Vegetable and Forage Crops Production Research Site Logo
ARS Home About Us Helptop nav spacerContact Us En Espanoltop nav spacer
Printable VersionPrintable Version     E-mail this pageE-mail this page
Agricultural Research Service United States Department of Agriculture
Search
  Advanced Search
 
Programs and Projects
Subjects of Investigation
Prosser ARS in the News
Beans
BioFuel
Peas
Potatoes
Weeds
Ornamentals/IR-4
 

Research Project: POTATO GERMPLASM ENHANCEMENT THROUGH TRAIT DISCOVERY, GENETIC EVALUATION AND INCORPORATION

Location: Vegetable and Forage Crops Production Research

Title: Standardized RT-PCR conditions for detection and identification of eleven viruses of potato and Potato spindle tuber viroid

Authors

Submitted to: American Journal of Potato Research
Publication Type: Peer Reviewed Journal
Publication Acceptance Date: April 25, 2011
Publication Date: July 18, 2011
Citation: Crosslin, J., Hamlin, L.L. 2011. Standardized RT-PCR conditions for detection and identification of eleven viruses of potato and Potato spindle tuber viroid. American Journal of Potato Research. 88:333-338.

Interpretive Summary: There are many important virus diseases of potatoes. These include Alfalfa mosaic virus (AMV), Impatiens necrotic spot virus (INSV), Tobacco rattle virus (TRV), Tomato spotted wilt virus (TSWV), Potato leaf roll virus (PLRV), Potato mop top virus (PMTV), Potato virus A (PVA), Potato virus M (PVM), Potato virus S (PVA), Potato virus X (PVX), Potato virus Y (PVY), and Potato spindle tuber viroid (PSTVd). Numerous tests for these viruses are conducted around the world, but each laboratory or region has its own preferred methods for this testing. These methods can be quite diverse and development and validation of the tests can be very time consuming. Here, we report a standard set of conditions for the testing of plants for 11 important viruses of potatoes as well as potato spindle tuber viroid. This information should be of value to research laboratories, seed certification agencies, and commercial testing laboratories

Technical Abstract: Standardized RT-PCR procedures were developed and validated for detection of Alfalfa mosaic virus (AMV), Impatiens necrotic spot virus (INSV), Tobacco rattle virus (TRV), Tomato spotted wilt virus (TSWV), Potato leaf roll virus (PLRV), Potato mop top virus (PMTV), Potato virus A (PVA), Potato virus M (PVM), Potato virus S (PVA), Potato virus X (PVX), Potato virus Y (PVY), and Potato spindle tuber viroid (PSTVd). Under the same conditions the O, N, NTN, and N:O strains of PVY could be differentiated using previously published multiplex primers.

   

 
Project Team
Navarre, Duroy - Roy
Crosslin, James - Jim
Porter, Lyndon
Alva, Ashok
Brown, Charles - Chuck
 
Publications
   Publications
 
Related National Programs
  Plant Genetic Resources, Genomics and Genetic Improvement (301)
 
Related Projects
   SELECTION OF POTATO GERMPLASM RESISTANT TO PURPLE TOP PHYTOPLASMA AND LATE BLIGHT IN THE TOLUCA VALLEY OF MEXICO
   TRANSCRIPTOME ANALYSIS OF POTATO PSYLLIDS AND THE EFFECTS OF TEMPERATURE ON CANDIDATUS LIBERIBACTER SOLANACEARUM INFECTION OF POTATO PSYLLID
   DEVELOPING POTATOES WITH SUPERIOR DISEASE RESISTANCE AND PHYTONUTRIENTS
   ERADICATION OF SOIL PESTS AND PATHOGENS BY CULTIVATION OF NON-HOSTS
   CHARACTERIZATION OF MECHANISMS REGULATING NUTRITIONAL CONTENT AND QUALITY OF SPECIALTY AND PROCESSING POTATOES
   BREEDING FOR RESISTANCE AGAINST ROOT-KNOT NEMATODE IN POTATO
   Development of an integrated research and management program for Zebra Chip of potato
   TECHNICAL ASSISTANCE TO THE ERADICATION OF POTATO CYST NEMATODE IN THE STATE OF IDAHO
   DEVELOPING METHODS TO ERADICATE PCN
   IMPROVED BREEDING AND VARIETY EVALUATION METHODS TO REDUCE ACRYLAMIDE CONTENT AND INCREASE QUALITY IN PROCESSED POTATO PRODUCTS
   FILLING THE GAPS IN NEMATODE MANAGEMENT IN POTATOES
   APPLICATION OF NEW DIAGNOSTIC REAGENTS FOR IDENTIFICATION OF DIVERSE AND NEWLY IDENTIFIED STRAINS OF POTATO VIRUS Y
 
 
Last Modified: 05/18/2013
ARS Home | USDA.gov | Site Map | Policies and Links 
FOIA | Accessibility Statement | Privacy Policy | Nondiscrimination Statement | Information Quality | USA.gov | White House