Crops Pathology and Genetics Research Site Logo
ARS Home About Us Helptop nav spacerContact Us En Espanoltop nav spacer
Printable VersionPrintable Version     E-mail this pageE-mail this page
Agricultural Research Service United States Department of Agriculture
Search
  Advanced Search
 
Programs and Projects
Subjects of Investigation
 

Research Project: SUSTAINABLE VINEYARD PRODUCTION SYSTEMS

Location: Crops Pathology and Genetics Research

Title: Population genetics of Eutypa lata in the major grape-growing regions of the world and historical patterns of viticulture.

Authors
item Baumgartner, Kendra
item Travadon, Renaud -
item Rolshausen, Philippe -
item Gubler, W. Douglas -
item Sosnowski, Mark -
item Lecomte, Pascal -
item Halleen, Francois -
item Peros, Jean-Pierre -

Submitted to: Phytopathology
Publication Type: Abstract Only
Publication Acceptance Date: March 1, 2011
Publication Date: August 15, 2012
Repository URL: http://apsjournals.apsnet.org/doi/pdf/10.1094/PHYTO.2011.101.6.S1
Citation: Baumgartner, K., Travadon, R., Rolshausen, P., Gubler, W., Sosnowski, M., Lecomte, P., Halleen, F., Peros, J. 2012. Population genetics of Eutypa lata in the major grape-growing regions of the world and historical patterns of viticulture.. Phytopathology. 101:S14.

Interpretive Summary: The causal agent of Eutypa dieback of grape, Eutypa lata (Ascomycota), is a destructive disease worldwide. The pathogen has a broad host range, but causes severe symptoms on only a few cultivated hosts (e.g., apricot & grape). To decipher its cosmopolitan distribution, we examined the population genetic structure of 19 geographic samples from grape in four continental regions (Australia, California, Europe, So. Africa), based on analyses of 287 isolates genotyped with nine microsatellite markers. High genotypic diversity in all regions (Gd=0.9 to 1) and absence of multilocus linkage disequilibrium among loci supported the importance of sexual reproduction in all regions. The highest allelic richness (R’=3.9) and gene diversity (H=0.66 to 0.69) were in Europe, namely from coastal areas of the Mediterranean Sea. The lowest genetic diversity was in South Africa (R’=1.6 to 2.9; H=0.2 to 0.6). California, Australia and So. Africa, all of which had lower genetic diversity than Europe, were also characterized by demographic disequilibrium and, thus, may represent founding populations of E. lata. Low genetic differentiation among all samples (DEST=0.2, P=0.001; FST=0.03, P=0.001) suggests that gene flow among continents prevents differentiation. Human-mediated spread of E. lata, possibly via infected plant material (from grape or another host), may have resulted in its current global distribution. High genetic diversity of E. lata in European samples near the Mediterranean Sea may reflect this region’s more ancient history of viticulture.

Technical Abstract: The causal agent of Eutypa dieback of grape, Eutypa lata (Ascomycota), is a destructive disease worldwide. The pathogen has a broad host range, but causes severe symptoms on only a few cultivated hosts (e.g., apricot & grape). To decipher its cosmopolitan distribution, we examined the population genetic structure of 19 geographic samples from grape in four continental regions (Australia, California, Europe, So. Africa), based on analyses of 287 isolates genotyped with nine microsatellite markers. High genotypic diversity in all regions (Gd=0.9 to 1) and absence of multilocus linkage disequilibrium among loci supported the importance of sexual reproduction in all regions. The highest allelic richness (R’=3.9) and gene diversity (H=0.66 to 0.69) were in Europe, namely from coastal areas of the Mediterranean Sea. The lowest genetic diversity was in South Africa (R’=1.6 to 2.9; H=0.2 to 0.6). California, Australia and So. Africa, all of which had lower genetic diversity than Europe, were also characterized by demographic disequilibrium and, thus, may represent founding populations of E. lata. Low genetic differentiation among all samples (DEST=0.2, P=0.001; FST=0.03, P=0.001) suggests that gene flow among continents prevents differentiation. Human-mediated spread of E. lata, possibly via infected plant material (from grape or another host), may have resulted in its current global distribution. High genetic diversity of E. lata in European samples near the Mediterranean Sea may reflect this region’s more ancient history of viticulture.

   

 
Project Team
Baumgartner, Kendra
Steenwerth, Kerri
McElrone, Andrew
Kluepfel, Daniel
Sudarshana, Mysore
 
Publications
   Publications
 
Related National Programs
  Plant Diseases (303)
  Crop Production (305)
 
 
Last Modified: 05/20/2013
ARS Home | USDA.gov | Site Map | Policies and Links 
FOIA | Accessibility Statement | Privacy Policy | Nondiscrimination Statement | Information Quality | USA.gov | White House