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United States Department of Agriculture

Agricultural Research Service

Research Project: GENETIC MECHANISMS AND MOLECULAR GENETIC RESOURCES FOR MAIZE

Location: Plant Genetics Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Genetics and consequences of crop domestication - (Review Article)
Flint Garcia, S.A. 2013. Genetics and consequences of crop domestication. Journal of Agricultural and Food Chemistry. 61:8267-8276.
The genetic architecture of maize stalk strength     Reprint Icon - (Peer Reviewed Journal)
Peiffer, J.A., Flint Garcia, S.A., De Leon, N.N., McMullen, M.D., Kaeppler, S.M., Buckler IV, E.S. 2013. The genetic architecture of maize stalk strength. PLoS One. 8(6):e67066. Available: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0067066#pone-0067066-g005.
The desert moss Pterygoneurum lamellatum (Pottiaceae) exhibits an inducible ecological strategy of desiccation tolerance: effects of rate of drying on shoot damage and regeneration     Reprint Icon - (Peer Reviewed Journal)
Stark, L., Greenwood, J., Brinda, J., Oliver, M.J. 2013. The desert moss Pterygoneurum lamellatum (Pottiaceae) exhibits an inducible ecological strategy of desiccation tolerance: effects of rate of drying on shoot damage and regeneration. American Journal of Botany. 100(8): 1522-1531.
Genetic variability of oxalate oxidase activity and elongation in water-stressed primary roots of diverse maize and rice lines     Reprint Icon - (Peer Reviewed Journal)
Voothuluru, P., Thompson, H.J., Flint Garcia, S.A., Sharp, R.E. 2013. Genetic variability of oxalate oxidase activity and elongation in water-stressed primary roots of diverse maize and rice lines. Plant Signaling and Behavior. 8:e23454. Available: http://www.landesbioscience.com/journals/psb/article/23454/.
The response of Asterochloris erici (Ahmadjian) Skaloud et Peksa to desiccation: a proteomic approach     Reprint Icon - (Peer Reviewed Journal)
Gasulla, F., Jain, R., Barrano, E., Guera, A., Balbuena, T., Thelen, J., Oliver, M.J. 2013. The response of Asterochloris erici (Ahmadjian) Skaloud et Peksa to desiccation: a proteomic approach. Plant Cell and Environment. 36:1363-1378.
Metabolomic profiling in Selaginella lepidophylla at various hydration states provides new insights into the mechanistic basis of desiccation tolerance     Reprint Icon - (Peer Reviewed Journal)
Yobi, A., Wone, B., Xu, W., Alexander, D.C., Lining, G., Ryals, J.A., Oliver, M.J., Cushman, J.C. 2013. Metabolomic profiling in Selaginella lepidophylla at various hydration states provides new insights into the mechanistic basis of desiccation tolerance. Molecular Plant. 6(2):369-385.
An overview of the biocreative 2012 workshop track III: Interactive text mining task     Reprint Icon - (Peer Reviewed Journal)
Arighi, C.N., Carterette, B., Krallinger, M., Wilbur, J.W., Fey, P., Dodson, R., Cooper, L., Van Slyke, C.E., Dahdul, W., Mabee, P., Schaeffer, M.L., et al 2013. An overview of the biocreative 2012 workshop track III: Interactive text mining task. Database: The Journal of Biological Databases and Curation. 2012:1-18. Available: http://database.oxfordjournals.org/content/2013/bas056.full.
The plant ontology as a tool for comparative plant anatomy and genomic analyses     Reprint Icon - (Peer Reviewed Journal)
Cooper, L., Walls, R.L., Elser, J., Gandolfo, M.A., Stevenson, D.W., Smith, B., Preece, J., Athreya, B., Mungall, C.J., Rensing, S., Hiss, M., Lang, D., Reski, R., Berardini, T.Z., Li, D., Huala, E., Schaeffer, M.L., Menda, N., Arnaud, E., Shrestha, R., Yamazaki, Y., Jaiswal, P. 2013. The plant ontology as a tool for comparative plant anatomy and genomic analyses. Plant Cell Physiology. 54(2):1-23.
Biomass production, nutritional and mineral content of desiccation-sensitive and desiccation-tolerant species of sporobolus under multiple irrigation regimes     Reprint Icon - (Peer Reviewed Journal)
Yobi, A., Wone, B., Schlauch, K., Perryman, B., Oliver, M.J., Cushman, J. 2013. Biomass production, nutritional and mineral content of desiccation-sensitive and desiccation-tolerant species of sporobolus under multiple irrigation regimes. Journal of Agronomy and Crop Science. 199:309-320.
Comparative metabolic profiling between desiccation-sensitive and desiccation-tolerant species of Selaginella reveals insights into the resurrection trait - (Peer Reviewed Journal)
Yobi, A., Wone, B., Xu, W., Alexander, D.C., Guo, L., Ryals, J.A., Oliver, M.J., Cushman, J.C. 2012. Comparative metabolic profiling between desiccation-sensitive and desiccation-tolerant species of Selaginella reveals insights into the resurrection trait. Plant Journal. 72:983-999.
The Global Plant Council: Increasing the impact of plant research to meet global challenges - (Other)
Gruissem, W., Lee, C., Oliver, M.J., Pogson, B. 2012. The Global Plant Council: Increasing the impact of plant research to meet global challenges. Journal of Plant Biology. 55:343-348.
A genome-wide regulatory framework identifies maize Pericarp Color1 (P1) controlled genes - (Peer Reviewed Journal)
Morohashi, K., Casas, M., Falcone-Ferreyra, L., Yilmaz, A., Pourcel, L., Guerra, M., McMullen, M.D., Grotewold, E. 2012. A genome-wide regulatory framework identifies maize Pericarp Color1 (P1) controlled genes. The Plant Cell. 24:2745-2764.
Plant databases and data analysis tools - (Book / Chapter)
(16-Apr-12)
POPcorn: An online resource providing access to distributed and diverse maize project data     Reprint Icon - (Peer Reviewed Journal)
Cannon, E.K., Birkett, S.M., Braun, B.L., Kodavali, S., Jennewein, D.M., Yilmaz, A., Antonescu, V., Antonescu, C., Harper, E.C., Gardiner, J.M., Schaeffer, M.L., Campbell, D.A., Andorf, C.M., Andorf, D., Lisch, D., Koch, K.K., McCarty, D.R., Quackenbush, J., Grotewold, E., Lushbough, C.M., Sen, T.Z., Lawrence, C.J. 2011. POPcorn: An online resource providing access to distributed and diverse maize project data. International Journal of Plant Genomics. 2011:Article 923035. Available http://www.hindawi.com/journals/ijpg/2011/923035.
Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels     Reprint Icon - (Peer Reviewed Journal)
Cook, J.P., McMullen, M.D., Holland, J.B., Tian, F., Bradbury, P., Ross-Ibarra, J., Buckler IV, E.S., Flint-Garcia, S.A. 2012. Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels. Plant Physiology. 158:824-834.
Extended periods of hydration do not elicit dehardening to desiccation tolerance in regeneration trials of the moss Syntrichia caninervis - (Peer Reviewed Journal)
Stark, L.R., Brinda, J.C., McLetchie, N.D., Oliver, M.J. 2012. Extended periods of hydration do not elicit dehardening to desiccation tolerance in regeneration trials of the moss Syntrichia caninervis. International Journal of Plant Science. 173(4):333-343.
Computable visually observed phenotype ontological framework for plants - (Peer Reviewed Journal)
Harnsomburana, J., Green, J., Barb, A., Schaeffer, M.L., Vincent, L., Shyu, C. 2011. Computable visually observed phenotype ontological framework for plants. BMC Bioinformatics. 12:260. Available: http://www.biomedcentral.com/1471-2105/12/260.
MaizeGDB: Curation and outreach go hand-in-hand - (Peer Reviewed Journal)
Schaeffer, M.L., Harper, E.C., Gardiner, J.M., Andorf, C.M., Campbell, D.A., Cannon, E.K., Sen, T.Z., Lawrence, C.J. 2011. MaizeGDB: Curation and outreach go hand-in-hand. Database: The Journal of Biological Databases and Curation. 2011:Article bar022. Available: http://database.oxfordjournals.org/content/2011/bar022.long.
Identification of the Pr1 gene product completes the anthocyanin biosynthesis pathway of maize - (Peer Reviewed Journal)
Sharma, M., Cortes-Cruz, M., Ahern, K., McMullen, M.D., Brutnell, T., Chopra, S. 2011. Identification of the Pr1 gene product completes the anthocyanin biosynthesis pathway of maize. Genetics. 188:69-79.
Last Modified: 4/20/2014
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