Page Banner

United States Department of Agriculture

Agricultural Research Service

Research Project: FUNCTIONAL GENOMICS OF CEREAL DISEASE DEFENSE

Location: Corn Insects and Crop Genetics Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Code-assisted discovery of TAL effector targets in bacterial leaf streak of rice reveals contrast with bacterial blight and a novel susceptibility gene - (Peer Reviewed Journal)
Cernadas, R.A., Doyle, E.L., Nino-Liu, D., Wilkins, K.E., Bancroft, T., Wang, L., Schmidt, C., Caldo, R., Yang, B., White, F.F., Nettleton, D., Wise, R.P., Bogdanove, A. 2014. Code-assisted discovery of TAL effector targets in bacterial leaf streak of rice reveals contrast with bacterial blight and a novel susceptibility gene. PLoS Pathogens. DOI: 10.1371/journal.ppat.1003972.
Mla- and Rom1-mediated control of microRNA398 and chloroplast copper/zinc superoxide dismutase regulates cell death in response to the barley powdery mildew fungus - (Peer Reviewed Journal)
Xu, W., Meng, Y., Wise, R.P. 2014. Mla- and Rom1-mediated control of microRNA398 and chloroplast copper/zinc superoxide dismutase regulates cell death in response to the barley powdery mildew fungus. New Phytologist. 201(4):1396-1412.
Host-Induced gene silencing in barley powdery mildew reveals a class of ribonuclease-like effectors - (Peer Reviewed Journal)
Pliego, C., Nowara, D., Bonciani, G., Gheorghe, D., Xu, R., Surana, P., Whigham, E., Nettleton, D., Bogdanove, A., Wise, R.P., Schweizer, P., Bindschedler, L., Spanu, P. 2013. Host-Induced gene silencing in barley powdery mildew reveals a class of ribonuclease-like effectors. Molecular Plant-Microbe Interactions. 26(6):633-642.
Crw1 a Novel Maize Mutant Highly Susceptible to Foliar Damage by the Western Corn Rootworm Beetle - (Peer Reviewed Journal)
Venkata, B., Lauter, N.C., Li, X., Chapple, C., Krupke, C., Johal, G., Moose, S. 2013. CRW1- A novel maize mutant highly susceptible to foliar damage by the Western corn rootworm beetle. PLoS One. 8(8):e71296.
Genetic and morphometric analysis of cob architecture and biomass related traits in the intermated B73xMo17 recombinant inbred lines of maize - (Peer Reviewed Journal)
Jansen, C., De Leon, N., Lauter, N.C., Hirsch, C., Ruff, L., Luebberstedt, T. 2013. Genetic and morphometric analysis of cob architecture and biomass related traits in the intermated B73xMo17 recombinant inbred lines of maize. BioEnergy Research. 6(3):903-916.
A physical, genetic and functional sequence assembly of the barley genome - (Peer Reviewed Journal)
Mayer, K., Waugh, R., Langridge, P., Close, T.J., Wise, R.P., Graner, A., Matsumoto, T., Sato, K., Schulman, A., Muehlbaueer, G.J., Stein, N., Ariyadasa, R., Schulte, D., Poursarebani, N., Zhou, R., Steuernagel, B., Mascher, M., Scholz, U., Shi, B., Madishetty, K., Svensson, J.T., Bhat, P., Moscou, M., Resnik, J., Hedley, P., Liu, H., Morris, J., Frenkel, Z., Korol, A., Berges, H., Taudien, S., Felder, M., Groth, M., Platzer, M., Himmelbach, A., Lonardi, S., Duma, D., Alpert, M., Cordero, F., Beccuti, M., Ciardo, G., Ma, Y., Wanamaker, S., Cattonaro, F., Vendramin, V., Scalabrin, S., Radovic, S., Wing, R., Morgante, M., Nussbaumer, T., Gundlach, H., Martis, M., Poland, J.A., Spannagl, M., Pfeifer, M., Moisy, C., Tanskanen, J., Zuccolo, A., Russell, J., Druka, A., Marshall, D., Bayer, M., Sampath, D., Febrer, M., Caccamo, M., Tanaka, T., Platzer, M., Fincher, G., Schmutzer, T. 2012. A physical, genetic and functional sequence assembly of the barley genome. Nature. 491:711-716.
Flor revisited (again): eQTL and mutational analysis of NB-LRR mediated immunity to powdery mildew in barley - (Peer Reviewed Journal)
Wise, R.P., Surana, P., Fuerst, G.S., Xu, R., Mistry, D., Dickerson, J., Nettleton, D. 2014. Flor revisited (again): eQTL and mutational analysis of NB-LRR mediated immunity to powdery mildew in barley. Journal of Integrative Agriculture. 13(2):237-243.
TEnest 2.0: Computational annotation and visualization of nested transposable elements - (Book / Chapter)
Kronmiller, B.A., Wise, R.P. 2013. TEnest 2.0: Computational annotation and visualization of nested transposable elements. In: Peterson, T., editor. Methods in Molecular Biology. New York, NY: Springer. p. 305-320.
HvWRKY10, HvWRKY19, and HvWRKY28 positively regulate Mla-triggered immunity and basal defense to barley powdery mildew - (Peer Reviewed Journal)
Meng, Y., Wise, R.P. 2012. HvWRKY10, HvWRKY19, and HvWRKY28 positively regulate Mla-triggered immunity and basal defense to barley powdery mildew. Molecular Plant-Microbe Interactions. DOI:10.1094/MPMI-04-12-0082-R.
iTAG Barley: A 9-12 classroom module to explore gene expression and segregation using Oregon Wolfe Barley - (Book / Chapter)
Maffin, L., Hall, G., Hubbard, T., Whigham, E., Wise, R.P. 2012. iTAG Barley: A 9-12 classroom module to explore gene expression and segregation using Oregon Wolfe Barley. American Society of Plant Biologists. http://c.ymcdn.com/sites/my.aspb.org/resource/group/a9372bf4-9ae4-4d0b-ad0c-595c9dfc3543/itag_v20_march_2013.pdf.
PLEXdb: Gene expression resources for plants and plant pathogens - (Peer Reviewed Journal)
Dash, S., Van Hemert, J., Hong, L., Wise, R.P., Dickerson, J.A. 2011. PLEXdb: Gene expression resources for plants and plant pathogens. Nucleic Acids Research. 40(D1):D1194-D1201.
QTL mapping and candidate gene analysis of telomere length control factors in maize (Zea mays L.) - (Peer Reviewed Journal)
Brown, A.N., Lauter, N.C., Vera, D.L., McLaughlin-Large, K.A., Steele, T.M., Fredette, N.C., Bass, H.W. 2011. QTL mapping and candidate gene analysis of telomere length control factors in maize (Zea mays L.). Genes, Genomes, Genetics. 1(6):437-450.
Rf8-mediated T-urf13 transcript accumulation coincides with a pentatricopeptide repeat cluster on maize chromosome 2L - (Peer Reviewed Journal)
Meyer, J.M., Pei, D., Wise, R.P. 2011. Rf8-mediated T-urf13 transcript accumulation coincides with a pentatricopeptide repeat cluster on maize chromosome 2L. The Plant Genome. 4(3):283-299.
Last Modified: 9/23/2014
Footer Content Back to Top of Page