge in broiler chicks (Nov 2013)
item Different susceptibilities of Eimeria acervulina, Eimeria maxima, and Eimeria tenella oocysts to dessication (Oct 2013)
item Increased efficacy of Eimeria oocysts delivery by gel beads or spray vaccination (Sep 2013)
item Increasing long term response by selecting for favorable minor alleles (Sep 2013)
item Measuring genomic pre-selection in theory and in practice (Sep 2013)
item Random forests approach for identifying additive and epistatic single nucleotide polymorphisms associated with residual feed intake in dairy cattle (Aug 2013)
item Application of a posteriori granddaughter and modified granddaughter designs to determine Holstein haplotype effects (Aug 2013)
item Single nucleotide polymorphisms in candidate genes associated with fertilizing ability of sperm and subsequent embryonic development in cattle (Jul 2013)
item Genome-wide association mapping for identification of quantitative trait loci for rectal temperature during heat stress in Holstein cattle (Jul 2013)
item Application of a posteriori granddaughter and modified granddaughter designs to determine Holstein haplotype effects (Jul 2013)
item Analysis of health trait data from on-farm computer systems in the U.S. I: Pedigree and genomic variance components estimation (Jul 2013)
item Heritability estimates of performance and health traits of Holstein calves (Jul 2013)
item Breeding for polled dairy cows versus dehorning: Preliminary cost assessments & discussion (Jul 2013)
item Using 90,113 single nucleotide polymorphisms in genomic evaluation of dairy cattle (Jul 2013)
item Dissection of genomic correlation matrices using multivariate factor analysis in dairy and dual-purpose cattle breeds (Jul 2013)
item Genomic evaluation and identification of haplotype affecting fertility for Ayrshire dairy cattle (Jul 2013)
item Tools to exploit sequence data to find new markers and disease loci in dairy cattle (Jul 2013)
item Mating programs including genomic relationships (Jul 2013)
item Trends in noncompliance with milk quality standards for Dairy Herd Improvement herds in the United States (Jul 2013)
item Optimal age at first calving for U.S. dairy cattle (Jul 2013)
item Regression metamodels of an optimal genomic testing strategy in dairy cattle when selection intensity is low (Jul 2013)
item Analysis of health trait data from on-farm computer systems in the U.S. II: Comparison of genomic analyses including two-stage and single-step methods (Jul 2013)
item We are making inroads on health and fitness traits (Jul 2013)
item Discovery of single nucleotide polymorphisms in candidate genes associated with fertility and production traits in Holstein cattle (Jun 2013)
item The use of dual-energy X-ray absorptiometry (DEXA) to assess the impact of Eimeria infections in broiler chicks (Jun 2013)
item Genomic evaluation of health traits in dairy cattle (May 2013)
item Standardization of health data – ICAR guidelines including health key (May 2013)
item Challenges and opportunities for farmer-recorded data in health and welfare selection (May 2013)
item Mating programs including genomic relationships and dominance effects (Apr 2013)
item Open source tools to exploit DNA sequence data from livestock species (Apr 2013)
item Changes in expression of CWC15 during preimplantation development in the bovine embryo (Apr 2013)
item Estimation of genetic marker effects for CAPN1, CAST, and GHR on carcass quality traits in Angus cattle selected to increase minor marker frequencies (Mar 2013)
item Development and applications of low-cost, high-throughput genotyping (Mar 2013)
item Systems Biology in Animal Breeding: Identifying relationships among markers, genes, and phenotypes (Feb 2013)
item Low density marker assays (LDMA) for high throughput, highly multiplexed detection, CNV, methylation, and expression assays (Jan 2013)
item Low-cost genotyping by next generation sequencing: Next generation genotyping (Jan 2013)
item Development of low-cost, high-throughput genotyping to complement SNP discovery by individual animal whole-genome sequencing (Jan 2013)
item Molecular characterization and immunological roles of avian IL-22 and its soluble receptor IL-22 binding protein (Sep 2012)
item Expression of nutrient transporters in duodenum, jejunum and ileum of Eimeria maxima- infected broiler chickens (Oct 2004)
Last Modified: 9/20/2013
Footer Content Back to Top of Page