Technical Abstract: Diaphorina citri, the Asian citrus psyllid,(Hemiptera) is the insect vector of Candidatus Liberibacter asiaticus, the presumed cause of citrus greening disease, known as huanglongbing. Sequencing of the Diaphorina citri metagenome has been initiated to gain better understanding of the biology of D. citri, and the potential roles of its bacterial endosymbionts. Endosymbionts previously identified by ribosomal DNA amplification were validated, raw reads from the D. citri metagenome sequence were mapped to reference genome sequences in the national repository. Results of the mapping identified Wolbachia Diaphorina, and an enteric bacterium most similar to Salmonella. Wolbachia-derived reads were extracted using the complete genome sequences of four Wolbachia strains, assembled into a draft genome sequence, and the annotation assessed for the presence of features potentially involved in host interaction. Genome alignment with the complete sequences reveals membership of Wolbachia wDi in supergroup B, further supported by phylogenetic analysis of GatB and FtsZ. Phylogenies built using FtsZ and Wsp genes indicate that the Wolbachia strain in the Florida D. citri fall into the sub-clade of supergroup B, which is distinct from Wolbachia Diaphorina present in Chinese D. citri populations, supporting the hypothesis that the D. citri introduced into Florida did not originate from China, and were more closely related to the populations in middle eastern countries. Thus future efforts to identify biological control agents against this psyllid should concentrate their efforts within the Middle East.