Location: Crop Genetics Research Unit
Title: QTL analysis of shoot ureide and nitrogen concentrations in soybean (Glycine max L. [Merr.]) Authors
Submitted to: Crop Science
Publication Type: Peer Reviewed Journal
Publication Acceptance Date: June 24, 2013
Publication Date: December 1, 2013
Citation: Hwang, S., King, C., Davies, M., Ray, J.D., Cregan, P.B., Purcell, L. 2013. QTL analysis of shoot ureide and nitrogen concentrations in soybean (Glycine max L. [Merr.]). Crop Science. 53:2421-2433. Interpretive Summary: Nitrogen fixation is the process by which certain types of plants obtain nitrogen from the atmosphere in a symbiotic relationship with bacteria. In soybean, this process is more sensitive to drought than photosynthesis. High concentrations of certain plant compounds are associated with sensitivity of nitrogen fixation to drought. Differences in these compounds were evaluated in a genetic population and then molecular markers used to identify the possible locations of genes involved in the differences. Over three years of evaluation of the population and using multiple methodologies, between two and five potential locations of genes were identified. Knowledge of these locations may be useful in selecting soybean lines with more drought tolerant nitrogen fixation.
Technical Abstract: Nitrogen fixation in soybean (Glycine max [L.] Merr.) is more sensitive to drought than photosynthesis, and high concentrations of shoot ureide and N are associated with sensitivity of N2 fixation to drought. Genotypic differences in ureide and N concentration were evaluated using a mapping population of KS4895 and Jackson with 97 RILs. For three irrigated environments, broad-sense heritability for ureide and N concentration was 0.73 and 0.60, respectively. Under irrigated conditions, five quantitative trait loci (QTLs) for ureide concentration were identified using composite interval mapping (CIM). Multiple interval mapping (MIM) identified two QTLs with locations similar to those identified with CIM. Four QTLs for N concentration were detected using CIM, and one QTL was identified with MIM with a similar position as that identified with CIM. A QTL on Gm13 for shoot ureide and N appeared to be pleiotropic. In the drought environment, two QTLs were identified using CIM for both shoot ureide and N; a QTL for ureide concentration on Gm19 mapped to the same position as a ureide QTL under irrigated conditions but the additive effect was opposite in sign. A search for metabolic genes in QTL regions predicted for the pleiotropic effect of N and ureide (Gm13, carbonic anhydrase) and for ureide (Gm19, inosine-uridine nucleoside hydrolase). These QTLs may be useful in selecting lines drought tolerant for N2 fixation.