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United States Department of Agriculture

Agricultural Research Service

Characterization/Evaluation/Utilization
item Optimizing depuration of salmon in RAS (Sep 2014)
item Accuracy of genomic selection for BCWD resistance in rainbow trout (Aug 2014)
item The development and characterization of a 57K SNP Chip for rainbow trout (Aug 2014)
item Increased susceptibility to infectious salmon anemia virus (ISAv) in Lepeophtheirus salmonis – infected Atlantic salmon (Aug 2014)
item Effects of phytoestrogens on expression of genes regulating growth-related processes in rainbow trout (Aug 2014)
item Growth performance, fillet quality, and reproductive maturity of rainbow trout (Oncorhynchus mykiss) cultured to 5 kilograms within freshwater recirculating systems (Jun 2014)
item Progress of the rainbow trout reference genome assembly project (Jun 2014)
item Growth performance comparison of intercross-triploid, induced triploid, and diploid rainbow trout (Jun 2014)
item Intravitreal injection of a chimeric phage endolysin Ply187 protects mice from Staphylococcus aureus endophthalmitis (Jun 2014)
item Detection of QTL in rainbow trout affecting survival when challenged with Flavobacterium psychrophilum (Jun 2014)
item In vitro and in vivo effects of phytoestrogens on protein turnover in rainbow trout (Oncorhynchus mykiss) white muscle (May 2014)
item Validation of linked QTL for bacterial cold water disease resistance and spleen size on rainbow trout chromosome Omy19 (May 2014)
item An investigation of the structure and function of antistaphylococcal endolysins using kinetic methods (May 2014)
item A resource of single-nucleotide polymorphisms for rainbow trout generated by restriction-site associated DNA sequencing of doubled haploids (May 2014)
item Freezing and thawing or freezing, thawing, and aging effects on beef tenderness (May 2014)
item Evaluation of Columbia, USMARC-Composite, Suffolk, and Texel rams as terminal sires in an extensive rangeland production system: VIII. Quality measures of lamb longissimus dorsi (Apr 2014)
item Evaluation of Columbia, USMARC-Composite, Suffolk and Texel rams as terminal sires in an extensive rangeland production system: VII. Accuracy of ultrasound predictors and their association with carcass weight, yield and value (Apr 2014)
item Mapping and expression of candidate genes for development rate in rainbow trout (Oncorhynchus mykiss) (Apr 2014)
item Fluidization velocity assessment of commercially available sulfur particles for use in autotrophic denitrification biofilters (Apr 2014)
item Evaluation of Columbia, USMARC-Composite, Suffolk, and Texel rams as terminal sires in an extensive rangeland production system: VI.Measurements of live-lamb and carcass shape and their relationship to carcass yield and value (Mar 2014)
item Selenium biofortification in North America: Using naturally selenium-rich feeds for livestock (Mar 2014)
item Comparing the effects of high vs. low nitrate on the health, performance, and welfare of juvenile rainbow trout Oncorhynchus mykiss within water recirculating aquaculture systems (Mar 2014)
item RNA-seq analysis of early hepatic response to handling and confinement stress in rainbow trout (Feb 2014)
item Evaluation of depuration procedures to mitigate off-flavor from harvest size Atlantic Salmon Salmo Salar cultured in a land-based recirculating aquaculture system (Feb 2014)
item Comparative effects of constant versus fluctuating thermal regimens on yellow perch growth, feed conversion and survival (Feb 2014)
item Influence of mineral supplementation on growth in yellow perch Perca flavescens fed a soy-based diet (Feb 2014)
item Identification of gender in yellow perch Perca flavescens using external morphology (Feb 2014)
item Use of RADs to identify canidate genes for response to crowding stress in rainbow trout (Feb 2014)
item Ploidy effects on genes regulating growth mechanisms during fasting and refeeding in juvenile rainbow trout (Oncorhynchus mykiss) (Jan 2014)
item Targeted approach to identify genetic loci associated with evolved dioxin tolerance in Atlantic Killifish (Fundulus heteroclitus) (Jan 2014)
item Identification of positional candidate genes for response to crowding stress in rainbow trout (Jan 2014)
item Gene expression dynamics during embryonic development in rainbow trout (Jan 2014)
item Validation of linkage between BCWD resistance and spleen size QTL on Omy19 in rainbow trout: Pleiotropy versus linkage (Jan 2014)
item Characterization of rainbow trout (Oncorhynchus mykiss) spleen transcriptome and identification of immune-related genes (Jan 2014)
item Transcriptome assembly and digital gene expression atlas of the rainbow trout (Jan 2014)
item Effects of feeding level and sexual maturation on fatty acid composition of energy stores in diploid and triploid rainbow trout (Oncorhynchus mykiss) (Jan 2014)
item Current and future assisted reproductive technologies for fish species (Nov 2013)
item Determination of off-flavor compounds, 2-methylisoborneol and geosmin, in salmon fillets using stir bar sorptive extraction–thermal desorption coupled with gas chromatography–mass spectrometry (Oct 2013)
item Effect of sexual maturation on muscle gene expression of rainbow trout: RNA-Seq approach (Oct 2013)
item Genotype-by-environment interaction of growth traits in rainbow trout (Oncorhynchus mykiss): A continental scale study (Oct 2013)
item Effect of dietary lysine on hepatic lysine catabolism in broilers (Sep 2013)
item Cloning and characterization of a novel oocyte-specific gene encoding an F-Box protein in rainbow trout (Oncorhynchus mykiss) (Sep 2013)
item Physicochemical characterization of Staphylococcus aureus-lysing LysK enzyme in complexes with polycationic (Sep 2013)
item Quantitative trait loci affecting response to crowding stress in an F2 generation of rainbow trout produced through phenotypic selection (Sep 2013)
item Accurate detection and quantification of the fish viral hemorrhagic septicemia virus (VHSv) with a two-color fluorometric real-time PCR assay (Aug 2013)
item Phenotypic and genetic variation in two North American arctic charr (Salvelinus alpinus) stocks cultured in recirculating aquaculture systems (Aug 2013)
item Characterization and expression analysis of genes involved in SUMOylation during embryogenesis in rainbow trout (Oncorhynchus mykiss) (Jul 2013)
item Safety and efficacy of low-dose, subacute exposure of mature ewes to sodium chlorate (Jul 2013)
item Comparison of disease resistance between diploid, induced-triploid, and intercross-triploid rainbow trout including trout selected for resistance to Flavobacterium psychrophilum (Jun 2013)
item Feeding low-phytic acid corn grain to finishing wethers does not alter phosphorus digestion (Jun 2013)
item Influence of mitochondrial efficiency on beef lean color stability (Jun 2013)
item Effect of degree of dark cutting on tenderness and flavor attributes of beef (Jun 2013)
item Genome-wide genetic diversity and differentially selected regions among Suffolk, Rambouillet, Columbia, Polypay and Targhee sheep (Jun 2013)
item Genetic evaluation of the probability of lambing in yearling Targhee ewes (Jun 2013)
item Maternal nutritional plane and selenium supply during gestation impacts visceral organ mass and intestinal growth and vascularity of neonatal lamb offspring (Jun 2013)
item Undetectable bacterial resistance to phage lytic proteins from the Staphylococcus aureus bacteriophage vB_SauS-phiIPLA88 (May 2013)
item Effects of triploidy on growth and protein degradation during the recovery from feed deprivation in rainbow trout (Oncorhynchus mykiss) (May 2013)
item Identification of gender in yellow perch by external morphology: validation in four geographic strains and effects of estradiol (May 2013)
item Metabolic and hormonal responses of growing modern meat type chickens to fasting (May 2013)
item Design, dimensioning, and performance of a research facility for studies on the requirements of fish in RAS environments (May 2013)
item Evaluation of a canola protein concentrate as a replacement for fishmeal in a commercial production diet for Atlantic salmon (Apr 2013)
item A deleterious effect associated with UNH159 is attenuated in twin embryos of an inbred line of tilapia (Oreochromis aureus) (Apr 2013)
item A new StaRT-PCR approach to detect and quantify fish viral hemorrhagic septicemia virus (VHSv): enhanced quality control with internal standards (Apr 2013)
item Variation in temperature tolerance among families of Atlantic salmon (Salmo salar L.) is associated with hypoxia tolerance, ventricle size and myoglobin level (Mar 2013)
item Growth performance comparison of intercross-triploid, induced-triploid, and diploid female rainbow trout Oncorhynchus mykiss (Feb 2013)
item Effects of phytoestrogens on indices of protein turnover in rainbow trout (Oncorhynchus mykiss) primary myocytes (Feb 2013)
item Mapping of QTL for bacterial cold water disease resistance in rainbow trout (Feb 2013)
item Identifying genes affectng stress response in rainbow trout (Feb 2013)
item Effect of sexual maturation on muscle gene expression of rainbow trout on a high nutritional plane: RNA-Seq approach (Feb 2013)
item Impact of depuration of earth-musty off-flavors on fillet quality of atlantic salmon, Salmo salar, cultured in a recirculating aquaculture system (Feb 2013)
item Evaluation of the prebiotic, previda, on performance characteristics, intestinal microbial community, immune function and intestinal tract morphology of atlantic salmon (Salmo salar) (Feb 2013)
item Bacteriophage-encoded lytic enzymes control growth of contaminating Lactobacillus found in fuel ethanol fermentations (Feb 2013)
item Comparing the effects of feeding a grain- or a fish meal-based diet on water quality, waste production, and rainbow trout Oncorhynchus mykiss performance within low exchange water recirculating aquaculture systems (Jan 2013)
item Identification and characterization of long non-coding RNAs in rainbow trout eggs (Jan 2013)
item Single nucleotide polymorphism (SNP) discovery in rainbow trout using restriction site associated DNA (RAD) sequencing of doubled haploids and assessment of polymorphism in a population survey (Jan 2013)
item RNA-seq analysis of stress response in rainbow trout (Jan 2013)
item Molecular and physiological responses to long-term sublethal ammonia exposure in Atlantic salmon (Salmo salar) (Nov 2012)
item QTL affecting stress response to crowding in a rainbow trout broodstock population (Nov 2012)
item Effect of sexual maturation and polyploidy on chemical composition and fatty acid content of energy stores in female rainbow trout, Oncorhynchus mykiss (Aug 2012)
item Molecular characterization and expression analysis of Zar1 and Zar1-like genes in rainbow trout (Aug 2012)
item Importin alpha8 (KPNA7) interacts with STL3, an oocyte-specific protein in rainbow trout (Oncorhynchus mykiss) (Aug 2012)
item Pathogenic infection confounds induction of the estrogenic biomarker vitellogenin in rainbow trout (Jul 2012)
item Effects of phytoestrogens on protein turnover in rainbow trout primary myocytes (Jul 2012)
item Effects of dietary estrogen treatment on growth and feed intake in yellow perch (Perca flavescens) (Jul 2012)
item Genetic parameter estimates for feed intake, body composition, and fillet quality traits in a rainbow trout population selected for improved growth (Jun 2012)
item Analysis of differential gene expression in response to handling and confinement stress in rainbow trout using whole transcriptome RNA-seq (Jun 2012)
item Mapping of QTL for bacterial cold water disease resistance in rainbow trout (Jun 2012)
item Characterization of the rainbow trout oocyte microRNA transcriptome (Jun 2012)
item Performance testing and selection for commercially important traits in North American atlantic salmon (Jun 2012)
item Quantitative trait loci analyses and RNA-seq identify genes affecting stress response in rainbow trout (Jun 2012)
item Use of RADs and doubled haploids to identify SNPs in rainbow trout (Jun 2012)
item Characterization and evaluation of sex-specific expression of suppressors of cytokine signaling (SOCS) -1 and -3 in juvenile yellow perch (Perca flavescens) treated with lipopolysaccharide (May 2012)
item Evaluation of the prebiotic, Previda, on performance characteristics, intestinal microbial community, immune function and intestinal tract morphology of Altantic salmon (Salmo salar) (May 2012)
item Factors affecting the first cleavage interval and effects of parental generation on tetraploid production in rainbow trout (Oncorhynchus mykiss) (May 2012)
item Influence of long term ammonia exposure on Atlantic salmon (Salmo salar L.) parr growth and welfare (May 2012)
item Rna-Seq Identifies Snp Markers for Growth Traits in Rainbow Trout (May 2012)
item Impact of carbon dioxide level, water velocity, strain, and feeding regimen on growth and fillet attributes of cultured rainbow trout (Oncorhynchus mykiss) (Apr 2012)
item Effect of genetics and feeding strategies on growth of rainbow trout (Apr 2012)
item A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of synteny with model fish genomes (Mar 2012)
item Impact of depuration of earthy-musty off-flavors on fillet quality of Atlantic salmon, Salmo salar, cultured in a recirculating system (Mar 2012)
item Molecular crosstalk between a chemical and a biological stressor and consequences on disease manifestation in rainbow trout (Mar 2012)
item Evaluation of Arctic charr Salvelinus alpinus performance fed fishmeal free diets and two commercial diets in a recirculating system (Feb 2012)
item Effects of maturation, diet, and estradiol on indices of protein degradation in rainbow trout (Oncorhychus mykiss) (Feb 2012)
item Evaluation of family growth responses in Atlantic salmon (Salmo salar)fed two fishmeal free diets and a fishmeal reference diet (Feb 2012)
item Effects of plant protein blends on growth performance of rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar) (Feb 2012)
item Effects of feeding level and sexual maturation on carcass and fillet characteristics and indices of protein degradation in rainbow trout (Oncorhynchus mykiss) (Feb 2012)
item Toll-like receptors in bony fish: from genomics to function (Jan 2012)
item Identification and expression of Smads associated with TGF-beta/activin/nodal signaling pathways in the rainbow trout (Oncorhynuchus mykiss) (Jan 2012)
item Effect of sexual maturation on thermal stability, viscoelastic properties, and texture of rainbow trout, Oncorhynchus mykiss, fillets (Jan 2012)
item New in-depth rainbow trout transcriptome reference and digital atlas of gene expression (Jan 2012)
item Identification of differentially expressed miRNAs potentially associated with egg quality in rainbow trout (Oncorhynchus mykiss) (Jan 2012)
item Mapping of QTL for bacterial cold water disease resistance in rainbow trout (Jan 2012)
item Next-generation sequencing reveals a conserved haplotype controlling parallel adaptation in geographically distant rainbow trout (Oncorhynchus mykiss) populations (Jan 2012)
item Effects of plant protein blends on growth performance of rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar) (Jan 2012)
item Low-dose hydrogen peroxide application in closed recirculating aquaculture systems (Jan 2012)
item Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors (Dec 2011)
item Abnormal swimming behavior and increased deformities in rainbow trout Oncorhynchus mykiss cultured in low exchange water recirculation aquaculture systems (Nov 2011)
item Effects of sex steroids on indices of protein turnover in rainbow trout (Oncorhynchus mykiss) white muscle (Nov 2011)
item A microsatellite linkage map of striped bass (Morone saxatilis) reveals conserved synteny with the hree-spined stickleback (Gasterosteus aculeatus) (Oct 2011)
item Importin a8 (KPNA7) interacts with STL3, an oocyte-specific protein in rainbow trout (Oncorhynchus mykiss) (Aug 2011)
item Use of technologies to control reproduction in finfish aquaculture (Aug 2011)
item Proteolytic response to feeding level in rainbow trout (Oncorhynchus mykiss) (Jul 2011)
item Analysis of BAC-end sequences in rainbow trout: content characterization and assessment of synteny between trout and other fish genomes (Jun 2011)
item Assessing the suitability of a partial water reuse system for rearing juvenile Chinook salmon Oncorhynchus tshawytscha for stocking in Washington State (Jun 2011)
item Association between IL-10a SNPs and resistance to cyprinid herpesvirus-3 infection in common carp (Cyprinus carpio) (May 2011)
item Off-flavor characterization and depuration in Atlantic salmon cultured to food-size within closed-containment systems (May 2011)
item The effects of ozone and water exchange rates on water quality and rainbow trout Oncorhynchus mykiss performance in replicated water recirculating systems (May 2011)
item The effects of ozonation on performance, health and welfare of rainbow trout Oncorhynchus mykiss in low-exchange water recirculation aquaculture systems (May 2011)
item Effect of sexual maturation on growth, fillet composition, and texture of female rainbow trout (Oncorhynchus mykiss) on a high nutritional plane (Apr 2011)
item Effect of dietary vitamin E supplementation and refrigerated storage on quality of rainbow trout fillets (Apr 2011)
item A first generation integrated map of the rainbow trout genome (Apr 2011)
item Rapid and accurate sequencing of the rainbow trout physical map using Illumina technology (Mar 2011)
item Apparent digestibility of possible fish meal replacements in Atlantic Salmon, Salmo salar and Arctic Charr, Salvelinus alpinus (Mar 2011)
item Effect of sexual maturation and polyploidy on chemical composition and fatty acid content of energy stores in female rainbow trout (Oncorhynchus mykiss) (Mar 2011)
item The effect of feeding level on growth performance and indices of protein degradation in rainbow trout (Oncorhychus mykiss) (Mar 2011)
item Effects of plant protein blends on growth performance of rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar) (Mar 2011)
item Candidate gene markers for selective breeding of CyHV-3-resistant common carp (Mar 2011)
item Towards molecular biomarkers for muscle atrophy and fillet quality in rainbow trout (Feb 2011)
item Tetraploid production in salmonids (Feb 2011)
item Genomic analysis of the stress response of rainbow trout (Feb 2011)
item Detection of quantitative trait loci (QTL) for resistance to bacterial cold water disease and spleen size in rainbow trout (Feb 2011)
item Detection of quantitative trait loci affecting response to crowding stress in rainbow trout (Feb 2011)
item SNP analysis with duplicated fish genomes: differentiation of SNPs, paralogous sequence variants and multi-site variants (Jan 2011)
item Molecular characterization of the Akt-TOR signaling pathway in rainbow trout: potential role in muscle growth/degradation (Jan 2011)
item Isolation of innate immune response genes, expression analysis, polymorphism identification and development of genetic marker for linkage analysis in common carp (Cyprinus carpio) (Jan 2011)
item Detection of QTL for spleen size and disease resistance in rainbow trout (Jan 2011)
item Rapid and accurate sequencing of the rainbow trout physical map using Illumina technology (Jan 2011)
item Genomic analysis of the rainbow trout response to crowding (Jan 2011)
item Unlocking genetic secrets of the fast/slow growth in rainbow trout with next-generation sequencing (Jan 2011)
item A microsatellite linkage map of striped bass (Morone saxatilis) (Jan 2011)
item MicroRNA transcriptome profile of rainbow trout (Oncorhynchus mykiss) egg (Jan 2011)
item Molecular cloning, characterization and expression analysis of TLR9, MyD88 and TRAF6 genes in common carp (Cyprinus carpio) (Jan 2011)
item Evidence of major genes affecting resistance to bacterial cold water disease in rainbow trout using Bayesian methods of segregation analysis (Dec 2010)
item Status of the rainbow trout genome reference sequence assembly (Nov 2010)
item Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches (Oct 2010)
item Relating instrumental texture, determined relating instrumental texture, determined attachments, to sensory analysis of rainbow trout, Oncorhynchus mykiss, fillets (Sep 2010)
item Weight loss and fillet quality characteristics of Atlantic salmon (Salmo salar) after purging for 5, 10, 15 or 20 days (Aug 2010)
item Design and performance of recirculating systems for Atlantic salmon (Salmo salar) at the USDA ARS National Cold Water Marine Aquaculture Center (Franklin, Maine) (Aug 2010)
item Genetic improvement of rainbow trout at the National Center for Cool and Cold Water Aquaculture (Aug 2010)
item Genetic management of broodstock populations with DNA markers in rainbow trout (Aug 2010)
item Genetic management of broodstock populations with DNA markers in rainbow trout (Aug 2010)
item Fbos, a novel oocyte-specific protein, interacts with proteins important for oocyte development in rainbow trout (Oncorhynchus mykiss) (Jul 2010)
item ADP-ribosylation factor-like protein 4C (ARL4C) interacts with galectin-3 during oocyte development and embryogenesis in rainbow trout (Oncorhynchus mykiss) (Jul 2010)
item Genomic analysis of the stress response of rainbow trout to crowding (Jul 2010)
item Molecular characterization of atrogin-1/F-box protein-32 (FBXO32) and F-box protein 25 (FBXO25) in rainbow trout (Oncorhynchus mykiss); expression across tissues in response to feed deprivation (Jul 2010)
item Validating selective breeding approaches for disease resistance (Jul 2010)
item A prospective matched nested case-control study of bacterial gill disease outbreaks in Ontario, Canada government salmonid hatcheries (Jun 2010)
item SNP discovery and development of genetic markers for mapping immune response genes in common carp (Cyprinus carpio) (Jun 2010)
item The effects of carbon dioxide on performance and histopathology of rainbow trout Oncorhynchus mykiss in water recirculation aquaculture systems (Mar 2010)
item Single nucleotide polymorphism discovery in rainbow trout (Mar 2010)
item The effects of aquaculture production noise on the growth, condition factor, feed conversion, and survival of rainbow trout, Oncorhynchus mykiss (Mar 2009)
item US researchers study effectiveness of Fluidized Sand Biofilters (Mar 2008)
Last Modified: 9/20/2013
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