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United States Department of Agriculture

Agricultural Research Service

Title: Bos Taurus 60mer Oligonucleotide Microarray

Authors
item Li, Robert
item Capuco, Anthony
item Van Tassell, Curtis
item Sonstegard, Tad
item Connor, Erin
item Gasbarre, Louis

Submitted to: NIH Gene Expression Omnibus (GEO) Database
Publication Type: Other
Publication Acceptance Date: May 1, 2006
Publication Date: May 5, 2006
Citation: Li, R.W., Capuco, A.V., Van Tassell, C.P., Sonstegard, T.S., Connor, E.E., Gasbarre, L.C. 2006. Bos taurus 60mer oligonucleotide microarray. NIH Gene Expression Omnibus (GEO) Database.

Technical Abstract: Bovine high-density long oligonucleotide microarrays were developed, tested and optimized. The bovine microarray with ~345,000 features (60mer oligonucleotides) representing 45,383 cattle unique sequences was designed and produced with Maskless Array Synthesizer technology. The 45,383 unique sequences include 40,808 Tentative Consensus sequences from the TIGR Bos taurus Gene Index (BTGI, release 11.0) plus 4,575 singletons from pooled mammary gland and gut tissues. The microarray is an ideal genomic tool for scientists to study global expression profiles or to analyze the transcriptomes in cattle.

Last Modified: 9/22/2014