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United States Department of Agriculture

Agricultural Research Service

Research Project: USING GENOMICS TO DEFINE AND CONTROL PARASITIC INFECTIONS IN CATTLE Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Qtl Mapping of Parasite Resistance Indicator Traits in An Experimental Angus Population - (Peer Reviewed Journal)
Kim, E., Sonstegard, T.S., Silva, M., Gasbarre, L.C., Van Tassell, C.P. 2013. QTL Mapping OF PARASITE RESISTANCE INDICATOR traits IN AN EXPERIMENTAL ANGUS POPULATION. Animal Genetics. DOI: 10.1111/age.12101.
Quantitative trait loci for resistance to Haemonchus contortus under artificial challenge in Red Maasai and Dorper sheep of East Africa - (Peer Reviewed Journal)
Marshall, K., Nagda, S., Gibson, J.P., Sonstegard, T.S., Hanotte, O., Silva, M.V., Baker, L., Van Tassell, C.P. 2013. Quantitative trait loci for resistance to Haemonchus contortus under artificial challenge in Red Maasai and Dorper sheep of East Africa. Animal Genetics. 44(3):285-295.
Micro array analysis of the intestinal host response in Giardia duodenalis assemblage E infected cattle - (Peer Reviewed Journal)
Dreesen, L., Rinaldi, M., Chiers, K., Li, R.W., Geurden, T., Van Den Broeck, W., Goddeeris, B., Vercruysse, J., Claerebout, E., Geldhof, P. 2012. Micro array analysis of the intestinal host response in Giardia duodenalis assemblage E infected cattle. PLoS One. 7(7):e40985.
Exploring the host transcriptome for mechanisms underlying protective immunity and resistance to helminth infection in ruminants - (Review Article)
Li, R.W., Choudhary, R.K., Capuco, A.V., Urban, Jr., J.F. 2012. Exploring the host transcriptome for mechanisms underlying protective immunity and resistance to helminth infection in ruminants. Veterinary Parasitology. 190(1-2):1-11.
Alternate splicing regulated by butyrate in the bovine epithelial cell - (Peer Reviewed Journal)
Wu, S., Li, C., Huang, W., Li, W., Li, R.W. 2012. Alternate splicing regulated by butyrate in the bovine epithelial cell. PLoS One. 7(6):e39182.
Alterations in the Porcine Colon Microbiota Induced by the Gastrointestinal Nematode Trichuris suis - (Peer Reviewed Journal)
Li, R.W., Wu, S., Li, W., Hill, D.E., Urban, Jr., J.F., Navarro, K., Couch, R.D. 2012. Alterations in the Porcine Colon Microbiota Induced by the Gastrointestinal Nematode Trichuris suis. Infection and Immunity. 80(6):2150-2157.
Worm burden-dependent disruption of the porcine colon microbiota by Trichuris suis infection - (Peer Reviewed Journal)
Wu, S., Li, R.W., Li, W., Urban Jr, J.F., Dawson, H.D., Beshah, E. 2012. Worm burden-dependent disruption of the porcine colon microbiota by Trichuris suis infection. PLoS One. 7(4):e35470.
Chimeric classical swine fever (CSF)-Japanese encephalitis (JE) viral particles as a non-transmissible bivalent marker vaccine candidate against CSF and JE infections - (Peer Reviewed Journal)
Yang, Z., Wu, R., Li, L., Xiong, Z., Zhao, H., Li, R.W., Guo, D., Pan, Z. 2012. Chimeric classical swine fever (CSF)-Japanese encephalitis (JE) viral particles as a non-transmissible bivalent marker vaccine candidate against CSF and JE infections. Virus Research. 165(1):61-70.
The IGF2 Locus - (Peer Reviewed Journal)
Li, R.W., Sperling, A.K. 2013. The IGF2 Locus. Journal of Clinical Microbiology. 51(7):2435-2438.
Repetitive Sequences - (Book / Chapter)
Sperling, A.K., Li, R.W. 2013. Repetitive Sequences.In: Brenner's Encyclopedia of Genetics (Eds. S. Maloy and V. Houghes), Academic press, San Diego, pp.150-154.
Cytoskeleton remodling and alterations in smooth muscle contractility in the bovine jejunum during the early stage of Cooperia oncophora infection - (Peer Reviewed Journal)
Li, R.W., Schroeder, S.G. 2011. Cytoskeleton remodling and alterations in smooth muscle contractility in the bovine jejunum during the early stage of Cooperia oncophora infection. Functional and Integrative Genomics. 12(1):35-44.
Characterization of the abomasal transcriptome for mechanisms of resistance to gastrointestinal nematodes in cattle - (Peer Reviewed Journal)
Li, R.W., Rinaldi, M., Capuco, A.V. 2011. Characterization of the abomasal transcriptome for mechanisms of resistance to gastrointestinal nematodes in cattle. Veterinary Research. 42(1):114.
Drug Resistance - (Book / Chapter)
Li, R.W., Sperling, A.K. 2013. Drug Resistance. In: Brenner's Encyclopedia of Genetics. Ed. S. Maloy and K. Hughes. Academic press, San Diego, pp. 418-420.
Galectin-11 induction in the gastrointestinal tract of cattle following nematode and protozoan infections - (Peer Reviewed Journal)
Hoorens, P., Rinaldi, M., Mihi, B., Dreseen, L., Grit, G., Meeusen, E., Li, R.W., Geldhof, P. 2011. Galectin-11 induction in the gastrointestinal tract of cattle following nematode and protozoan infections. Parasite Immunology. 33:669–678.
Metagenome plasticity of the bovine abomasal microbiota in immune animals in response to Ostertagia ostertagi infection - (Peer Reviewed Journal)
Li, R.W., Huang, Y., Gasbarre, L. 2011. Metagenome plasticity of the bovine abomasal microbiota in immune animals in response to Ostertagia ostertagi infection. PLoS One. 6:e24417.
Genome-Wide Association Analysis for Feed Efficiency in Angus Cattle - (Peer Reviewed Journal)
(07-Jul-11)
Characterization of the rumen microbiota in pre-ruminant calves using metagenomic tools - (Peer Reviewed Journal)
Li, R.W., Connor, E.E., Li, C., Baldwin, R.L., Sparks, M. 2011. Characterization of the rumen microbiota in pre-ruminant calves using metagenomic tools. Environmental Microbiology. 14(1):129-139.
Infection with the gastrointestinal nematode Ostertagia ostertagi affects mucus biosynthesis in the abomasum of cattle - (Peer Reviewed Journal)
Rinaldi, M., Dreesen, L., Hoorens, P., Li, R.W., Claerebout, E., Goddeeris, B., Vercruysse, J., Vandenbroeck, W., Geldhof, P. 2011. Infection with the gastrointestinal nematode Ostertagia ostertagi affects mucus biosynthesis in the abomasum of cattle. Veterinary Research. 42(1):61.
The vitamin D receptor and inducible nitric oxide synthase associated pathways in the development of acquired resistance to Cooperia oncophora infection in cattle - (Peer Reviewed Journal)
Li, R.W., Li, C., Gasbarre, L.C. 2011. The vitamin D receptor and inducible nitric oxide synthase associated pathways in the development of acquired resistance to Cooperia oncophora infection in cattle. Veterinary Research. 42(1):48.
Genome wide analysis of the bovine mucin genes and their gastrointestinal transcription profile - (Peer Reviewed Journal)
Hoorens, P.R., Rinaldi, M., Li, R.W., Goddeeris, B., Claerebout, E., Vercruysse, J., Geldhof, P. 2011. Genome wide analysis of the bovine mucin genes and their gastrointestinal transcription profile. Biomed Central (BMC) Genomics. 12:140.
Characterization of microsatellite loci in the SLA class I region - (Peer Reviewed Journal)
Mcclure, M.C., Chung, H.Y. 2010. Characterization of microsatellite loci in the SLA class I region. Genomics. 97:233-234.
A calcium-activated apyrase from Teladorsagia circumcincta: an excretory/secretory antigen capable of modulating host immune responses? - (Peer Reviewed Journal)
Nisbet, A.J., Zarlenga, D.S., Knox, D.P., Meikle, L.I., Wildblood, L.A., Matthews, J.B. 2011. A calcium-activated apyrase from Teladorsagia circumcincta: an excretory/secretory antigen capable of modulating host immune responses? Parasite Immunology. 33:236-243.
Localized complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle - (Peer Reviewed Journal)
Li, R.W., Hou, Y., Li, C., Gasbarre, L.C. 2010. Localized complement activation in the development of protective immunity against Ostertagia ostertagi infections in cattle. Veterinary Parasitology. 174(3-4):247-256.
Mastitis associated transcriptomic disruptions in cattle - (Review Article)
Rinaldi, M., Li, R.W., Capuco, A.V. 2010. Mastitis associated transcriptomic disruptions in cattle. Veterinary Immunology and Immunopathology. 138(4):267-279.
A calcium-activated nucleotidase secreted from Ostertagia ostertagi fourth stage larvae is a member of the novel salivary apyrases present in blood-feeding arthropods - (Peer Reviewed Journal)
Zarlenga, D.S., Gasbarre, L.C., Nisbet, A.J., Garrett, W.M. 2010. A calcium-activated nucleotidase secreted from Ostertagia ostertagi fourth stage larvae is a member of the novel salivary apyrases present in blood-feeding arthropods. Parasitology. 138:333-243.
Naming genes beyond Caenorhabditis - (Experiment Station)
Beech, R., Zarlenga, D.S., Bird, D., Berriman, M., Dent, J. 2010. Naming genes beyond Caenorhabditis [abstract]. The Worm Breeder's Gazette. 18(2):17.
The Effects of Increased Milking Frequency on Metabolism and Mammary Cell Proliferation in Holstein Dairy Cows     Reprint Icon - (Peer Reviewed Journal)
Soberon, F., Lukas, J.L., Vanamburgh, M.E., Capuco, A.V., Galton, D.M., Overton, T.R. 2010. The effects of increased milking frequency on metabolism and mammary cell proliferation in holstein dairy cows. Journal of Dairy Science. 93:565-573.
Age, Segment, and Horn Disease Affect Expression of Cytokines, Growth Factors and Receptors in the Epidermis and Dermis of the Bovine Claw - (Peer Reviewed Journal)
Mills, J.A., Zarlenga, D.S., Habecker, P.L., Dyer, R.M. 2009. Age, segment, and horn disease affect expression of cytokines, growth factors and receptors in the epidermis and dermis of the bovine claw. Journal of Dairy Science. 92:5977-5987.
Mucin biosynthesis in the bovine goblet cell induced by Cooperia oncophora infection     Reprint Icon - (Peer Reviewed Journal)
Li, R.W., Li, C., Elsasser, T.H., Liu, G., Garrett, W.M., Gasbarre, L.C. 2009. Mucin biosynthesis in the bovine goblet cell induced by Cooperia oncophora infection. Veterinary Parasitology. PMID 19647371.
From parasite genomes to one healthy world; are we having fun yet? - (Peer Reviewed Journal)
Zarlenga, D.S., Gasbarre, L.C. 2009. From parasite genomes to one healthy world; are we having fun yet? Veterinary Parasitology. 163:235-249.
The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi - (Peer Reviewed Journal)
Abubucker, S., Zarlenga, D.S., Martin, J., Yin, Y., Wang, Z., Mccarter, J.P., Gasbarre, L.C., Wilson, R.K., Mitreva, M. 2009. The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi. Veterinary Parasitology. 162:89-99.
Coronette Keratinocyte Colony Formation Is Supported by Epidermal-Dermal Cell Interactions in the Bovine Claw - (Peer Reviewed Journal)
Zarlenga, D.S., Mills, J., Dyer, R. 2009. CORONETTE KERATINOCYTE COLONY FORMATION IS SUPPORTED BY EPIDERMAL-DERMAL CELL INTERACTIONS IN THE BOVINE CLAW. Journal of Dairy Science. 92:1913-1923.
A temporal shift in regulatory networks and pathways in the bovine small intestine during Cooperia oncophora infection     Reprint Icon - (Peer Reviewed Journal)
Li, R.W., Gasbarre, L.C. 2009. A temporal shift in regulatory networks and pathways in the bovine small intestine during Cooperia oncophora infection. International Journal for Parasitology. 39:813-824.
Predicion of total genetic value using a 50K SNP chip in Holstein breed - (Abstract Only)
Silva, M.V., Van Tassell, C.P., Sonstegard, T.S., Matukumalli, L., Van Raden, P.M., Wiggans, G.R. 2008. Predicion of total genetic value using a 50K SNP chip in Holstein breed. Brazilian Animal Science Society.
Effects of butyrate on the expression of insulin-like growth factor binding proteins in bovine kidney epithelial cells - (Peer Reviewed Journal)
Li, R.W., Li, C. 2008. Effects of butyrate on the expression of insulin-like growth factor binding proteins in bovine kidney epithelial cells. The Open Veterinary Science Journal. 2:1-6.
Quantitative Trait Loci Associated with Parasitic Infection in Angus Breed - (Abstract Only)
Silva, M.V., Van Tassell, C.P., Sonstegard, T.S., Gasbarre, L.C. 2008. Quantitative trait loci associated with parasitic infection in angus breed . Plant and Animal Genome Conference Proceedings.
The Phylogeny and Genome of Trichinella Species - (Abstract Only)
Zarlenga, D.S., Makedonka, M., Rosenthal, B.M., Hoberg, E.P. 2007. The phylogeny and genome of trichinella species. Meeting Abstract.
A calcium-dependent, structural homologue of a novel salivary apyrase from blood-feeding arthropods has been identified in Ostertagia third stage larvae - (Abstract Only)
Zarlenga, D.S., Gasbarre, L.C. 2007. A calcium-dependent, structural homologue of a novel salivary apyrase from blood-feeding arthropods has been identified in Ostertagia third stage larvae. World Association for the Advancement of Veterinary Parasitologists. pp.65
Parasitic Nematodes - From Genomes to Control - (Proceedings)
Mitreva, M., Zarlenga, D.S., Mccarter, J.P., Jasmer, D.P. 2007. Parasitic Nematodes - From Genomes to Control. Veterinary Parasitology. 148(1)31-42.
Last Modified: 12/18/2014
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