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United States Department of Agriculture

Agricultural Research Service

Research Project: FORAGE SYSTEMS FOR SUSTAINABLE ANIMAL PRODUCTION IN THE MID-SOUTH Title: Visualizing and Sharing Results in Bioinformatics Projects: GBrowse and GenBank Exports

item Arnaoudova, Elissaveta -
item Bowens, Philip -
item Chui, Roger -
item Dinkins, Randy
item Hesse, Uljana -
item Jaromczyk, Jerzy -
item Martin, Mitchell -
item Maynard, Paul -
item Moore, Neil -
item Schardl, Chris -

Submitted to: BMC Bioinformatics
Publication Type: Abstract Only
Publication Acceptance Date: March 20, 2009
Publication Date: June 25, 2009
Citation: Arnaoudova, E.G., Bowens, P.J., Chui, R.G., Dinkins, R.D., Hesse, U., Jaromczyk, J.W., Martin, M., Maynard, P., Moore, N., Schardl, C.L. 2009. Visualizing and Sharing EResults in Bioinformatics Porjects: GBrowse and GenBank Exports. BMC Bioinformatics. 10(7. A4):1471-2105.

Technical Abstract: Effective tools for presenting and sharing data are necessary for collaborative projects, typical for bioinformatics. In order to facilitate sharing our data with other genomics, molecular biology, and bioinformatics researchers, we have developed software to export our data to GenBank and combined the export utilities with our customized and augmented version of GBrowse. The GBrowse bioinformatics software provides a way for users to graphically view genomic feature data stored in a back-end database. GenBank is an open-access database, maintained by the National Center for Biotechnology Information (NCBI), containing annotated versions of all publicly available DNA sequences.

Last Modified: 8/26/2016
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