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United States Department of Agriculture

Agricultural Research Service

Research Project: Molecular Approaches for the Characterization of Foodborne Pathogens in Poultry Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Mini-review of the chicken gastrointestinal microbiome. - (Peer Reviewed Journal)
Oakley, B.B., Lillehoj, H.S., Kogut, M.H., Kim, W.K., Maurer, J.J., Pedroso, A., Lee, M.D., Collett, S.R., Johnson, T.J., Cox Jr, N.A. 2014. Mini-review of the chicken gastrointestinal microbiome. FEMS Microbiology Letters. p. 100-112. DOI: 10.1111/1574-6968.12608.
Characterization of the Campylobacter jejuni cryptic plasmid pTIW94 recovered from wild birds in the southeastern United States - (Peer Reviewed Journal)
Hiett, K.L., Rothrock Jr, M.J., Seal, B.S. 2013. Characterization of the Campylobacter jejuni cryptic plasmid pTIW94 recovered from wild birds in the southeastern United States . Plasmid Journal. 70:268-271.
Differential Protein Expression between Poor and Robust Colonizing C. jejuni Isolates - (Abstract Only)
(18-Mar-13)
Fluorescence in-situ hybridization (FISH) as a tool for visualization and enumeration of Campylobacter in broiler ceca - (Abstract Only)
Oakley, B., Yoon, S.C., Line, J.E., Berrang, M.E., Buhr, R.J., Cox Jr, N.A. 2013. Fluorescence in-situ hybridization (FISH) as a tool for visualization and enumeration of Campylobacter in broiler ceca. International Poultry Scientific Forum. P.53.
The poultry-associated microbiome: network analysis and characterization along the farm-to-fork continuum - (Peer Reviewed Journal)
Oakley, B., Morales, C., Line, J.E., Berrang, M.E., Meinersmann, R.J., Tillman, G.E., Wise, M.G., Siragusa, G.R., Hiett, K.L., Seal, B.S. 2013. The poultry-associated microbiome: network analysis and characterization along the farm-to-fork continuum. PLoS One. 8(2):e57190.
Polymerase chain reaction detection of naturally occurring Campylobacter in commercial broiler chicken embryos - (Peer Reviewed Journal)
Hiett, K.L., Cox Jr, N.A., Rothrock Jr, M.J. 2013. Polymerase chain reaction detection of naturally occurring Campylobacter in commercial broiler chicken embryos. Poultry Science. 92(4):1134-1137.
Avian Metapneumoviruses - (Book / Chapter)
(21-Sep-12)
Pyrosequencing-based validation of a simple cell-suspension polymerase chain reaction assay for Campylobacter... of high-processivity polymerase with novel internal amplification controls for rapid and specific detection. - (Peer Reviewed Journal)
Oakley, B., Line, J.E., Berrang, M.E., Johnson, J., Buhr, R.J., Cox Jr, N.A., Hiett, K.L., Seal, B.S. 2012. Pyrosequencing-based validation of a simple cell-suspension polymerase chain reaction assay for Campylobacter with application of high-processivity polymerase with novel internal amplification controls for rapid and specific detection. Diagnostic Microbiology and Infectious Disease. 72(2):131-138.
ThermoPhyl: a software tool for selecting phylogenetically optimized conventional and quantitative-PCRtaxon-targeted assays for usewith complex samples - (Peer Reviewed Journal)
Oakley, B., Dowd, S.E., Purdy, K. 2011. Pyrosequencing-based validation of a simple cell-suspension PCR assay for Campylobacter with application of high-processivity polymerase with novel internal amplification controls for rapid and specific detection.. FEMS Microbiology Ecology. 77(1):17-27.
Ovine pedomics: the first study of the ovine foot 16S rRNA-based microbiome - (Peer Reviewed Journal)
(04-Feb-11)
Last Modified: 8/27/2015
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