Skip to main content
ARS Home » Research » Manuscripts by Strategic Topical Areas
Germplasm Enhancement & Plant Breeding
item Registration of ‘CP 15-1407’ sugarcane for muck soils (Apr 2024)
item Genetic Determinants of Weed Control in Rice (Oryza sativa L.) using allelopathy approach (Mar 2024)
item Experimental sugar beet cultivars evaluated for rhizomania resistance and storability in Idaho, 2022 (Mar 2024)
item Kimberly sugar beet germplasm evaluated for Rhizoctonia crown and root rot resistance in Idaho, 2023 (Mar 2024)
item Foliar and seed treatment insecticides for the control of beet curly top in Idaho sugar beet, 2023 (Mar 2024)
item Commercial sugar beet cultivars evaluated for rhizomania resistance and storability in Idaho, 2022 (Mar 2024)
item Evaluation of sugar beet breeding lines for resistance to Rhizoctonia crown and root rot, 2023 (Mar 2024)
item The Hessian fly resistance gene HvRHF1 is localized in an NBS-LRR gene cluster in barley (Mar 2024)
item Molecular mechanisms of the stripe rust interaction with resistant and susceptible wheat genotypes (Mar 2024)
item Complete genome sequence of alfalfa-associated picorna-like virus 2 (Mar 2024)
item Caneberry breeding program synopsis for Breeding Insight website (Feb 2024)
item Soybean test weight in relation to genotype, environment, and genotype x environment interaction in the Southern United States (Feb 2024)
item Differential regulation of miRNAs involved in the susceptible and resistance responses of wheat cultivars to wheat streak mosaic virus and Triticum mosaic virus (Feb 2024)
item Evaluation of lettuce germplasm for resistance to Impatiens necrotic spot virus (Feb 2024)
item Regulatory frameworks involved in the floral induction, formation and developmental programming of woody horticultural plants: a case study on blueberries (Feb 2024)
item Draft genome sequence data of Nothopassalora personata, peanut foliar pathogen from Argentina (Feb 2024)
item Curly top viruses and phytoplasmas in sugar beets, common beans, and beet leafhoppers along with vector population dynamics in southern Idaho (Jan 2024)
item Transcriptomic and metabolomic changes in postharvest sugarbeet roots reveal widespread metabolic changes in storage and identify genes potentially responsible for respiratory sucrose loss (Jan 2024)
item Genome-wide identification and characterization of greenbug-inducible NAC transcription factors in sorghum (Jan 2024)
item Proanthocyanidins: Key for resistance to Globisporangium (formerly Pythium) seed rot of pea (Jan 2024)
item Modulatory role of nitric oxide in wound healing of potato tubers (Jan 2024)
item Development and validation of a mid-density DArTag-based genotyping platform for lettuce (Lactuca sativa) (Jan 2024)
item Development of epigenetic landscape and gene expression atlas of oats (Jan 2024)
item Exploratory genomic sequence analysis reveals structural differences at key loci for growth habit, seed dormancy, and rust resistance in barley (Jan 2024)
item Towards improving oil composition and content in oat through metabolic engineering (Jan 2024)
item Genetic mapping of resistance QTLs to bacterial leaf streak in wheat (Jan 2024)
item Identification of QTLs associated with yield components, agronomic traits, and kernel parameters in hard red spring wheat (Jan 2024)
item Telomere-to-telomere genome assembly and resequencing of 20 Aegilops umbellulata genomes reveals broad genetic and phenotypic diversity for novel disease resistance traits (Jan 2024)
item Molecular cloning of the septoria nodorum blotch susceptibility gene Snn2 in wheat (Jan 2024)
item Molecular mapping of a novel genetic locus governing enhanced susceptibility to tan spot in durum wheat (Jan 2024)
item Genome-wide association study unravel the genetic basis of seedling heat stress tolerance in wheat (Triticum aestivum L.) (Jan 2024)
item Natural and artificial selection of multiple alleles revealed through genomic analyses (Jan 2024)
item Solution properties of laccase-treated pectic polysaccharides derived from steam-dried sugar beet pulp (Dec 2023)
item From a point to a range of optimum estimates for maize plant density and nitrogen rate recommendations (Dec 2023)
item Phenotypic characterization, plant growth and development, genome methylation, and mineral elements composition of neotetraploid lettuce (Lactuca sativa L.) (Dec 2023)
item The complete and gapless genome of the sugarbeet pathogen Cercospora beticola (Dec 2023)
item Genome-wide association analysis of plant architecture traits using doubled haploid lines derived from different cycles of the Iowa Stiff Stalk Synthetic maize population (Dec 2023)
item Multifunctionality of AsCFEM6 and AsCFEM12 effectors from the potato early blight pathogen Alternaria solani (Dec 2023)
item HC-Pro cistron of Triticum mosaic virus is dispensable for systemic infection in wheat but is required for symptom phenotype and efficient genome amplification (Dec 2023)
item Alfalfa vein mottling virus, a novel potyvirid infecting Medicago sativa L (Nov 2023)
item Introduction of plant transposon annotation for beginners (Nov 2023)
item Cataloging SCN resistance loci in north american public soybean breeding programs (Nov 2023)
item Breeding lettuce for resistance against Sclerotina minor (Nov 2023)
item Exploring 65 years of progress in cotton nutrient uptake, efficiency and partitioning in the USA (Nov 2023)
item Genome-wide informative microsatellite markers and population structure of Fusarium virguliforme from Argentina and the USA (Nov 2023)
item Development of high-yielding upland cotton genotypes with reduced regrowth after defoliation using a combination of molecular and conventional approaches (Nov 2023)
item A medium-density genotyping platform for cultivated strawberry using DArTag technology (Nov 2023)
item Digestibility of corn distiller’s dried grains with solubles in practical feeds with phytase and xylanase treatment fed to Nile tilapia (Nov 2023)
item Effects of dietary arachidonic acid supplementation in low fishmeal and fish oil-free diets on growth performance, inflammatory response, gut histology, and non-specific immunity in sub-adult rainbow trout, Oncorhynchus mykis (Oct 2023)
item Apple CRISPR-Cas9 – a recipe for successful targeting of AGAMOUS genes in domestic apple (Oct 2023)
item Phytochemical and agronomic characterization of high-flavonoid lettuce lines grown under field conditions (Oct 2023)
item Genetic architecture of salt tolerance in cowpea (Vigna unguiculata (L.) Walp.) at seedling stage using a whole genome resequencing approach (Oct 2023)
item Genomic variations explorer (GenVarX): a toolset for annotating promoter and CNV regions using genotypic and phenotypic differences (Oct 2023)
item Combined omics approaches reveal distinct mechanisms of resistance and/or susceptibility in sugar beet double haploid genotypes at early stages of beet curly top virus infection (Oct 2023)
item Texture properties, crude fat, fatty acid profiles, total soluble solids, and total polyphenols for 21 pecan varieties and the effects of harvest year (Oct 2023)
item Controlling eutrophication of aquaculture production water using biochar: correlation of molecular composition with adsorption characteristics as revealed by FT-ICR mass spectrometry (Sep 2023)
item Improved fecal particle size profile in rainbow trout fed feeds containing different ratios of animal meal and plant protein concentrates: Effect on nitrogen and phosphorus partitioning (Sep 2023)
item Population and genome-wide association studies of Sclerotinia sclerotiorum isolates collected from diverse host plants throughout the United States (Sep 2023)
item Quantitative trait locus analysis of Hessian fly resistance in soft red winter wheat (Sep 2023)
item Alterations in growth habit to channel end-of-season perennial reserves towards increased yield and reduced regrowth after defoliation in upland cotton (Gossypium hirsutum L.) (Sep 2023)
item Identification of Soybean Germplasm and Associated Molecular Markers with Resistance to Fusarium graminearum (Sep 2023)
item Agronomic evaluation and molecular cytogenetic characterization of Triticum aestivum x Thinopyrum spp. derivative breeding lines presenting perennial growth habit (Sep 2023)
item A new beginning Producing Diploid Potato Seed (Sep 2023)
item Composition of the alfalfa pathobiome in commercial fields (Aug 2023)
item Fungicide sensitivity of sclerotinia sclerotiorum from U.S. soybean and dry bean, compared to different regions and climates (Aug 2023)
item A new and effective method to induce infection of Phyllachora maydis into corn for tar spot studies in controlled environments (Aug 2023)
item Changes in the diversity of pecan (Carya illinoinensis) rhizosphere microbial community with different nitrogen fertilization, a case study in Oklahoma pecan orchard (Jul 2023)
item A genome-wide association study reveals region associated with seed protein content in cowpea (Jul 2023)
item Bioinformatic analysis of yeast two-hybrid next-generation interaction screen data (Jul 2023)
item Next-generation yeast two-hybrid screening to discover protein-protein interactions (Jul 2023)
item From endodormancy to ecodormancy: the transcriptional landscape of apple floral buds (Jul 2023)
item Mining for a new class of fungal natural products: The evolution, diversity, and distribution of isocyanide synthase biosynthetic gene clusters (Jul 2023)
item Aneuploidy formation in the filamentous fungus Aspergillus flavus in response to azole stress (Jun 2023)
item QTL-seq analysis and linkage mapping reveal genomic regions contributing to the epicotyl length trait in adzuki bean (Vigna angularis) (Jun 2023)
item Genetic mechanisms of pigment accumulation in carrot colours (Jun 2023)
item The Fusarium graminearum transporters Abc1 and Abc6 are important for xenobiotic resistance, trichothecene accumulation, and virulence to wheat (Jun 2023)
item Evidence of a divided nutritive function in the rainbow trout (Oncorhynchus mykiss) midgut and hindgut microbiomes by whole shotgun metagenomic approach (Jun 2023)
item Pangenomics of the death cap mushroom Amanita phalloides, and of Agaricales, reveals dynamic evolution of toxin genes in an invasive range (May 2023)
item Impact of room temperature storage on the pecan kernel color, carotenoids, polyphenols, and physicochemical properties (May 2023)
item Characterization of the seed virome of alfalfa (Medicago sativa L) (May 2023)
item Long-term effects of rootstock and tree type on the economic profitability of ‘Gala’, ‘Fuji’ and ‘Honeycrisp’ orchards performance. (May 2023)
item LaeA-regulated fungal traits mediate bacterial community assembly (May 2023)
item Evaluation of a low-resource soy protein production method and its products (Apr 2023)
item New Releases from the Geneva® Apple Rootstock Breeding Program (Apr 2023)
item Engineered biomaterials for reducing phosphorus and nitrogen levels from downstream water of aquaculture facilities (Mar 2023)
item Chymotrypsin inhibitor assay: Expressing, calculating, and standardizing inhibitory activity in absolute amounts of chymotrypsin inhibited (Mar 2023)
item Medicago truncatula resources to study legume biology and symbiotic nitrogen fixation (Mar 2023)
item Snake River alfalfa virus, a persistent virus infecting alfalfa (Medicago sativa L.) in Washington State, USA (Feb 2023)
item Susceptibility of potato lenticels to infection by pathogens (Feb 2023)
item Genetics of biochemical attributes regulating morpho-physiology of upland cotton under high temperature conditions (Jan 2023)
item Lipo-Chitooligosaccharides induce specialized fungal metabolite profiles that modulate bacterial growth (Dec 2022)
item A new method for determining protein solubility index (PSI) based on extraction with 5 mM alkali hydroxide and its correlation with trypsin inhibitor activity in soybean products (Oct 2022)
item Evaluation of host-plant resistance and high residue rye for management of Meloidogyne incognita in cotton (Jul 2022)
item Development and characterization of 20 genomic SSR markers for ornamental cultivars of weigela (May 2022)
item Diversity of the virome associated with alfalfa (Medicago sativa L.) in the U.S. Pacific Northwest (May 2022)
item Sorghum as a potential valuable aquafeed ingredient: Nutritional quality and digestibility (May 2022)
item Developing an optimized method for measuring chymotrypsin inhibitor activity in protein products (May 2022)
item Improving and developing sustainable methods for plant protein processing (May 2022)
item Method development and optimization for measuring chymotrypsin and chymotrypsin inhibitor activities (May 2022)
item New and improved methods for measuring acid insoluble ash (Apr 2022)
item Multi-tissue RNAseq reveals genetic and temporal differences in acute viral (IHN) infection among three selected lines of rainbow trout with varying resistance (Apr 2022)
item Expanding the RNA virome of nematodes and other soil-inhabiting organisms (Mar 2022)
item Latitude oil as a sustainable alternative to dietary fish oil in rainbow trout (Oncorhynchus mykiss): Effects on filet fatty acid profiles, intestinal histology, and plasma biochemistry (Mar 2022)
item Simplified analysis and expanded profiles of avenanthramides in oat grains (Feb 2022)
item Different dietary combinations of high/low starch and fat with or without bile acid supplementation on growth, liver histopathology, gene expression and fatty acid composition of largemouth bass, Micropterus salmoides (Jan 2022)
item Evaluation of the ability of Pichia guilliermondii to improve growth performance and disease resistance in rainbow trout (Oncorhynchus mykiss) (Jan 2022)
item Targeted transcriptomics reveals signatures of large-scale independent origins and concerted regulation of effector genes in Radopholus similis (Nov 2021)
item Insect (black soldier fly larvae) oil as a potential substitute for fish or soy oil in the fish meal-based diet of juvenile rainbow trout (Oncorhynchus mykiss) (Oct 2021)
item Comparison of ISO 14902:2001 with AOCS Ba 12a-2020 for determining trypsin inhibitor activity in protein products (Sep 2021)
item Digesta and plasma metabolomics of rainbow trout strains with varied yolerance of plant-based diets highlights potential for non-lethal assessments of enteritis development (Sep 2021)
item Host-induced gene silencing of a Sclerotinia sclerotiorum oxaloacetate acetylhydrolase using bean pod mottle virus as a vehicle reduces disease on soybean (Jul 2021)
item Transcription factors in alfalfa (Medicago sativa L.): genome-wide identification and a web resource center AlfalfaTFDB (Jul 2021)
item Soybean trypsin inhibitor and urease activities and their correlations as affected by heating method, duration, sample matrix and prior soaking (Jul 2021)
item Insect meal inclusion as a novel feed ingredient in soya-based diets improves performances of rainbow trout (Oncorhynchus mykiss) (Jun 2021)
item Effects of elevated temperature and dietary additives Thermal Care™, Bio-Mos®, and GroBiotic® A on rainbow trout (Oncorhynchus mykiss) performance (Jun 2021)
item High moisture extrusion - a promising new method for making aquafeed with unique properties (Apr 2021)
item Trypsin inhibitor assay: expressing, calculating, and standardizing inhibitor activity in absolute amounts of trypsin inhibited or trypsin inhibitors (Apr 2021)
item An international collaborative study on trypsin inhibitor assay for legumes, cereals and related products (Mar 2021)
item Dietary amino acid supplementation affects temporal expression of amino acid transporters and metabolic genes in selected and commercial strains of rainbow trout (oncorhynchus mykiss) (Feb 2021)
item Distributions of nutrients and avenanthramides within oat grain and effects on pearled kernel composition (Jan 2021)
item Spontaneous and fungicide-induced genomic variation in Sclerotinia sclerotiorum (Jan 2021)
item Comparison of new and conventional processing methods for their effects on physical properties of fish feed (Jan 2021)
item The root lesion nematode effector Ppen10370 is essential for parasitism of Pratylenchus penetrans (Jan 2021)
item Insect (black soldier fly, Hermetia illucens) meal supplementation prevents the soybean meal-induced intestinal enteritis in rainbow trout and health benefits of using insect oil (Dec 2020)
item High-throughput sequencing for deciphering the virome of alfalfa (Medicago sativa L.) (Sep 2020)
item Identification of complete genome sequencing of alfalfa virus S diagnosed in alfalfa plants (Medicago sativa L.) from Washington State, USA (Jul 2020)
item Evaluation of graded levels of soy oil as a fish oil replacement in high soy protein feeds for juvenile red drum, Sciaenops ocellatus (Jun 2020)
item Identification of a novel isolate of Alfalfa virus S from China suggests a possible role of seed contamination in the distribution of the virus (Jun 2020)
item Prevalence of the root lesion nematode virus (RLNV1) in populations of Pratylenchus penetrans from North America (May 2020)
item Identification of emerging viral genomes in transcriptomic datasets of alfalfa (Medicago sativa L.) (Dec 2019)
item An expansin-like candidate effector protein from Pratylenchus penetrans modulates immune responses in Nicotiana benthamiana (Nov 2019)
item Identification of the coding-complete genome of Cycas necrotic stunt virus in transcriptomic data sets of alfalfa (Medicago sativa) (Sep 2019)