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United States Department of Agriculture

Agricultural Research Service

Research Project: IMPACT OF DIET AND GUT MICROBIAL ECOLOGY ON FOODBORNE BACTERIAL PATHOGENS AND ANTIMICROBIAL RESISTANCE IN FARM ANIMALS Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

In-feed antibiotic effects on the swine intestinal microbiome - (Peer Reviewed Journal)
Looft, T.P., Johnson, T., Allen, H.K., Bayles, D.O., Alt, D.P., Cole, J., Hashsham, S., Stedtfeld, R., Stedtfeld, T., Chai, B., Tiedje, J., Stanton, T.B. 2012. In-feed antibiotic effects on the swine intestinal microbiome. Proceedings of the National Academy of Sciences. 109(5):1691-1696.
The persistence of antibiotic resistance: evaluation of a probiotic approach using antibiotic-sensitive M. elsdenii strains to prevent colonization of swine by antibiotic-resistant strains - (Peer Reviewed Journal)
Stanton, T.B., Humphrey, S.B. 2011. Persistence of antibiotic resistance: evaluation of a probiotic approach using antibiotic-sensitive M. elsdenii strains to prevent colonization of swine by antibiotic-resistant strains. Applied and Environmental Microbiology. 77(20):7158-7166.
Isolation and Laboratory Maintenance of Brachyspira Species - (Book / Chapter)
(10-Feb-11)
Agriculture's Impact on Microbial Diversity and Associated Fluxes of Carbon Dioxide and Methane - (Peer Reviewed Journal)
Levine, U.Y., Teal, T.K., Robertson, G.P., Schmidt, T.M. 2011. Agriculture's impact on microbial diversity and associated fluxes of carbon dioxide and methane. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. Available: http://www.nature.com/ismej/journal/vaop/ncurrent/full/ismej201140a.html.
Selective culturing of swine gastrointestinal bacteria on substrates simulating the intestinal mucosa - (Abstract Only)
Looft, T.P., Stanton, T.B. 2010. Selective culturing of swine gastrointestinal bacteria on substrates simulating the intestinal mucosa [abstract]. 3rd ASM Beneficial Microbes Meeting. p. 35.
Are Proteomic Technologies Ready for IVDs? - (Review Article)
Tabatabai, L.B., Zimmerli, M.K. 2010. Are proteomic technologies ready for IVDs? In Vitro Diagnostic Technology. Fall 2010:10-15.
Diverse Phage in the Swine Intestine - (Abstract Only)
(02-May-10)
Metagenomic and 16S rRNA Analyses of Fecal Bacteria of Swine Given Diets Containing Antibiotics - (Abstract Only)
(02-May-10)
Psychrotrophic Strain of Janthinobacterium lividum from a Cold Alaskan Soil Produces Prodigiosin - (Peer Reviewed Journal)
Schloss, P.D., Allen, H.K., Klimowicz, A.K., Mlot, C., Gross, J.A., Savengsuksa, S., Mcellin, J., Clardy, J., Ruess, R.W., Handelsman, J. 2010. Psychrotrophic Strain of Janthinobacterium lividum from a Cold Alaskan Soil Produces Prodigiosin. DNA and Cell Biology. 29(9):533-541.
Investigating the Overlooked Genomes That Impact Animal Health: The Gut Microbiome - (Abstract Only)
(15-Mar-10)
Swine Intestinal Tract Harbors a High Diversity of Butyrate-Producing Bacteria - (Abstract Only)
(11-Mar-10)
Characteristics and Induction of VSH-1, Gene Transfer Agent of B. hyodysenteriae - (Abstract Only)
Stanton, T.B., Humphrey, S.B., Zuerner, R.L. 2009. Characteristics and Induction of VSH-1, Gene Transfer Agent of B. hyodysenteriae [abstract]. In: Proceedings of 5th International Conference on Colonic Spirochaetal Infections in Animals and Humans, June 8-10, 2009, Leon, Spain. p.25-26.
Antibiotic Resistant Microbiota in the Swine Intestinal Tract - (Abstract Only)
Stanton, T.B. 2009. Antibiotic Resistant Microbiota in the Swine Intestinal Tract [abstract]. Conference on Food Safety and Public Health Frontier: Minimizing Antibiotic Resistance Transmission through the Food Chain. Paper No.S1.
Identification of a Divided Genome for VSH-1, the Prophage-Like Gene Transfer Agent of Brachyspira hyodysenteriae - (Peer Reviewed Journal)
Stanton, T.B., Humphrey, S.B., Bayles, D.O., Zuerner, R.L. 2008. Identification of a Divided Genome for VSH-1, the Prophage-Like Gene Transfer Agent of Brachyspira hyodysenteriae. Journal of Bacteriology. 191(5):1719-1721.
Bhmp39 Proteins of B. Hyodysenteriae Form High Molecular Weight Complexes - (Abstract Only)
Witchell, T., Bulach, D., Hoke, D., Driesen, S., Stanton, T.B., Zuerner, R.L., Cordwell, S., Adler, B. 2008. Bhmp39 proteins of B. hyodysenteriae form high molecular weight complexes [abstract]. Australian Society for Microbiology. p.04.39.
Collateral Effects of Antibiotics - Carbadox and Metronidazole Induce Vsh-1 and Facilitate Gene Transfer among Brachyspira Hyodysenteriae Strains - (Peer Reviewed Journal)
Stanton, T.B., Humphrey, S.B., Sharma, V.K., Zuerner, R.L. 2008. Collateral effects of antibiotics - carbadox and metronidazole induce VSH-1 and facilitate gene transfer among Brachyspira hyodysenteriae strains. Applied and Environmental Microbiology. 74(10):2950-2956.
Induction and Transcription of Vsh-1, a Prophage-Like, Gene Transfer Agent of Brachyspira Hyodysenteriae - (Peer Reviewed Journal)
Matson, E.G., Zuerner, R.L., Stanton, T.B. 2007. Induction and transcription of VSH-1, a prophage-like, gene transfer agent of Brachyspira hyodysenteriae. Anaerobe. 13(2):89-97.
P10 Alternative Uses and Collateral Effects of Antimicrobials - (Abstract Only)
Stanton, T.B. 2007. P10 alternative uses and collateral effects of antimicrobials [abstract]. American Society for Microbiology Branch Meeting. p. 10
Prophage-Like Gene Transfer Agents - Novel Mechanisms of Gene Exchange for Methanococcus, Desulfovibrio, Brachyspira, and Rhodobacter Species - (Peer Reviewed Journal)
Stanton, T.B. 2007. Prophage-like gene transfer agents-novel mechanisms of gene exchange for Methanococcus, Desulfovibrio, Brachyspira, and Rhodobacter species. Anaerobe. 13(2):43-49.
Salmonella Colonization and Microbial Fermentation in the Turkey Crop - (Other)
Cutler, S., Rasmussen, M.A., Scanes, C. 2006. Salmonella colonization and microbial fermentation in the turkey crop. Feedinfo News Service. Available: http://www.feedinfo.com.
Tales of the Crypt(ics): Lateral Gene Transfer by 'defective' Prophages - (Abstract Only)
Stanton, T.B. Tales of the crypt(ics): Lateral gene transfer by 'defective' prophages [abstract]. American Society of Microbiology - Missouri Branch. p.7.
Antimicrobial Collateral Effects: Induction of the Prophage-Like, Gene Transfer Agent Vsh-1 in Cultures of the Swine Pathogen Brachypsira Hyodysenteriae - (Abstract Only)
Stanton, T.B., Sharma, V.K., Humphrey, S.B., Zuerner, R.L. 2006. Antimicrobial collateral effects: Induction of the prophage-like, gene transfer agent VSH-1 in cultures of the swine pathogen Brachypsira hyodysenteriae [abstract]. American Society for Microbiology. May 20-26, 2006, Orlando, Florida. 2006 CDROM.
Last Modified: 12/22/2014
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