Page Banner

United States Department of Agriculture

Agricultural Research Service

Related Topics

Research Project: MANAGEMENT OF NEMATODES AND VIRUS DISEASES AFFECTING POTATO AND GRAIN CROPS

Location: Biological Integrated Pest Management Unit

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Synergistic interaction of CLAVATA1, CLAVATA2, and RECEPTOR-LIKE PROTEIN KINASE 2 in cyst nematode parasitism of Arabidopsis - (Peer Reviewed Journal)
Replogle,, A., Wang,, J., Paolillo,, V., Smeda,, J., Kionoshita,, A., Durbak,, A., Tax,, F., Wang, X., Sawa,, S., Mitchum,, M.G. 2013. Synergistic interaction of CLAVATA1, CLAVATA2, and RECEPTOR-LIKE PROTEIN KINASE 2 in cyst nematode parasitism of Arabidopsis. Molecular Plant-Microbe Interactions. 26:87-96.
Role of nematode peptides and other small molecules in plant parasitism - (Review Article)
Mitchum, M.G., Wang, X., Wang, J., Davis, E.L. 2012. Role of nematode peptides and other small molecules in plant parasitism. Annual Review of Phytopathology. 50:175-195.
Cross-linking measurements of the potato leafroll virus reveal protein interaction topologies required for virion stability, aphid transmission, and virus-plant interactions - (Peer Reviewed Journal)
Chavez, J., Cilia, M., Ju, H., Weisbrod, C., Eng, J.K., Gray, S.M., Bruce, J.E. 2012. Cross-linking measurements of the potato leafroll virus reveal protein interaction topologies required for virion stability, aphid transmission, and virus-plant interactions. Journal of Proteome Research. 11(5):2968-2981.
Homopteran vector biomarkers for efficient circulative plant virus transmission are conserved in multiple aphid species and the whitefly Bemisia tabaci - (Peer Reviewed Journal)
Cilia, M., Bereman, M., Fish, T., Maccoss, M.J., Gray, S.M. 2012. Homopteran vector biomarkers for efficient circulative plant virus transmission are conserved in multiple aphid species and the whitefly Bemisia tabaci. Journal of Integrative Agriculture. 11(2):249-262.
Mechanisms of molecular mimicry of plant CLE peptide ligands by the parasitic nematode Globodera rostochiensis - (Peer Reviewed Journal)
Guo, Y., Ni, J., Denver, R., Wang, X., Clark, S.E. 2011. Mechanisms of molecular mimicry of plant CLE peptide ligands by the parasitic nematode Globodera rostochiensis. Plant Physiology. 157:476-484. DOI: 10.1104/PP.2011-180554.
Transmission efficiency of Potato virus Y strains PVYO and PVYN-Wi by five aphid species - (Peer Reviewed Journal)
Mello, A., Olarte, R.A., Gray, S.M., Perry, K.L. 2011. Transmission efficiency of Potato virus Y strains PVYO and PVYN-Wi by five aphid species. Plant Disease. Available: https//apsjournals.apsnet.org/DOI: 10.1094/PDIS-11-10-0855.
Identification of the molecular make-up of the Potato virus Y strain PVYZ: genetic typing of the PVYZ-NTN - (Peer Reviewed Journal)
Kerlan, C., Nikolaeva, O.V., Hu, X., Meacham, T., Gray, S.M., Karasev, A. 2011. Identification of the molecular make-up of the Potato virus Y strain PVYZ: genetic typing of the PVYZ-NTN. Phytopathology. 101:1052-1060.
Biomarker discovery from the top down: protein biomarkers for efficient virus transmission by insects (Homoptera: Aphididae) discovered by coupling genetics and 2-D DIGE - (Peer Reviewed Journal)
Cilia, M., Howe, K.J., Fish, T., Smith, D., Mahoney, J., Tamborindeguy, C., Burd, J.D., Thannhauser, T.W., Gray, S.M. 2011. Biomarker discovery from the top down: protein biomarkers for efficient virus transmission by insects (Homoptera: Aphididae) discovered by coupling genetics and 2-D DIGE. Proteomics. 11:2440-2458.
The novel cyst nematode effector protein 19C07 interacts with the Arabidopsis auxin influx transporter LAX3 to control feeding site development - (Peer Reviewed Journal)
Lee,, C., Chronis, D.N., Kenning,, C., Peret,, B., Hewezi,, T., Davis,, E.L., Baum,, T.J., Hussey,, R., Bennett,, M., Mitchum,, M.G. 2011. The novel cyst nematode effector protein 19C07 interacts with the Arabidopsis auxin influx transporter LAX3 to control feeding site development. Plant Physiology. 155:866-880.
Identification of potential host plant mimics of CLAVATA3/ESR (CLE)-like peptides from the plant-parasitic nematode Heterodera schachtii - (Peer Reviewed Journal)
Wang, J., Replogle, A., Hussey, R., Baum, T., Wang, X., Davis, E.L., Mitchum, M.G. 2011. Identification of potential host plant mimics of CLAVATA3/ESR (CLE)-like peptides from the plant-parasitic nematode Heterodera schachtii. Molecular Plant Pathology. 12:177-186.
Nematode CLE signaling in Arabidopsis requires CLAVATA2 and CORYNE - (Peer Reviewed Journal)
Replogle, A., Wang, J., Bleckmann, A., Hussey, R.S., Baum, T.J., Sawa, S., Davis, E.L., Wang, X., Simon, R., Mitchum, M.G. 2010. Nematode CLE signaling in Arabidopsis requires CLAVATA2 and CORYNE. Plant Journal. 65:430-440.
Genetics coupled to quantitative intact proteomics links heritable aphid and endosymbiont protein isoform expression to polerovirus transmission - (Peer Reviewed Journal)
Cilia, M., Tamborindeguy, C., Fish, T., Howe, K.J., Thannhauser, T.W., Gray, S.M. 2011. Genetics coupled to quantitative intact proteomics links heritable aphid and endosymbiont protein isoform expression to polerovirus transmission. Journal of Virology. 85(5):2148-2166.
Tangible benefits of the pea aphid genome sequencing in proteomics research: enhancements in protein identification, data incorporation, and evaluation criteria - (Peer Reviewed Journal)
Cilia, M., Thannhauser, T.W., Gray, S.M. 2010. Tangible benefits of the pea aphid genome sequencing in proteomics research: enhancements in protein identification, data incorporation, and evaluation criteria. Journal of Insect Physiology. Available: http://www.ncbi.nlm.nih.gov/pubmed/21070785.
The changing face of Potato virus Y - (Popular Publication)
Gray, S.M., Karasev, A., Lorenzen, J., Whitworth, J.L., Nolte, P., Groves, R., Charkowski, A. 2010. The changing face of Potato virus Y. Plant Management Network. Available: http://www.plantmanagementnetwork.org/edcenter/seminars/Potato/PotatoVirusY/player.html.
Variability and the recognition of two races in Meloidogyne graminicola - (Peer Reviewed Journal)
Pokharel, R.R., Abawi, G.S., Duxbury, J.M., Smart, C.D., Wang, X., Brito, J.A. 2010. Variability and the recognition of two races in Meloidogyne graminicola. Australasian Plant Pathology. 39:326-333.
Chorismate mutase: an alternatively spliced parasitism gene and a diagnostic marker for three important Globodera nematode species - (Peer Reviewed Journal)
Yu, H., Chronis, D.N., Lu, S., Wang, X. 2011. Chorismate mutase: an alternatively spliced parasitism gene and a diagnostic marker for three important Globodera nematode species. European Journal of Plant Pathology. 129:89-102.
Potato virus Y: an evolving concern for potato crops in the United States and Canada - (Peer Reviewed Journal)
Gray, S.M., De Boer, S., Lorenzen, J., Karasev, A., Whitworth, J.L., Nolte, P., Singh, R., Boucher, A., Xu, H. 2010. Potato virus Y: an evolving concern for potato crops in the United States and Canada. Plant Disease. 94:1384-1397.
Diverse CLE peptides from cyst nematode species - (Abstract Only)
Chen,, S., Lu, S., Yu, H., Mitchum, M., Wang, X. 2010. Diverse CLE peptides from cyst nematode species. Meeting Abstract. p. 20.
The identification of protein biomarkers distinguishing virus transmission competent and refractive insect populations by coupling genetics with quantitative intact proteomics - (Proceedings)
Cilia, M., Tamborindeguy, C., Thannhauser, T.W., Gray, S.M. 2010. The identification of protein biomarkers distinguishing virus transmission competent and refractive insect populations by coupling genetics with quantitative intact proteomics. Journal of American Society for Mass Spectrometry. 58:42.
Dual roles for the variable domain in protein trafficking and host-specific recognition of Heterodera glycines CLE effector proteins - (Peer Reviewed Journal)
Wang, J., Lee, C., Replogle, A., Joshi, S., Korkin, D., Hussey, R., Baum, T., Davis, E., Wang, X., Mitchum, M.G. 2010. Dual roles for the variable domain in protein trafficking and host-specific recognition of Heterodera glycines CLE effector proteins. New Phytologist. 187:1003-1017.
The proteomics toolbox for agricultural research: precision biomarker discovery using genetics - (Proceedings)
Cilia, M., Tamborindeguy, C., Thannhauser, T.W., Gray, S.M. 2010. The proteomics toolbox for agricultural research: precision biomarker discovery using genetics. Journal of Agricultural and Urban Entomology. 27:20.
Combined use of 2-D reverse phase chromatography & data independent mass spectrometry simultaneously characterizing proteomes of Schizaphis graminum & its obligate endosymbiont Buchnera aphidicola, from whole aphid extracts - (Abstract Only)
Mclaughlin, M., Cilia, M., Howe, K.J., Gray, S.M., Thannhauser, T.W. 2010. Combined use of 2-D reverse phase chromatography & data independent mass spectrometry simultaneously characterizing proteomes of Schizaphis graminum & its obligate endosymbiont Buchnera aphidicola, from whole aphid extracts. Journal of Biomolecular Techniques. 21(3):S58.
Serological properties of ordinary and necrotic isolates of potato virus Y: a case study of PVYN misidentification - (Peer Reviewed Journal)
Karasev, A.V., Nikolaeva, O.V., Hu, X., Sielaff, Z., Whitworth, J.L., Lorenzen, J., Gray, S.M. 2009. Serological properties of ordinary and necrotic isolates of potato virus Y: a case study of PVYN misidentification. American Journal of Potato Research. 87:1-9. Available: http://www.springerlink.com/content/04u8141225868w72/
A Comparison of Protein Extraction Methods Suitable for Gel-Based Proteomics Studies of Aphid Proteins - (Peer Reviewed Journal)
Cilia, M., Fish, T., Yang, X., Mclaughlin, M., Thannhauser, T.W., Gray, S.M. 2009. A Comparison of Protein Extraction Methods Suitable for Gel-Based Proteomics Studies of Aphid Proteins. Journal of Biomolecular Techniques. 20(4):201-215.
The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem - (Peer Reviewed Journal)
Peter, K., Gildow, F., Palukaitis, P., Gray, S.M. 2009. The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem. Journal of Virology. 83(11):5419-5429.
A novel recombinant strain of Potato virus Y allows identification of a new viral genetic determinant of vein necrosis in tobacco - (Peer Reviewed Journal)
Hu, X., Meacham, T., Ewing, L., Gray, S.M., Karasev, A.V. 2009. A novel recombinant strain of Potato virus Y allows identification of a new viral genetic determinant of vein necrosis in tobacco. Virus Genes. 143(1):68-76.
Cellular targeting and host-specific recognition of cyst nematode CLE proteins - (Proceedings)
Wang, J., Replogle, A., Joshi, S., Korkin, D., Hussey, R., Baum, T., Davis, E., Wang, X., Mitchum, M.G. 2010. Cellular targeting and host-specific recognition of cyst nematode CLE proteins. International Congress on Molecular Plant-Microbe Interactions. 7:1.
Molecular characterization and functional analysis of ubiquitin extension genes from the potato cyst nematode Globodera rostochiensis - (Abstract Only)
Chronis, D., Yu, H., Lu, S., Wang, X. 2009. Molecular characterization and functional analysis of ubiquitin extension genes from the potato cyst nematode Globodera rostochiensis. Meeting Abstract. p. 41.
Control of Arabidopsis meristem development by thioredoxin-dependent regulation of intercellular transport - (Peer Reviewed Journal)
Benitez-Alfonso, Y., Cilia, M., San Roman, A., Thomas, C., Maule, A., Hearn, S., Jackson, D. 2009. Control of Arabidopsis meristem development by thioredoxin-dependent regulation of intercellular transport. Proceedings of the National Academy of Sciences. 106(9):3615-3620.
Similarity and functional analyses of expressed parasitism genes in Heterodera schachtii and Heterodera glycines - (Peer Reviewed Journal)
Patel, N., Hamamouch, N., Li, C., Hussey, R., Mitchum, M.G., Baum, T., Wang, X., Davis, E.L. 2008. Similarity and functional analyses of expressed parasitism genes in Heterodera schachtii and Heterodera glycines. Journal of Nematology. 40(4):299-310.
Barley Yellow Dwarf - (Literature Review)
(01-Nov-08)
Towards sustaining women through critical transition points in scientific careers: a workshop summary. - (Popular Publication)
Cilia, M. 2008. Towards sustaining women through critical transition points in scientific careers: a workshop summary.. Journal of Biomolecular Techniques. 19(5):353–355.
Positive Darwinian selection at single amino acid sites conferring plant virus resistance - (Peer Reviewed Journal)
Cavatorta, J., Savage, A., Yeam, I., Gray, S.M., Jahn, M. 2008. Positive Darwinian selection at single amino acid sites conferring plant virus resistance. Journal of Molecular Evolution. 67(5):551-559.
A Pest of Importance - (Trade Journal)
Wang, X. 2008. A Pest of Importance. American Vegetable Grower. Available: http://www.growingproduce.com/americanvegetablegrower/index.
Testing the physiological barriers to viral transmission in aphids using microinjection - (Peer Reviewed Journal)
Tamborindeguy, C., Gray, S.M., Jander, G. 2008. Testing the physiological barriers to viral transmission in aphids using microinjection. Journal of Visualized Experiments. Available: http://www.jove.com/details.php?id=700 doi: 10.3791/700. J Vis Exp. 15.
Root Growth Response to Application and Overexpression of Heterodera glycines CLE peptides - (Abstract Only)
Replogle, A., Wang, J., Wang, X., Davis, E.L., Mitchum, M.G. 2008. Root Growth Response to Application and Overexpression of Heterodera glycines CLE peptides. Phytopathology. 98:S132.
Soybean Cyst Nematode CLAVATA3/ESR-Like (CLE) Peptides: A Cross-Kingdom Adaptation for Plant Parasitism - (Proceedings)
Mitchum, M.G., Wang, X., Davis, E.L. 2008. Soybean Cyst Nematode CLAVATA3/ESR-Like (CLE) Peptides: A Cross-Kingdom Adaptation for Plant Parasitism. In: T.L. Niblack (Ed). Proceedings of the 4th National SCN Conference. National Soybean Cyst Nematode Conference, Urbana, IL. p. 29-33.
Impact of Potato virus Y on long term storage of potato - (Abstract Only)
Groves, R., Charkowski, A., Bussan, A., Gray, S.M. 2008. Impact of Potato virus Y on long term storage of potato. Phytopathology. 98:S62.
Emerging diversity in Potato virus Y poses new challenges for the U.S. potato industry - (Abstract Only)
Gray, S.M., Karasev, A., Lorenzen, J., Whitworth, J.L., Nolte, P., Perry, K. 2008. Emerging diversity in Potato virus Y poses new challenges for the U.S. potato industry. Phytopathology. 98:S61.
Molecular evolutionary analysis of resistance gene eIF4E and creation of novel resistance alleles in potato - (Abstract Only)
Cavatorta, J., Perez, K., Jahn, M., Gray, S.M. 2008. Molecular evolutionary analysis of resistance gene eIF4E and creation of novel resistance alleles in potato. Phytopathology. 98:S33.
Phloem limitation of potato leafroll virus is an asset not a liability - (Abstract Only)
Peter, K., Palukaitis, P., Bussan, A., Gray, S.M. 2008. Phloem limitation of potato leafroll virus is an asset not a liability. Phytopathology. 98:S124.
Analysis of Cyclophilin involvement in CYDV-RPV transmission by Schizaphis graminum - (Abstract Only)
Tamborindeguy, C., Gray, S.M. 2008. Analysis of Cyclophilin involvement in CYDV-RPV transmission by Schizaphis graminum. Phytopathology. 98:S154.
Functional characterization of CLE peptides from a plant-parasitic nematode Globodera rostochiensis - (Abstract Only)
Lu, S., Wang, J., Chen, S., Yu, H., Mitchum, M.G., Wang, X. 2008. Functional characterization of CLE peptides from a plant-parasitic nematode Globodera rostochiensis. American Society of Plant Biologists Annual Meeting. p. 55.
Potato cyst nematodes: pests of national importance - (Proceedings)
Wang, X. 2008. Potato cyst nematodes: pests of national importance. Empire State Fruit and Vegetable Expo. p. 30.
Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design - (Peer Reviewed Journal)
Ramsey,, J., Wilson,, A., De Vos,, M., Sun,, Q., Tamborindinguy,, C., Winfield,, A., Mallack,, G., Smith,, D., Fenton,, B., Gray, S.M., Jander,, G. 2007. Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design. Biomed Central (BMC) Genomics. 8:423.
Diverse and conserved roles of CLE peptides - (Review Article)
Mitchum,, M.G., Wang, X., Davis,, E.L. 2008. Diverse and conserved roles of CLE peptides. Current Opinion in Plant Biology. 11:75-81.
The naming of Potato virus Y strains infecting potato - (Peer Reviewed Journal)
Singh,, R.P., Valkonen,, J.T., Gray, S.M., Boonham,, N., Jones,, A.C., Kerlan,, C., Schubert,, J. 2008. The naming of Potato virus Y strains infecting potato. Archives of Virology. 153(1):1-13.
Coupling genetics and proteomics to identify aphid proteins associated with vector-specific transmission of Polerovirus (Luteoviridae) - (Peer Reviewed Journal)
Yang, X., Thannhauser, T.W., Burrows, M.E., Cox Foster, D., Gildow, F., Gray, S.M. 2008. Coupling genetics and proteomics to identify aphid proteins associated with vector-specific transmission of Polerovirus (Luteoviridae). Journal of Virology. 82:291-299.
Quantitative Detection of Double-Stranded RNA-Mediated Gene Silencing of Parasitism Genes in Heterodera glycines - (Peer Reviewed Journal)
Sukno, S.A., Mccuiston, J., Wong, M., Wang, X., Thon, M.R., Hussey, R., Baum, T., Davis, E. 2007. Quantitative Detection of Double-Stranded RNA-Mediated Gene Silencing of Parasitism Genes in Heterodera glycines. Journal of Nematology. 39:145-152.
Functional characterization of plant-parasitic cyst nematode CLE peptides - (Abstract Only)
Wang, J., Peplogle, A., Wang, X., Davis, E.L., Mitchum, M. 2007. Functional characterization of plant-parasitic cyst nematode CLE peptides. Plant Biology Annual Meeting.
Phenotypic characterization of roots responding to Heterodera glycines CLE peptides - (Abstract Only)
Replogle, A., Wang, J., Wang, X., Davis, E.L., Mitchum, M.G. 2007. Phenotypic characterization of roots responding to Heterodera glycines CLE peptides. Joint Meeting of the American Phytopathological Society and Society of Nematology.
Molecular characterization and functional analysis of venom allergen-like protein genes in the potato cyst nematode, Globodera rostochiensis - (Abstract Only)
Lu, S., Yu, H., Wang, X. 2007. Molecular characterization and functional analysis of venom allergen-like protein genes in the potato cyst nematode, Globodera rostochiensis. Joint Meeting of the American Phytopathological Society and Society of Nematology.
Phenotypic characterization of roots responding to Heterodera glycines CLE peptides - (Abstract Only)
Replogle, A., Wang, J., Wang, X., Davis, E.L., Mitchum, M.G. 2007. Phenotypic characterization of roots responding to Heterodera glycines CLE peptides. Phytopathology. 97:S98
Molecular characterization and functional analysis of venom allergen-like protein genes in the potato cyst nematode, Globodera rostochiensis - (Abstract Only)
Lu, S., Yu, H., Wang, X. 2007. Molecular characterization and functional analysis of venom allergen-like protein genes in the potato cyst nematode, Globodera rostochiensis. Phytopathology. 97:S67.
Molecular and functional characterization of parasitism genes of the potato cyst nematode Globodera rostochiensis - (Abstract Only)
Lu,, S., Yu,, H., Chen,, S., Wang, X. 2007. Molecular and functional characterization of parasitism genes of the potato cyst nematode Globodera rostochiensis. Journal of Nematology. 39:79.
Molecular and functional characterization of parasitism genes of the potato cyst nematode Globodera rostochiensis - (Abstract Only)
Lu, S., Yu, H., Chen, S., Wang, X. 2007. Molecular and functional characterization of parasitism genes of the potato cyst nematode Globodera rostochiensis. Joint Meeting of the American Phytopathological Society and Society of Nematology.
Small deletions in the potato leafroll virus readthrough protein affect particle morphology, aphid transmission, virus movement and accumulation - (Peer Reviewed Journal)
Peter,, K., Liang,, D., Palukaitis,, P., Gray, S.M. 2007. Small deletions in the potato leafroll virus readthrough protein affect particle morphology, aphid transmission, virus movement and accumulation. Journal of General Virology. 88:1821-1830.
Last Modified: 7/31/2014
Footer Content Back to Top of Page