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United States Department of Agriculture

Agricultural Research Service

Research Project: CONSERVATION AND CHARACTERIZATION OF GERMPLASM OF SELECTED VEGETABLE CROPS Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

A phylogenomic analysis of the grape genus (Vitis) reveals broad reticulation and concurrent diversification during quaternary climate change - (Peer Reviewed Journal)
Wan, Y., Schwaninger, H.R., Baldo, A.M., Labate, J.A., Simon, C., Zhong, G. 2013. A phylogenomic analysis of the grape genus (Vitis) reveals broad reticulation and concurrent diversification during quaternary climate change. BMC Evlutionary Biology. 13:141.
Genotype and environmental interaction for fruit quality traits in vintage tomato varieties - (Peer Reviewed Journal)
Panthee, D., Labate, J.A., Mcgrath, M., Francis, D., Breksa III, A.P., Robertson, L.D. 2013. Genotype and environmental interaction for fruit quality traits in vintage tomato varieties. Euphytica. 193:169-182.
Evaluation of tomato germplasm for flavor and flavor contributing components - (Peer Reviewed Journal)
Panthee, D.R., Labate, J.A., Robertson, L.D. 2013. Evaluation of tomato germplasm for flavor and flavor contributing components. Plant Genetic Resources: Characterization and Utilization. 11:106-113.
Tomato (Solanum section Lycopersicon spp.) phylogenetic study: aligned genomic sequences for 47 markers used to analyze introgression in domesticated tomato     Reprint Icon - (Other)
Labate, J.A., Robertson, L.D. 2012. Tomato (Solanum section Lycopersicon spp.) phylogenetic study: aligned genomic sequences for 47 markers used to analyze introgression in domesticated tomato. European Molecular Biology. European Nucleotide Archive Accessions HE977919-HE978211.
Evidence of cryptic introgression in tomato (Solanum lycopersicum L.) based on wild tomato species alleles - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D. 2012. Evidence of cryptic introgression in tomato (Solanum lycopersicum L.) based on wild tomato species alleles. Biomed Central (BMC) Plant Biology. 12:133.
Mining wild species elleles from introgressed genotypes - (Abstract Only)
Labate, J.A., Robertson, L.D. 2012. Mining wild species elleles from introgressed genotypes. ASA-CSSA-SSSA Annual Meeting. Paper No. 1.
Evaluation of tomato germplasm for flavor and flavor-contributing components - (Abstract Only)
Panthee, D., Labate, J.A., Robertson, L.D. 2012. Evaluation of tomato germplasm for flavor and flavor-contributing components. Proceedings American Society of Horticultural Sciences. Vol. 109, p. 90.
Magnitude of genotype x environment interactions affecting tomato fruit quality - (Peer Reviewed Journal)
Panthee, D., Cao, C., Debenport, S., Rodriguez, G., Labate, J.A., Robertson, L.D., Breksa Iii, A.P., Van Der Knaap, E., Mcspadden-Gardener, B. 2012. Magnitude of genotype x environment interactions affecting tomato fruit quality. HortScience. 47:721-726.
Biochemical evaluation of tomato germplasm part I: workflow and methods - (Abstract Only)
Robertson, L.D., Sheffer, S.M., Labate, J.A. 2012. Biochemical evaluation of tomato germplasm part I: workflow and methods. Plant Germplasm Operations Committee Meeting. Vol. 4, p. 1.
Biochemical evaluation of tomato germplasm part II: evaluation of a core collection - (Abstract Only)
Labate, J.A., Sheffer, S.M., Panthee, D., Robertson, L.D. 2012. Biochemical evaluation of tomato germplasm part II: evaluation of a core collection. Plant Germplasm Operations Committee Meeting. Vol. 4, P. 1.
Use of DNA sequence data to interpret diversity in tomato - (Abstract Only)
Labate, J.A., Robertson, L.D. 2012. Use of DNA sequence data to interpret diversity in tomato. Plant Germplasm Operations Committee Meeting. Vol 4, p. 1..
Phenotypic and molecular variation in 44 vintage tomato varieties - (Proceedings)
Labate, J.A., Panthee, D., Mcgrath, M., Francis, D., Breksa Iii, A.P., Robertson, L.D. 2011. Phenotypic and molecular variation in 44 vintage tomato varieties. Tomato Breeders Roundtable Proceedings. Vol. 43, p. 10.
AlleleCoder: a PERL script for coding codominant polymorphism data for PCA analysis - (Review Article)
Baldo, A.M., Francis, D., Caramante, M., Robertson, L.D., Labate, J.A. 2011. AlleleCoder: a PERL script for coding codominant polymorphism data for PCA analysis. Plant Genetic Resources: Characterization and Utilization. 10: 1-3.
Diversity and population structure in a geographical sample of tomato (Solanum lycopersicum L.) accessions - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Balch, T., Sheffer, S.M. 2011. Diversity and population structure in a geographical sample of tomato (Solanum lycopersicum L.) accessions. Crop Science. 51:1068-1079.
Comparing alleles between wild and domesticated tomato - (Other)
Baldo, A.M., Robertson, L.D., Labate, J.A. 2010. Comparing alleles between wild and domesticated tomato. Plant Genome Conference Proceedings.
Diversity in a Collection of Heirloom Tomato Varieties - (Other)
Labate, J.A., Francis, D., Mcgrath, M., Panthee, D., Robertson, L.D. 2010. Diversity in a Collection of Heirloom Tomato Varieties. Annual Meeting Horticultural Society.HortScience 45:S145.
Single nucleotide polymorphisms (SNPs) in a set of expressed-sequence tag (EST) and conserved ortholog set II (COSII) markers in cultivated tomato (Solanum lycopersicum L.) - (Other)
Labate, J.A., Robertson, L.D. 2010. Single nucleotide polymorphisms (SNPs) in a set of expressed-sequence tag (EST) and conserved ortholog set II (COSII) markers in cultivated tomato (Solanum lycopersicum L.). National Center for Biotechnology Information (NCBI).
Characterization of Nutritionally Important Carotenoids in Welsh Onion Accessions - (Peer Reviewed Journal)
Kopsell, D.A., Carl, S., Deyton, D., Abney, K., Kopsell, D., Robertson, L.D. 2010. Characterization of Nutritionally Important Carotenoids in Welsh Onion Accessions. HortScience. 45(3):463-465.
Characterization of alleles in a diversity panel of tomato - (Other)
Labate, J.A., Robertson, L.D., Baldo, A.M. 2009. Characterization of alleles in a diversity panel of tomato [abstract]. American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America Int'l Annual Meetings, Pittsburgh, PA. oral presentation 86-6.
Phenotypic Characterization of a Diversity Panel of Tomato - (Other)
Robertson, L.D., Balch, T., Sheffer, S.M., Labate, J.A. 2009. Phenotypic Characterization of a Diversity Panel of Tomato. ASA-CSSA-SSSA Int'l Annual Meetings, poster presentation 85-5, Pittsburgh, PA.
Identification of Crucifer Accessions from the NC-7 and NE-9 Plant Introduction Collections that are Resistant to Black Rot (Xanthomonas campestris pv. campestris) Races 1 and 4 - (Peer Reviewed Journal)
Griffiths, P.D., Marke, L.F., Robertson, L.D. 2009. Identification of Crucifer Accessions from the NC-7 and NE-9 Plant Introduction Collections that are Resistant to Black Rot (Xanthomonas campestris pv. campestris) Races 1 and 4 . HortScience 44:284-288.
Multilocus sequence data reveal extensive departures from equilibrium in domesticated tomato (Solanum lycopersicum L.) - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Baldo, A.M. 2009. Multilocus sequence data reveal extensive departures from equilibrium in domesticated tomato (Solanum lycopersicum L.). Heredity 103:257-267.
Est, Cosii, and Arbitrary Gene Markers Give Similar Estimates of Nucleotide Diversity in Cultivated Tomato (Solanum Lycopersicum) - (Peer Reviewed Journal)
Labate, J.A., Robertson, L.D., Wu, F., Tanksley, S.D., Baldo, A.M. 2009. EST, COSII, and arbitrary gene markers give similar estimates of nucleotide diversity in cultivated tomato (Solanum lycopersicum). Journal of Theoretical and Applied Genetics. 118:1005-1014.
Last Modified: 11/26/2014
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